RNA–Protein interactions for RNA: ENST00000503684.5

CASP6-203, Transcript of caspase 6, humanhuman

TSL 3

Gene CASP6, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-203ENST00000503684 NPHP3Q7Z494 1330 aa8.55□□□□□ -1.04
CASP6-203ENST00000503684 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
CASP6-203ENST00000503684 NRG2O14511 850 aaPredicted RBP8.55□□□□□ -1.04
CASP6-203ENST00000503684 PLA2G2CQ5R387 149 aa8.55□□□□□ -1.04
CASP6-203ENST00000503684 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
CASP6-203ENST00000503684 LIAT1Q6ZQX7 453 aa8.55□□□□□ -1.04
CASP6-203ENST00000503684 KRT28Q7Z3Y7 464 aa8.55□□□□□ -1.04
CASP6-203ENST00000503684 HDGFL2Q7Z4V5 671 aaPredicted RBP8.55□□□□□ -1.04
CASP6-203ENST00000503684 TERF2IPQ9NYB0 399 aa8.55□□□□□ -1.04
CASP6-203ENST00000503684 TOPAZ1Q8N9V7 1692 aa8.54□□□□□ -1.04
CASP6-203ENST00000503684 A0A1W2PP64 1363 aa8.54□□□□□ -1.04
CASP6-203ENST00000503684 KTN1Q86UP2 1357 aaKnown RBP8.54□□□□□ -1.04
CASP6-203ENST00000503684 USP46P62068 366 aa8.54□□□□□ -1.04
CASP6-203ENST00000503684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
CASP6-203ENST00000503684 PUS7Q96PZ0 661 aaKnown RBP8.54□□□□□ -1.04
CASP6-203ENST00000503684 PRDM9Q9NQV7 894 aa8.54□□□□□ -1.04
CASP6-203ENST00000503684 PDZRN3Q9UPQ7 1066 aa8.54□□□□□ -1.04
CASP6-203ENST00000503684 KIF1AQ12756 1690 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 PXDNQ92626 1479 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 POLR3AO14802 1390 aaPredicted RBP8.53□□□□□ -1.04
CASP6-203ENST00000503684 NINLQ9Y2I6 1382 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 HOXA2O43364 376 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 AMHR2Q16671 573 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 Q3C1V9 767 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 MSS51Q4VC12 460 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 NUTM2GQ5VZR2 741 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 HLA-CQ95604 372 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 ITSN1Q15811 1721 aa8.53□□□□□ -1.04
CASP6-203ENST00000503684 RGPD8O14715 1765 aaPredicted RBP8.53□□□□□ -1.04
CASP6-203ENST00000503684 SOS2Q07890 1332 aaPredicted RBP8.53□□□□□ -1.04
CASP6-203ENST00000503684 CD163L1Q9NR16 1453 aa8.52□□□□□ -1.05
CASP6-203ENST00000503684 ANKRD36BQ8N2N9 1353 aa8.52□□□□□ -1.05
CASP6-203ENST00000503684 AHDC1Q5TGY3 1603 aaPredicted RBP8.52□□□□□ -1.05
CASP6-203ENST00000503684 CNGB1Q14028 1251 aaPredicted RBP8.52□□□□□ -1.05
CASP6-203ENST00000503684 TTLL12Q14166 644 aaPredicted RBP8.52□□□□□ -1.05
CASP6-203ENST00000503684 ZNF598Q86UK7 904 aaKnown RBP8.52□□□□□ -1.05
CASP6-203ENST00000503684 PANK3Q9H999 370 aa8.52□□□□□ -1.05
CASP6-203ENST00000503684 USP6P35125 1406 aa8.52□□□□□ -1.05
CASP6-203ENST00000503684 TNS3Q68CZ2 1445 aa8.52□□□□□ -1.05
CASP6-203ENST00000503684 NSD3Q9BZ95 1437 aa8.52□□□□□ -1.05
CASP6-203ENST00000503684 TRIM67Q6ZTA4 783 aa8.51□□□□□ -1.05
CASP6-203ENST00000503684 FCF1Q9Y324 198 aaKnown RBP8.51□□□□□ -1.05
CASP6-203ENST00000503684 CPSF1Q10570 1443 aaKnown RBP8.51□□□□□ -1.05
CASP6-203ENST00000503684 SPATA31A3Q5VYP0 1347 aa8.51□□□□□ -1.05
CASP6-203ENST00000503684 TTC21BQ7Z4L5 1316 aa8.51□□□□□ -1.05
CASP6-203ENST00000503684 NHSL1Q5SYE7 1610 aa8.51□□□□□ -1.05
CASP6-203ENST00000503684 MYOM1P52179 1685 aa8.5□□□□□ -1.05
CASP6-203ENST00000503684 PHLPP1O60346 1717 aa8.5□□□□□ -1.05
CASP6-203ENST00000503684 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
CASP6-203ENST00000503684 DDX10Q13206 875 aaKnown RBP8.5□□□□□ -1.05
CASP6-203ENST00000503684 ZNF697Q5TEC3 545 aa8.5□□□□□ -1.05
CASP6-203ENST00000503684 NME9Q86XW9 330 aa8.5□□□□□ -1.05
CASP6-203ENST00000503684 ABTB2Q8N961 1025 aa8.5□□□□□ -1.05
CASP6-203ENST00000503684 LRRC59Q96AG4 307 aaKnown RBP8.5□□□□□ -1.05
CASP6-203ENST00000503684 COL16A1Q07092 1604 aaPredicted RBP8.5□□□□□ -1.05
CASP6-203ENST00000503684 SBNO1A3KN83 1393 aa8.49□□□□□ -1.05
CASP6-203ENST00000503684 PNPLA6Q8IY17 1366 aa8.49□□□□□ -1.05
CASP6-203ENST00000503684 EDC4Q6P2E9 1401 aaKnown RBP8.49□□□□□ -1.05
CASP6-203ENST00000503684 NUTM2BA6NNL0 878 aaPredicted RBP8.49□□□□□ -1.05
CASP6-203ENST00000503684 NUTM2EB1AL46 878 aaPredicted RBP8.49□□□□□ -1.05
CASP6-203ENST00000503684 LCE2BO14633 110 aa8.49□□□□□ -1.05
CASP6-203ENST00000503684 GUCA2AQ02747 115 aa8.49□□□□□ -1.05
CASP6-203ENST00000503684 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
CASP6-203ENST00000503684 NUTM1Q86Y26 1132 aa8.49□□□□□ -1.05
CASP6-203ENST00000503684 NUTM2AQ8IVF1 878 aaPredicted RBP8.49□□□□□ -1.05
CASP6-203ENST00000503684 CABLES1Q8TDN4 633 aa8.49□□□□□ -1.05
CASP6-203ENST00000503684 CARD14Q9BXL6 1004 aa8.49□□□□□ -1.05
CASP6-203ENST00000503684 ARHGEF10O15013 1369 aa8.48□□□□□ -1.05
CASP6-203ENST00000503684 JCADQ9P266 1359 aa8.48□□□□□ -1.05
CASP6-203ENST00000503684 SSH2Q76I76 1423 aa8.48□□□□□ -1.05
CASP6-203ENST00000503684 ZBTB7CA1YPR0 619 aa8.48□□□□□ -1.05
CASP6-203ENST00000503684 USB1Q9BQ65 265 aaKnown RBP8.48□□□□□ -1.05
CASP6-203ENST00000503684 GGNBP2Q9H3C7 697 aa8.48□□□□□ -1.05
CASP6-203ENST00000503684 KNSTRNQ9Y448 316 aa8.48□□□□□ -1.05
CASP6-203ENST00000503684 TTC21AQ8NDW8 1320 aa8.48□□□□□ -1.05
CASP6-203ENST00000503684 TRIM66O15016 1216 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 RPIAP49247 311 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 PRR20EP86478 221 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 PRR20CP86479 221 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 PRR20DP86480 221 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 PRR20BP86481 221 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 PRR20AP86496 221 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 TRAF7Q6Q0C0 670 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 AK7Q96M32 723 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 CGNL1Q0VF96 1302 aa8.47□□□□□ -1.05
CASP6-203ENST00000503684 BRD4O60885 1362 aaPredicted RBP8.47□□□□□ -1.05
CASP6-203ENST00000503684 TRPM3Q9HCF6 1732 aaPredicted RBP8.46□□□□□ -1.05
CASP6-203ENST00000503684 ADAMTS2O95450 1211 aa8.46□□□□□ -1.06
CASP6-203ENST00000503684 TNNT2P45379 298 aaPredicted RBP8.46□□□□□ -1.06
CASP6-203ENST00000503684 MMP16P51512 607 aa8.46□□□□□ -1.06
CASP6-203ENST00000503684 CC2D1BQ5T0F9 858 aaKnown RBP8.46□□□□□ -1.06
CASP6-203ENST00000503684 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.06
CASP6-203ENST00000503684 SPIRE2Q8WWL2 714 aa8.46□□□□□ -1.06
CASP6-203ENST00000503684 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.06
CASP6-203ENST00000503684 NRKQ7Z2Y5 1582 aa8.46□□□□□ -1.06
CASP6-203ENST00000503684 MON2Q7Z3U7 1717 aa8.46□□□□□ -1.06
CASP6-203ENST00000503684 AKAP12Q02952 1782 aa8.45□□□□□ -1.06
CASP6-203ENST00000503684 FYB1O15117 783 aa8.45□□□□□ -1.06
CASP6-203ENST00000503684 GDF9O60383 454 aa8.45□□□□□ -1.06
CASP6-203ENST00000503684 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms