RNA–Protein interactions for RNA: ENST00000513719.1

SNCAIP-218, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,303 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-218ENST00000513719 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.21
SNCAIP-218ENST00000513719 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
SNCAIP-218ENST00000513719 PCDH11XQ9BZA7 1347 aa16.38■□□□□ 0.21
SNCAIP-218ENST00000513719 PCDH11YQ9BZA8 1340 aa16.38■□□□□ 0.21
SNCAIP-218ENST00000513719 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
SNCAIP-218ENST00000513719 BCL11AQ9H165 835 aa16.38■□□□□ 0.21
SNCAIP-218ENST00000513719 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
SNCAIP-218ENST00000513719 UBTFL1P0CB47 393 aaPredicted RBP16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 GSPT1P15170 499 aaKnown RBP16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 LRP10Q7Z4F1 713 aa16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 AHDC1Q5TGY3 1603 aaPredicted RBP16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 SHANK3Q9BYB0 1731 aa16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 HMMRO75330 724 aa16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 DDX54Q8TDD1 881 aaKnown RBP16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 GLI3P10071 1580 aa16.37■□□□□ 0.21
SNCAIP-218ENST00000513719 TBC1D32Q96NH3 1257 aa16.36■□□□□ 0.21
SNCAIP-218ENST00000513719 PIP4K2AP48426 406 aaPredicted RBP16.36■□□□□ 0.21
SNCAIP-218ENST00000513719 AIMP1Q12904 312 aaKnown RBP16.36■□□□□ 0.21
SNCAIP-218ENST00000513719 DDRGK1Q96HY6 314 aa16.36■□□□□ 0.21
SNCAIP-218ENST00000513719 SNRPA1P09661 255 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-218ENST00000513719 MYL6BP14649 208 aa16.35■□□□□ 0.21
SNCAIP-218ENST00000513719 TTC5Q8N0Z6 440 aa16.35■□□□□ 0.21
SNCAIP-218ENST00000513719 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-218ENST00000513719 FMNL2Q96PY5 1086 aa16.35■□□□□ 0.21
SNCAIP-218ENST00000513719 ERVV-2B6SEH9 535 aa16.34■□□□□ 0.21
SNCAIP-218ENST00000513719 MFAP1P55081 439 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-218ENST00000513719 SSH3Q8TE77 659 aa16.34■□□□□ 0.21
SNCAIP-218ENST00000513719 COL16A1Q07092 1604 aaPredicted RBP16.33■□□□□ 0.21
SNCAIP-218ENST00000513719 PPP1R42Q7Z4L9 355 aa16.33■□□□□ 0.2
SNCAIP-218ENST00000513719 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
SNCAIP-218ENST00000513719 POLA2Q14181 598 aa16.33■□□□□ 0.2
SNCAIP-218ENST00000513719 TTC22Q5TAA0 569 aa16.33■□□□□ 0.2
SNCAIP-218ENST00000513719 COPS6Q7L5N1 327 aa16.33■□□□□ 0.2
SNCAIP-218ENST00000513719 COL22A1Q8NFW1 1626 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-218ENST00000513719 IGKV5-2P06315 115 aa16.32■□□□□ 0.2
SNCAIP-218ENST00000513719 IBTKQ9P2D0 1353 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-218ENST00000513719 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
SNCAIP-218ENST00000513719 TBC1D9Q6ZT07 1266 aa16.31■□□□□ 0.2
SNCAIP-218ENST00000513719 SALL3Q9BXA9 1300 aa16.31■□□□□ 0.2
SNCAIP-218ENST00000513719 COL14A1Q05707 1796 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 DISP2A7MBM2 1401 aa16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 KAZALD1Q96I82 304 aa16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 C22orf23Q9BZE7 217 aa16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 UPF2Q9HAU5 1272 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-218ENST00000513719 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
SNCAIP-218ENST00000513719 DDX58O95786 925 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-218ENST00000513719 LRRCC1Q9C099 1032 aa16.29■□□□□ 0.2
SNCAIP-218ENST00000513719 SRGAP3O43295 1099 aa16.29■□□□□ 0.2
SNCAIP-218ENST00000513719 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
SNCAIP-218ENST00000513719 PDE1AP54750 535 aa16.28■□□□□ 0.2
SNCAIP-218ENST00000513719 C9orf78Q9NZ63 289 aaPredicted RBP16.28■□□□□ 0.2
SNCAIP-218ENST00000513719 UTYO14607 1347 aa16.28■□□□□ 0.2
SNCAIP-218ENST00000513719 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
SNCAIP-218ENST00000513719 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
SNCAIP-218ENST00000513719 SDSP20132 328 aa16.28■□□□□ 0.2
SNCAIP-218ENST00000513719 TSHZ3Q63HK5 1081 aa16.28■□□□□ 0.2
SNCAIP-218ENST00000513719 OSBPL3Q9H4L5 887 aa16.28■□□□□ 0.2
SNCAIP-218ENST00000513719 PAPPAQ13219 1627 aa16.27■□□□□ 0.2
SNCAIP-218ENST00000513719 GRM8O00222 908 aa16.27■□□□□ 0.2
SNCAIP-218ENST00000513719 ADAMTS2O95450 1211 aa16.27■□□□□ 0.2
SNCAIP-218ENST00000513719 ANKRD13DQ6ZTN6 518 aa16.27■□□□□ 0.2
SNCAIP-218ENST00000513719 SUCLG2Q96I99 432 aa16.27■□□□□ 0.2
SNCAIP-218ENST00000513719 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.2
SNCAIP-218ENST00000513719 TNS2Q63HR2 1409 aa16.27■□□□□ 0.2
SNCAIP-218ENST00000513719 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.19
SNCAIP-218ENST00000513719 SURF6O75683 361 aaKnown RBP16.27■□□□□ 0.19
SNCAIP-218ENST00000513719 MTX1Q13505 466 aa16.27■□□□□ 0.19
SNCAIP-218ENST00000513719 PIP4K2BP78356 416 aa16.26■□□□□ 0.19
SNCAIP-218ENST00000513719 PIGBQ92521 554 aa16.26■□□□□ 0.19
SNCAIP-218ENST00000513719 MYD88Q99836 296 aa16.26■□□□□ 0.19
SNCAIP-218ENST00000513719 CDC45O75419 566 aa16.25■□□□□ 0.19
SNCAIP-218ENST00000513719 A1BGP04217 495 aa16.25■□□□□ 0.19
SNCAIP-218ENST00000513719 IL1RAPL2Q9NP60 686 aa16.25■□□□□ 0.19
SNCAIP-218ENST00000513719 PHLPP1O60346 1717 aa16.25■□□□□ 0.19
SNCAIP-218ENST00000513719 ASAP1Q9ULH1 1129 aa16.25■□□□□ 0.19
SNCAIP-218ENST00000513719 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
SNCAIP-218ENST00000513719 GCKRQ14397 625 aa16.24■□□□□ 0.19
SNCAIP-218ENST00000513719 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-218ENST00000513719 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
SNCAIP-218ENST00000513719 TTLL7Q6ZT98 887 aa16.23■□□□□ 0.19
SNCAIP-218ENST00000513719 RHPN1Q8TCX5 695 aa16.23■□□□□ 0.19
SNCAIP-218ENST00000513719 JARID2Q92833 1246 aaPredicted RBP16.23■□□□□ 0.19
SNCAIP-218ENST00000513719 BICC1Q9H694 974 aaKnown RBP16.23■□□□□ 0.19
SNCAIP-218ENST00000513719 RAB11FIP3O75154 756 aa16.23■□□□□ 0.19
SNCAIP-218ENST00000513719 MX1P20591 662 aa16.23■□□□□ 0.19
SNCAIP-218ENST00000513719 EPHA10Q5JZY3 1008 aa16.23■□□□□ 0.19
SNCAIP-218ENST00000513719 ATG3Q9NT62 314 aa16.23■□□□□ 0.19
SNCAIP-218ENST00000513719 PA2G4Q9UQ80 394 aaKnown RBP16.23■□□□□ 0.19
SNCAIP-218ENST00000513719 KIF2CQ99661 725 aa16.22■□□□□ 0.19
SNCAIP-218ENST00000513719 STAP2Q9UGK3 403 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms