RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 DDRGK1Q96HY6 314 aa19.25■□□□□ 0.67
THUMPD3-210ENST00000515662 COL14A1Q05707 1796 aaKnown RBP19.25■□□□□ 0.67
THUMPD3-210ENST00000515662 UBTFL1P0CB47 393 aaPredicted RBP19.25■□□□□ 0.67
THUMPD3-210ENST00000515662 LRRFIP2Q9Y608 721 aaKnown RBP19.25■□□□□ 0.67
THUMPD3-210ENST00000515662 BMP2KLQ5H9B9 411 aa19.24■□□□□ 0.67
THUMPD3-210ENST00000515662 FMNL2Q96PY5 1086 aa19.24■□□□□ 0.67
THUMPD3-210ENST00000515662 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
THUMPD3-210ENST00000515662 ATP8B2P98198 1209 aa19.24■□□□□ 0.67
THUMPD3-210ENST00000515662 KSR2Q6VAB6 950 aa19.24■□□□□ 0.67
THUMPD3-210ENST00000515662 ERVV-2B6SEH9 535 aa19.23■□□□□ 0.67
THUMPD3-210ENST00000515662 MAP3K2Q9Y2U5 619 aa19.22■□□□□ 0.67
THUMPD3-210ENST00000515662 COL16A1Q07092 1604 aaPredicted RBP19.22■□□□□ 0.67
THUMPD3-210ENST00000515662 DDX54Q8TDD1 881 aaKnown RBP19.22■□□□□ 0.67
THUMPD3-210ENST00000515662 PNMA6EA0A0J9YXQ4 647 aa19.21■□□□□ 0.67
THUMPD3-210ENST00000515662 PLEKHM2Q8IWE5 1019 aa19.21■□□□□ 0.67
THUMPD3-210ENST00000515662 GLI3P10071 1580 aa19.21■□□□□ 0.67
THUMPD3-210ENST00000515662 USP35Q9P2H5 1018 aa19.21■□□□□ 0.67
THUMPD3-210ENST00000515662 UPF2Q9HAU5 1272 aaKnown RBP19.2■□□□□ 0.66
THUMPD3-210ENST00000515662 USP16Q9Y5T5 823 aa19.2■□□□□ 0.66
THUMPD3-210ENST00000515662 SMARCA5O60264 1052 aaPredicted RBP19.2■□□□□ 0.66
THUMPD3-210ENST00000515662 DDX58O95786 925 aaKnown RBP19.2■□□□□ 0.66
THUMPD3-210ENST00000515662 C16orf71Q8IYS4 520 aaPredicted RBP19.2■□□□□ 0.66
THUMPD3-210ENST00000515662 APBB1O00213 710 aa19.19■□□□□ 0.66
THUMPD3-210ENST00000515662 ALDH1L1O75891 902 aa19.19■□□□□ 0.66
THUMPD3-210ENST00000515662 NBPF7P0C2Y1 421 aaPredicted RBP19.19■□□□□ 0.66
THUMPD3-210ENST00000515662 DEKP35659 375 aaKnown RBP19.19■□□□□ 0.66
THUMPD3-210ENST00000515662 PHLPP1O60346 1717 aa19.19■□□□□ 0.66
THUMPD3-210ENST00000515662 AIMP1Q12904 312 aaKnown RBP19.18■□□□□ 0.66
THUMPD3-210ENST00000515662 MYL6BP14649 208 aa19.18■□□□□ 0.66
THUMPD3-210ENST00000515662 TBC1D32Q96NH3 1257 aa19.18■□□□□ 0.66
THUMPD3-210ENST00000515662 PAPPAQ13219 1627 aa19.17■□□□□ 0.66
THUMPD3-210ENST00000515662 LRP10Q7Z4F1 713 aa19.17■□□□□ 0.66
THUMPD3-210ENST00000515662 OTUD7AQ8TE49 926 aaPredicted RBP19.17■□□□□ 0.66
THUMPD3-210ENST00000515662 EXOC6BQ9Y2D4 811 aa19.17■□□□□ 0.66
THUMPD3-210ENST00000515662 LAMB4A4D0S4 1761 aa19.17■□□□□ 0.66
THUMPD3-210ENST00000515662 UBR2Q8IWV8 1755 aa19.17■□□□□ 0.66
THUMPD3-210ENST00000515662 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
THUMPD3-210ENST00000515662 SSH3Q8TE77 659 aa19.17■□□□□ 0.66
THUMPD3-210ENST00000515662 LINS1Q8NG48 757 aa19.16■□□□□ 0.66
THUMPD3-210ENST00000515662 XAGE3Q8WTP9 111 aa19.16■□□□□ 0.66
THUMPD3-210ENST00000515662 KCPQ6ZWJ8 1503 aa19.16■□□□□ 0.66
THUMPD3-210ENST00000515662 IBTKQ9P2D0 1353 aaPredicted RBP19.16■□□□□ 0.66
THUMPD3-210ENST00000515662 POLA2Q14181 598 aa19.15■□□□□ 0.66
THUMPD3-210ENST00000515662 TOGARAM1Q9Y4F4 1720 aa19.15■□□□□ 0.66
THUMPD3-210ENST00000515662 GSPT1P15170 499 aaKnown RBP19.15■□□□□ 0.66
THUMPD3-210ENST00000515662 CWF19L2Q2TBE0 894 aaKnown RBP19.15■□□□□ 0.66
THUMPD3-210ENST00000515662 TTC22Q5TAA0 569 aa19.15■□□□□ 0.66
THUMPD3-210ENST00000515662 COPS6Q7L5N1 327 aa19.15■□□□□ 0.66
THUMPD3-210ENST00000515662 PPP1R42Q7Z4L9 355 aa19.15■□□□□ 0.66
THUMPD3-210ENST00000515662 RIC3Q7Z5B4 369 aa19.14■□□□□ 0.66
THUMPD3-210ENST00000515662 MFAP1P55081 439 aaKnown RBP19.14■□□□□ 0.65
THUMPD3-210ENST00000515662 PLCH1Q4KWH8 1693 aa19.14■□□□□ 0.65
THUMPD3-210ENST00000515662 TNS2Q63HR2 1409 aa19.14■□□□□ 0.65
THUMPD3-210ENST00000515662 LRRCC1Q9C099 1032 aa19.13■□□□□ 0.65
THUMPD3-210ENST00000515662 C9orf78Q9NZ63 289 aaPredicted RBP19.13■□□□□ 0.65
THUMPD3-210ENST00000515662 TOM1O60784 492 aa19.12■□□□□ 0.65
THUMPD3-210ENST00000515662 PIP4K2AP48426 406 aaPredicted RBP19.12■□□□□ 0.65
THUMPD3-210ENST00000515662 UTYO14607 1347 aa19.12■□□□□ 0.65
THUMPD3-210ENST00000515662 ERBB4Q15303 1308 aa19.12■□□□□ 0.65
THUMPD3-210ENST00000515662 SRGAP3O43295 1099 aa19.12■□□□□ 0.65
THUMPD3-210ENST00000515662 IGKV5-2P06315 115 aa19.12■□□□□ 0.65
THUMPD3-210ENST00000515662 TMOD3Q9NYL9 352 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 HDAC5Q9UQL6 1122 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 GRM8O00222 908 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 ADAMTS2O95450 1211 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 PIP4K2BP78356 416 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 MTX1Q13505 466 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 TBC1D9Q6ZT07 1266 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 ANKRD13DQ6ZTN6 518 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 METTL22Q9BUU2 404 aaPredicted RBP19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 C22orf23Q9BZE7 217 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 OSBPL3Q9H4L5 887 aa19.11■□□□□ 0.65
THUMPD3-210ENST00000515662 NEXNQ0ZGT2 675 aa19.1■□□□□ 0.65
THUMPD3-210ENST00000515662 PTCD1O75127 700 aaKnown RBP19.1■□□□□ 0.65
THUMPD3-210ENST00000515662 CDC45O75419 566 aa19.1■□□□□ 0.65
THUMPD3-210ENST00000515662 SALL3Q9BXA9 1300 aa19.09■□□□□ 0.65
THUMPD3-210ENST00000515662 NEURL1BA8MQ27 555 aa19.09■□□□□ 0.65
THUMPD3-210ENST00000515662 NBPF26B4DH59 902 aa19.09■□□□□ 0.65
THUMPD3-210ENST00000515662 NBPF14Q5TI25 921 aa19.09■□□□□ 0.65
THUMPD3-210ENST00000515662 NBPF10Q6P3W6 841 aaKnown RBP19.09■□□□□ 0.65
THUMPD3-210ENST00000515662 NBPF15Q8N660 670 aa19.09■□□□□ 0.65
THUMPD3-210ENST00000515662 WNK3Q9BYP7 1800 aa19.09■□□□□ 0.65
THUMPD3-210ENST00000515662 RAB11FIP3O75154 756 aa19.08■□□□□ 0.65
THUMPD3-210ENST00000515662 SURF6O75683 361 aaKnown RBP19.08■□□□□ 0.65
THUMPD3-210ENST00000515662 SLC4A3P48751 1232 aa19.08■□□□□ 0.65
THUMPD3-210ENST00000515662 PDE1AP54750 535 aa19.08■□□□□ 0.65
THUMPD3-210ENST00000515662 DAXXQ9UER7 740 aaPredicted RBP19.08■□□□□ 0.65
THUMPD3-210ENST00000515662 NRAPQ86VF7 1730 aa19.08■□□□□ 0.65
THUMPD3-210ENST00000515662 MYD88Q99836 296 aa19.08■□□□□ 0.64
THUMPD3-210ENST00000515662 PIGBQ92521 554 aa19.07■□□□□ 0.64
THUMPD3-210ENST00000515662 EXOC5O00471 708 aa19.07■□□□□ 0.64
THUMPD3-210ENST00000515662 SDSP20132 328 aa19.07■□□□□ 0.64
THUMPD3-210ENST00000515662 GCKRQ14397 625 aa19.07■□□□□ 0.64
THUMPD3-210ENST00000515662 PLBD2Q8NHP8 589 aa19.06■□□□□ 0.64
THUMPD3-210ENST00000515662 KAZALD1Q96I82 304 aa19.06■□□□□ 0.64
THUMPD3-210ENST00000515662 SUCLG2Q96I99 432 aa19.06■□□□□ 0.64
THUMPD3-210ENST00000515662 ARFGEF2Q9Y6D5 1785 aa19.06■□□□□ 0.64
THUMPD3-210ENST00000515662 LRP6O75581 1613 aa19.06■□□□□ 0.64
THUMPD3-210ENST00000515662 NUTM2BA6NNL0 878 aaPredicted RBP19.05■□□□□ 0.64
THUMPD3-210ENST00000515662 NUTM2EB1AL46 878 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms