RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
TSPAN17-208ENST00000514705 DNM1Q05193 864 aaKnown RBP16.55■□□□□ 0.24
TSPAN17-208ENST00000514705 FSD1Q9BTV5 496 aa16.55■□□□□ 0.24
TSPAN17-208ENST00000514705 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 RNF20Q5VTR2 975 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 C16orf45Q96MC5 204 aaPredicted RBP16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 DIP2CQ9Y2E4 1556 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 TPM3P06753 285 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 TCEANC2Q96MN5 208 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 SIL1Q9H173 461 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 ZFYVE9O95405 1425 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 IQGAP1P46940 1657 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 IGSF3O75054 1194 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 ANAPC15P60006 121 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 MAP3K11Q16584 847 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 ZDHHC9Q9Y397 364 aa16.54■□□□□ 0.24
TSPAN17-208ENST00000514705 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 RTL1A6NKG5 1358 aa16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 IBTKQ9P2D0 1353 aaPredicted RBP16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 AK2P54819 239 aa16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 SF3A1Q15459 793 aaKnown RBP16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 UVSSAQ2YD98 709 aa16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 KIF1BPQ96EK5 621 aa16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 INTS4Q96HW7 963 aaKnown RBP16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 ANXA1P04083 346 aa16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 TERF1P54274 439 aa16.53■□□□□ 0.24
TSPAN17-208ENST00000514705 TAF7Q15545 349 aaPredicted RBP16.52■□□□□ 0.24
TSPAN17-208ENST00000514705 SPATA32Q96LK8 384 aa16.52■□□□□ 0.24
TSPAN17-208ENST00000514705 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.24
TSPAN17-208ENST00000514705 CHL1O00533 1208 aa16.52■□□□□ 0.24
TSPAN17-208ENST00000514705 SYT1P21579 422 aa16.52■□□□□ 0.24
TSPAN17-208ENST00000514705 ATP8B2P98198 1209 aa16.52■□□□□ 0.24
TSPAN17-208ENST00000514705 ABCA6Q8N139 1617 aa16.52■□□□□ 0.24
TSPAN17-208ENST00000514705 ACEP12821 1306 aa16.52■□□□□ 0.24
TSPAN17-208ENST00000514705 PDCP20941 246 aa16.52■□□□□ 0.23
TSPAN17-208ENST00000514705 MTHFSDQ2M296 383 aaKnown RBP16.52■□□□□ 0.23
TSPAN17-208ENST00000514705 AACSQ86V21 672 aa16.52■□□□□ 0.23
TSPAN17-208ENST00000514705 SPHKAPQ2M3C7 1700 aa16.51■□□□□ 0.23
TSPAN17-208ENST00000514705 FILIP1Q7Z7B0 1213 aa16.51■□□□□ 0.23
TSPAN17-208ENST00000514705 USHBP1Q8N6Y0 703 aa16.51■□□□□ 0.23
TSPAN17-208ENST00000514705 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
TSPAN17-208ENST00000514705 HDAC5Q9UQL6 1122 aa16.51■□□□□ 0.23
TSPAN17-208ENST00000514705 KIDINS220Q9ULH0 1771 aa16.51■□□□□ 0.23
TSPAN17-208ENST00000514705 RAB11FIP3O75154 756 aa16.51■□□□□ 0.23
TSPAN17-208ENST00000514705 PSMA5P28066 241 aa16.51■□□□□ 0.23
TSPAN17-208ENST00000514705 RNF17Q9BXT8 1623 aaKnown RBP16.51■□□□□ 0.23
TSPAN17-208ENST00000514705 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 GNAT3A8MTJ3 354 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 F13A1P00488 732 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 CADPS2Q86UW7 1296 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 CCDC112Q8NEF3 446 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 ZNF853P0CG23 659 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 BLOC1S2Q6QNY1 142 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 NLRP2Q9NX02 1062 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
TSPAN17-208ENST00000514705 C1orf141Q5JVX7 400 aa16.49■□□□□ 0.23
TSPAN17-208ENST00000514705 FAM173BQ6P4H8 233 aa16.49■□□□□ 0.23
TSPAN17-208ENST00000514705 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
TSPAN17-208ENST00000514705 KDM4AO75164 1064 aa16.49■□□□□ 0.23
TSPAN17-208ENST00000514705 GLRX3O76003 335 aaKnown RBP16.49■□□□□ 0.23
TSPAN17-208ENST00000514705 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
TSPAN17-208ENST00000514705 ZSCAN31Q96LW9 406 aaPredicted RBP16.49■□□□□ 0.23
TSPAN17-208ENST00000514705 CLEC17AQ6ZS10 378 aa16.48■□□□□ 0.23
TSPAN17-208ENST00000514705 CCDC73Q6ZRK6 1079 aa16.48■□□□□ 0.23
TSPAN17-208ENST00000514705 KIF1BO60333 1816 aa16.48■□□□□ 0.23
TSPAN17-208ENST00000514705 MYRIPQ8NFW9 859 aa16.48■□□□□ 0.23
TSPAN17-208ENST00000514705 PIBF1Q8WXW3 757 aa16.48■□□□□ 0.23
TSPAN17-208ENST00000514705 CCDC186Q7Z3E2 898 aa16.48■□□□□ 0.23
TSPAN17-208ENST00000514705 PDLIM2Q96JY6 352 aa16.47■□□□□ 0.23
TSPAN17-208ENST00000514705 SDF4Q9BRK5 362 aa16.47■□□□□ 0.23
TSPAN17-208ENST00000514705 CCDC8Q9H0W5 538 aaPredicted RBP16.47■□□□□ 0.23
TSPAN17-208ENST00000514705 BOLA2Q9H3K6 86 aa16.47■□□□□ 0.23
TSPAN17-208ENST00000514705 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
TSPAN17-208ENST00000514705 PTGS1P23219 599 aa16.47■□□□□ 0.23
TSPAN17-208ENST00000514705 GNL2Q13823 731 aaKnown RBP16.47■□□□□ 0.23
TSPAN17-208ENST00000514705 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
TSPAN17-208ENST00000514705 TNNT1P13805 278 aa16.46■□□□□ 0.23
TSPAN17-208ENST00000514705 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.23
TSPAN17-208ENST00000514705 PI4KAP2A4QPH2 592 aa16.46■□□□□ 0.23
TSPAN17-208ENST00000514705 PIP4K2BP78356 416 aa16.46■□□□□ 0.23
TSPAN17-208ENST00000514705 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
TSPAN17-208ENST00000514705 PI4KAP1Q8N8J0 262 aa16.46■□□□□ 0.23
TSPAN17-208ENST00000514705 PTCH1Q13635 1447 aa16.46■□□□□ 0.23
TSPAN17-208ENST00000514705 TTC21BQ7Z4L5 1316 aa16.46■□□□□ 0.22
TSPAN17-208ENST00000514705 C19orf44Q9H6X5 657 aa16.46■□□□□ 0.22
TSPAN17-208ENST00000514705 CEP152O94986 1710 aa16.45■□□□□ 0.22
TSPAN17-208ENST00000514705 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
TSPAN17-208ENST00000514705 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
TSPAN17-208ENST00000514705 PHAXQ9H814 394 aaKnown RBP16.45■□□□□ 0.22
TSPAN17-208ENST00000514705 AK9Q5TCS8 1911 aa16.45■□□□□ 0.22
TSPAN17-208ENST00000514705 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
TSPAN17-208ENST00000514705 DACT1Q9NYF0 836 aa16.45■□□□□ 0.22
TSPAN17-208ENST00000514705 KRT28Q7Z3Y7 464 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 SH2B1Q9NRF2 756 aaPredicted RBP16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 SNX14Q9Y5W7 946 aa16.44■□□□□ 0.22
TSPAN17-208ENST00000514705 LMTK2Q8IWU2 1503 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms