RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 CHMP5Q9NZZ3 219 aa5.74□□□□□ -1.49
SEC24D-214ENST00000514561 KCNA6P17658 529 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 PLEKHO1Q53GL0 409 aaPredicted RBP5.73□□□□□ -1.49
SEC24D-214ENST00000514561 DNTTIP2Q5QJE6 756 aaKnown RBP5.73□□□□□ -1.49
SEC24D-214ENST00000514561 IFT57Q9NWB7 429 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 PIK3C2GO75747 1445 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 C3P01024 1663 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.73□□□□□ -1.49
SEC24D-214ENST00000514561 GNAT3A8MTJ3 354 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 TMCO4Q5TGY1 634 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 SMC5Q8IY18 1101 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 ZHX1Q9UKY1 873 aaPredicted RBP5.73□□□□□ -1.49
SEC24D-214ENST00000514561 NEXMIFQ5QGS0 1516 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 XRN1Q8IZH2 1706 aaKnown RBP5.73□□□□□ -1.49
SEC24D-214ENST00000514561 BTBD11A6QL63 1104 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 DDX11L8A8MPP1 907 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 SRGAP3O43295 1099 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 GNAI3P08754 354 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 SLC20A2Q08357 652 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 G3BP1Q13283 466 aaKnown RBP eCLIP5.73□□□□□ -1.491e-6■■■□□ 15.2
SEC24D-214ENST00000514561 RAB3GAP1Q15042 981 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 GCC1Q96CN9 775 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 ZNF830Q96NB3 372 aaPredicted RBP5.73□□□□□ -1.49
SEC24D-214ENST00000514561 NEUROD6Q96NK8 337 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 SUGT1Q9Y2Z0 365 aa5.73□□□□□ -1.49
SEC24D-214ENST00000514561 DDX58O95786 925 aaKnown RBP5.72□□□□□ -1.49
SEC24D-214ENST00000514561 NEK4P51957 841 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 CHRNA2Q15822 529 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 CCDC85AQ96PX6 553 aaPredicted RBP5.72□□□□□ -1.49
SEC24D-214ENST00000514561 PRDM11Q9NQV5 511 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 NSD2O96028 1365 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 PTCD1O75127 700 aaKnown RBP5.72□□□□□ -1.49
SEC24D-214ENST00000514561 ZNF445P59923 1031 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 ZRSR1Q15695 479 aaKnown RBP5.72□□□□□ -1.49
SEC24D-214ENST00000514561 TOM1L2Q6ZVM7 507 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 SNX21Q969T3 373 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 LRRC59Q96AG4 307 aaKnown RBP5.72□□□□□ -1.49
SEC24D-214ENST00000514561 SRCIN1Q9C0H9 1055 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 AK9Q5TCS8 1911 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 LTKP29376 864 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 FOSBP53539 338 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 NUTM1Q86Y26 1132 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 MEIS3Q99687 375 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 RPS6KL1Q9Y6S9 549 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 CPS1P31327 1500 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 AKAP12Q02952 1782 aa5.72□□□□□ -1.49
SEC24D-214ENST00000514561 ARHGAP23Q9P227 1491 aa5.71□□□□□ -1.49
SEC24D-214ENST00000514561 TOMM22Q9NS69 142 aa5.71□□□□□ -1.49
SEC24D-214ENST00000514561 TRIM35Q9UPQ4 493 aa5.71□□□□□ -1.49
SEC24D-214ENST00000514561 HDAC5Q9UQL6 1122 aa5.71□□□□□ -1.49
SEC24D-214ENST00000514561 ADGRB1O14514 1584 aa5.71□□□□□ -1.49
SEC24D-214ENST00000514561 KAT6BQ8WYB5 2073 aa5.71□□□□□ -1.49
SEC24D-214ENST00000514561 ABCC11Q96J66 1382 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 LETM1O95202 739 aaPredicted RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 TATP17735 454 aaPredicted RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 PIP4K2AP48426 406 aaPredicted RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 ALDH1L2Q3SY69 923 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 MCTP1Q6DN14 999 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 CLASRPQ8N2M8 674 aaKnown RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 CABLES1Q8TDN4 633 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 KIF2CQ99661 725 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 SBNO2Q9Y2G9 1366 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 A6NJR5 290 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 CCT4P50991 539 aaKnown RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 TAF7Q15545 349 aaPredicted RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 MTHFSDQ2M296 383 aaKnown RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 TEX2Q8IWB9 1127 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 JARID2Q92833 1246 aaPredicted RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 RBM42Q9BTD8 480 aaKnown RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 LRRCC1Q9C099 1032 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 CIZ1Q9ULV3 898 aaPredicted RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 U3KPZ7 1027 aaPredicted RBP5.71□□□□□ -1.5
SEC24D-214ENST00000514561 MAP3K19Q56UN5 1328 aa5.71□□□□□ -1.5
SEC24D-214ENST00000514561 NALCNQ8IZF0 1738 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 UQCRHLA0A096LP55 91 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 UQCRHP07919 91 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 MCM5P33992 734 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 HSPA2P54652 639 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 FLIIQ13045 1269 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 C16orf71Q8IYS4 520 aaPredicted RBP5.7□□□□□ -1.5
SEC24D-214ENST00000514561 TNPO1Q92973 898 aaKnown RBP5.7□□□□□ -1.5
SEC24D-214ENST00000514561 LRRFIP2Q9Y608 721 aaKnown RBP5.7□□□□□ -1.5
SEC24D-214ENST00000514561 MYO5BQ9ULV0 1848 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 VAMP4O75379 141 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 ATP2B3Q16720 1220 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 GIMAP6Q6P9H5 292 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 DNAJC2Q99543 621 aaKnown RBP5.7□□□□□ -1.5
SEC24D-214ENST00000514561 UPF3BQ9BZI7 483 aaKnown RBP5.7□□□□□ -1.5
SEC24D-214ENST00000514561 NPC1L1Q9UHC9 1359 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 MED14O60244 1454 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 NRKQ7Z2Y5 1582 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 VPS37CA5D8V6 355 aaPredicted RBP5.7□□□□□ -1.5
SEC24D-214ENST00000514561 EYA1Q99502 592 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 LMTK3Q96Q04 1460 aa5.7□□□□□ -1.5
SEC24D-214ENST00000514561 MST1RQ04912 1400 aa5.69□□□□□ -1.5
SEC24D-214ENST00000514561 GPR37O15354 613 aa5.69□□□□□ -1.5
SEC24D-214ENST00000514561 CABP4P57796 275 aa5.69□□□□□ -1.5
SEC24D-214ENST00000514561 SLC39A6Q13433 755 aa5.69□□□□□ -1.5
SEC24D-214ENST00000514561 SASS6Q6UVJ0 657 aa5.69□□□□□ -1.5
SEC24D-214ENST00000514561 MYRIPQ8NFW9 859 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms