RNA–Protein interactions for RNA: ENST00000510658.5

SNCAIP-215, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-215ENST00000510658 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
SNCAIP-215ENST00000510658 IL2RBP14784 551 aa17.26■□□□□ 0.35
SNCAIP-215ENST00000510658 GSPT1P15170 499 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-215ENST00000510658 AIMP1Q12904 312 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-215ENST00000510658 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
SNCAIP-215ENST00000510658 MRC1P22897 1456 aa17.26■□□□□ 0.35
SNCAIP-215ENST00000510658 DDX21Q9NR30 783 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNCAIP-215ENST00000510658 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
SNCAIP-215ENST00000510658 PCDH11XQ9BZA7 1347 aa17.25■□□□□ 0.35
SNCAIP-215ENST00000510658 PCDH11YQ9BZA8 1340 aa17.25■□□□□ 0.35
SNCAIP-215ENST00000510658 USP16Q9Y5T5 823 aa17.25■□□□□ 0.35
SNCAIP-215ENST00000510658 C5P01031 1676 aa17.24■□□□□ 0.35
SNCAIP-215ENST00000510658 MYL6BP14649 208 aa17.24■□□□□ 0.35
SNCAIP-215ENST00000510658 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
SNCAIP-215ENST00000510658 DDX54Q8TDD1 881 aaKnown RBP17.24■□□□□ 0.35
SNCAIP-215ENST00000510658 BTG4Q9NY30 223 aa17.24■□□□□ 0.35
SNCAIP-215ENST00000510658 PIP4K2AP48426 406 aaPredicted RBP17.24■□□□□ 0.35
SNCAIP-215ENST00000510658 PARP4Q9UKK3 1724 aaKnown RBP17.23■□□□□ 0.35
SNCAIP-215ENST00000510658 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
SNCAIP-215ENST00000510658 CWF19L2Q2TBE0 894 aaKnown RBP17.23■□□□□ 0.35
SNCAIP-215ENST00000510658 SNRPA1P09661 255 aaKnown RBP17.22■□□□□ 0.35
SNCAIP-215ENST00000510658 FMNL2Q96PY5 1086 aa17.22■□□□□ 0.35
SNCAIP-215ENST00000510658 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
SNCAIP-215ENST00000510658 DAXXQ9UER7 740 aaPredicted RBP17.22■□□□□ 0.35
SNCAIP-215ENST00000510658 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
SNCAIP-215ENST00000510658 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
SNCAIP-215ENST00000510658 TBC1D9Q6ZT07 1266 aa17.21■□□□□ 0.35
SNCAIP-215ENST00000510658 COPS6Q7L5N1 327 aa17.2■□□□□ 0.34
SNCAIP-215ENST00000510658 SSH3Q8TE77 659 aa17.2■□□□□ 0.34
SNCAIP-215ENST00000510658 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
SNCAIP-215ENST00000510658 LRRCC1Q9C099 1032 aa17.2■□□□□ 0.34
SNCAIP-215ENST00000510658 IBTKQ9P2D0 1353 aaPredicted RBP17.19■□□□□ 0.34
SNCAIP-215ENST00000510658 LTBP4Q8N2S1 1624 aa17.19■□□□□ 0.34
SNCAIP-215ENST00000510658 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
SNCAIP-215ENST00000510658 SRGAP3O43295 1099 aa17.18■□□□□ 0.34
SNCAIP-215ENST00000510658 DDX58O95786 925 aaKnown RBP17.18■□□□□ 0.34
SNCAIP-215ENST00000510658 NBR1Q14596 966 aa17.18■□□□□ 0.34
SNCAIP-215ENST00000510658 LRP10Q7Z4F1 713 aa17.18■□□□□ 0.34
SNCAIP-215ENST00000510658 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
SNCAIP-215ENST00000510658 C9orf78Q9NZ63 289 aaPredicted RBP17.18■□□□□ 0.34
SNCAIP-215ENST00000510658 ERVV-2B6SEH9 535 aa17.18■□□□□ 0.34
SNCAIP-215ENST00000510658 ALDH1L1O75891 902 aa17.18■□□□□ 0.34
SNCAIP-215ENST00000510658 TSHZ3Q63HK5 1081 aa17.18■□□□□ 0.34
SNCAIP-215ENST00000510658 POLA2Q14181 598 aa17.17■□□□□ 0.34
SNCAIP-215ENST00000510658 SHANK3Q9BYB0 1731 aa17.17■□□□□ 0.34
SNCAIP-215ENST00000510658 LINS1Q8NG48 757 aa17.17■□□□□ 0.34
SNCAIP-215ENST00000510658 CDC45O75419 566 aa17.16■□□□□ 0.34
SNCAIP-215ENST00000510658 SURF6O75683 361 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-215ENST00000510658 IGKV5-2P06315 115 aa17.16■□□□□ 0.34
SNCAIP-215ENST00000510658 SDSP20132 328 aa17.16■□□□□ 0.34
SNCAIP-215ENST00000510658 PDE1AP54750 535 aa17.16■□□□□ 0.34
SNCAIP-215ENST00000510658 GLI3P10071 1580 aa17.16■□□□□ 0.34
SNCAIP-215ENST00000510658 AHDC1Q5TGY3 1603 aaPredicted RBP17.16■□□□□ 0.34
SNCAIP-215ENST00000510658 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-215ENST00000510658 IL1RAPL2Q9NP60 686 aa17.15■□□□□ 0.34
SNCAIP-215ENST00000510658 SALL3Q9BXA9 1300 aa17.15■□□□□ 0.34
SNCAIP-215ENST00000510658 GRM8O00222 908 aa17.14■□□□□ 0.33
SNCAIP-215ENST00000510658 MYD88Q99836 296 aa17.14■□□□□ 0.33
SNCAIP-215ENST00000510658 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
SNCAIP-215ENST00000510658 ANKRD13DQ6ZTN6 518 aa17.14■□□□□ 0.33
SNCAIP-215ENST00000510658 SUCLG2Q96I99 432 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 ADAMTS2O95450 1211 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 MX1P20591 662 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 RBM25P49756 843 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 BECN1Q14457 450 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 TBC1D2Q9BYX2 928 aa17.13■□□□□ 0.33
SNCAIP-215ENST00000510658 COL16A1Q07092 1604 aaPredicted RBP17.12■□□□□ 0.33
SNCAIP-215ENST00000510658 COL14A1Q05707 1796 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-215ENST00000510658 NEXNQ0ZGT2 675 aa17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 MTX1Q13505 466 aa17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 RHPN1Q8TCX5 695 aa17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 UTYO14607 1347 aa17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 A1BGP04217 495 aa17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 TOGARAM1Q9Y4F4 1720 aa17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 COL22A1Q8NFW1 1626 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-215ENST00000510658 RAB11FIP3O75154 756 aa17.1■□□□□ 0.33
SNCAIP-215ENST00000510658 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
SNCAIP-215ENST00000510658 TMOD3Q9NYL9 352 aa17.1■□□□□ 0.33
SNCAIP-215ENST00000510658 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-215ENST00000510658 GCKRQ14397 625 aa17.1■□□□□ 0.33
SNCAIP-215ENST00000510658 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-215ENST00000510658 DISP2A7MBM2 1401 aa17.1■□□□□ 0.33
SNCAIP-215ENST00000510658 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
SNCAIP-215ENST00000510658 PIGBQ92521 554 aa17.09■□□□□ 0.33
SNCAIP-215ENST00000510658 ATP5J2-PTCD1G3V325 749 aa17.09■□□□□ 0.33
SNCAIP-215ENST00000510658 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
SNCAIP-215ENST00000510658 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
SNCAIP-215ENST00000510658 LAMB4A4D0S4 1761 aa17.09■□□□□ 0.33
SNCAIP-215ENST00000510658 TNS2Q63HR2 1409 aa17.08■□□□□ 0.32
SNCAIP-215ENST00000510658 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms