RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 USP47Q96K76 1375 aa7.89□□□□□ -1.15
AFP-204ENST00000508838 IGSF1Q8N6C5 1336 aa7.89□□□□□ -1.15
AFP-204ENST00000508838 HOXB1P14653 301 aaPredicted RBP7.89□□□□□ -1.15
AFP-204ENST00000508838 RRS1Q15050 365 aaKnown RBP7.89□□□□□ -1.15
AFP-204ENST00000508838 ERICH6Q7L0X2 663 aa7.89□□□□□ -1.15
AFP-204ENST00000508838 TFCP2L1Q9NZI6 479 aa7.89□□□□□ -1.15
AFP-204ENST00000508838 TIMELESSQ9UNS1 1208 aa7.89□□□□□ -1.15
AFP-204ENST00000508838 FLT4P35916 1363 aa7.88□□□□□ -1.15
AFP-204ENST00000508838 POLD1P28340 1107 aa7.88□□□□□ -1.15
AFP-204ENST00000508838 VARS2Q5ST30 1063 aaKnown RBP7.88□□□□□ -1.15
AFP-204ENST00000508838 LINC00116Q8NCU8 138 aa7.88□□□□□ -1.15
AFP-204ENST00000508838 WWC3Q9ULE0 1092 aa7.88□□□□□ -1.15
AFP-204ENST00000508838 MRC1P22897 1456 aa7.87□□□□□ -1.15
AFP-204ENST00000508838 HSPA6P17066 643 aa7.87□□□□□ -1.15
AFP-204ENST00000508838 ITPK1Q13572 414 aa7.87□□□□□ -1.15
AFP-204ENST00000508838 ZCRB1Q8TBF4 217 aaKnown RBP7.87□□□□□ -1.15
AFP-204ENST00000508838 SYTL4Q96C24 671 aaPredicted RBP7.87□□□□□ -1.15
AFP-204ENST00000508838 SLC4A9Q96Q91 983 aa7.87□□□□□ -1.15
AFP-204ENST00000508838 KCPQ6ZWJ8 1503 aa7.87□□□□□ -1.15
AFP-204ENST00000508838 PCDH11XQ9BZA7 1347 aa7.86□□□□□ -1.15
AFP-204ENST00000508838 PCDH11YQ9BZA8 1340 aa7.86□□□□□ -1.15
AFP-204ENST00000508838 HSP90AB2PQ58FF8 381 aa7.86□□□□□ -1.15
AFP-204ENST00000508838 ZNF710Q8N1W2 664 aa7.86□□□□□ -1.15
AFP-204ENST00000508838 CD2APQ9Y5K6 639 aa7.86□□□□□ -1.15
AFP-204ENST00000508838 KIF24Q5T7B8 1368 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 TONSLQ96HA7 1378 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 ADAMTSL1Q8N6G6 1762 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 FYB1O15117 783 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 ANKRD13DQ6ZTN6 518 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 ZNF687Q8N1G0 1237 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 DNAJC5GQ8N7S2 189 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 TMC1Q8TDI8 760 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 ZNF526Q8TF50 670 aaPredicted RBP7.85□□□□□ -1.15
AFP-204ENST00000508838 PUS7Q96PZ0 661 aaKnown RBP7.85□□□□□ -1.15
AFP-204ENST00000508838 CARD11Q9BXL7 1154 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 EMILIN1Q9Y6C2 1016 aa7.85□□□□□ -1.15
AFP-204ENST00000508838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
AFP-204ENST00000508838 TULP1O00294 542 aaPredicted RBP7.84□□□□□ -1.15
AFP-204ENST00000508838 HDGFL2Q7Z4V5 671 aaPredicted RBP7.84□□□□□ -1.15
AFP-204ENST00000508838 PIGBQ92521 554 aa7.84□□□□□ -1.15
AFP-204ENST00000508838 GGNBP2Q9H3C7 697 aa7.84□□□□□ -1.15
AFP-204ENST00000508838 HCSTQ9UBK5 93 aa7.84□□□□□ -1.15
AFP-204ENST00000508838 THSD7BQ9C0I4 1608 aa7.84□□□□□ -1.15
AFP-204ENST00000508838 CGNL1Q0VF96 1302 aa7.83□□□□□ -1.16
AFP-204ENST00000508838 ST20-MTHFSA0A0A6YYL1 179 aa7.83□□□□□ -1.16
AFP-204ENST00000508838 GRIN3BO60391 1043 aa7.83□□□□□ -1.16
AFP-204ENST00000508838 NEUROD1Q13562 356 aa7.83□□□□□ -1.16
AFP-204ENST00000508838 NKX1-1Q15270 411 aaPredicted RBP7.83□□□□□ -1.16
AFP-204ENST00000508838 IFNL1Q8IU54 200 aa7.83□□□□□ -1.16
AFP-204ENST00000508838 L3MBTL3Q96JM7 780 aaPredicted RBP7.83□□□□□ -1.16
AFP-204ENST00000508838 CARD14Q9BXL6 1004 aa7.83□□□□□ -1.16
AFP-204ENST00000508838 GPBP1L1Q9HC44 474 aaPredicted RBP7.83□□□□□ -1.16
AFP-204ENST00000508838 TERF2IPQ9NYB0 399 aa7.83□□□□□ -1.16
AFP-204ENST00000508838 FBXO3Q9UK99 471 aa7.83□□□□□ -1.16
AFP-204ENST00000508838 PHF14O94880 888 aa7.82□□□□□ -1.16
AFP-204ENST00000508838 HTRA3P83110 453 aa7.82□□□□□ -1.16
AFP-204ENST00000508838 COG3Q96JB2 828 aa7.82□□□□□ -1.16
AFP-204ENST00000508838 NMRK2Q9NPI5 230 aa7.82□□□□□ -1.16
AFP-204ENST00000508838 PLEKHG2Q9H7P9 1386 aa7.82□□□□□ -1.16
AFP-204ENST00000508838 SLX4Q8IY92 1834 aa7.81□□□□□ -1.16
AFP-204ENST00000508838 LOC102724428A0A0B4J2F2 783 aa7.81□□□□□ -1.16
AFP-204ENST00000508838 HOXB3P14651 431 aaPredicted RBP7.81□□□□□ -1.16
AFP-204ENST00000508838 KCNA3P22001 575 aa7.81□□□□□ -1.16
AFP-204ENST00000508838 SSFA2P28290 1259 aa7.81□□□□□ -1.16
AFP-204ENST00000508838 PRELPP51888 382 aa7.81□□□□□ -1.16
AFP-204ENST00000508838 SIK1P57059 783 aa7.81□□□□□ -1.16
AFP-204ENST00000508838 MPRIPQ6WCQ1 1025 aa7.81□□□□□ -1.16
AFP-204ENST00000508838 ASAP1Q9ULH1 1129 aa7.81□□□□□ -1.16
AFP-204ENST00000508838 CARMIL3Q8ND23 1372 aa7.81□□□□□ -1.16
AFP-204ENST00000508838 AMPHP49418 695 aa7.8□□□□□ -1.16
AFP-204ENST00000508838 RASEFQ8IZ41 740 aa7.8□□□□□ -1.16
AFP-204ENST00000508838 TNRC18O15417 2968 aaPredicted RBP7.79□□□□□ -1.16
AFP-204ENST00000508838 RGS20O76081 388 aa7.79□□□□□ -1.16
AFP-204ENST00000508838 MMP10P09238 476 aa7.79□□□□□ -1.16
AFP-204ENST00000508838 TATP17735 454 aaPredicted RBP7.79□□□□□ -1.16
AFP-204ENST00000508838 DDR1Q08345 913 aa7.79□□□□□ -1.16
AFP-204ENST00000508838 AK7Q96M32 723 aa7.79□□□□□ -1.16
AFP-204ENST00000508838 ATG3Q9NT62 314 aa7.79□□□□□ -1.16
AFP-204ENST00000508838 LAMB4A4D0S4 1761 aa7.79□□□□□ -1.16
AFP-204ENST00000508838 LTBP1Q14766 1721 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 GNPATO15228 680 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 GYS1P13807 737 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 PHKG2P15735 406 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 HOMEZQ8IX15 550 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 JMYQ8N9B5 988 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 RAPGEF4Q8WZA2 1011 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 EYA1Q99502 592 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 COL3A1P02461 1466 aaPredicted RBP7.78□□□□□ -1.16
AFP-204ENST00000508838 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 CNTNAP4Q9C0A0 1308 aa7.78□□□□□ -1.16
AFP-204ENST00000508838 DPEP1P16444 411 aa7.77□□□□□ -1.17
AFP-204ENST00000508838 COL13A1Q5TAT6 717 aaPredicted RBP7.77□□□□□ -1.17
AFP-204ENST00000508838 FLAD1Q8NFF5 587 aa7.77□□□□□ -1.17
AFP-204ENST00000508838 SCN4AP35499 1836 aa7.76□□□□□ -1.17
AFP-204ENST00000508838 A0A0G2JLW4 131 aa7.76□□□□□ -1.17
AFP-204ENST00000508838 EIF4A2Q14240 407 aaKnown RBP7.76□□□□□ -1.17
AFP-204ENST00000508838 DCAF5Q96JK2 942 aa7.76□□□□□ -1.17
AFP-204ENST00000508838 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.76□□□□□ -1.17
AFP-204ENST00000508838 DLG5Q8TDM6 1919 aa7.76□□□□□ -1.17
AFP-204ENST00000508838 USP42Q9H9J4 1324 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms