RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 PHRF1Q9P1Y6 1649 aaKnown RBP23.92■■□□□ 1.42
LIMS2-215ENST00000484252 HSP90AB4PQ58FF6 505 aa23.91■■□□□ 1.42
LIMS2-215ENST00000484252 RHPN1Q8TCX5 695 aa23.91■■□□□ 1.42
LIMS2-215ENST00000484252 RRP9O43818 475 aaKnown RBP23.91■■□□□ 1.42
LIMS2-215ENST00000484252 BRD1O95696 1058 aa23.91■■□□□ 1.42
LIMS2-215ENST00000484252 UNC5CLQ8IV45 518 aa23.91■■□□□ 1.42
LIMS2-215ENST00000484252 DNAAF4Q8WXU2 420 aa23.9■■□□□ 1.42
LIMS2-215ENST00000484252 IL1RAPL2Q9NP60 686 aa23.9■■□□□ 1.42
LIMS2-215ENST00000484252 LMO7Q8WWI1 1683 aa23.9■■□□□ 1.42
LIMS2-215ENST00000484252 MBD3O95983 291 aa23.9■■□□□ 1.42
LIMS2-215ENST00000484252 HSPA4P34932 840 aa23.9■■□□□ 1.42
LIMS2-215ENST00000484252 NBPF6Q5VWK0 638 aa23.9■■□□□ 1.42
LIMS2-215ENST00000484252 NBPF4Q96M43 638 aa23.9■■□□□ 1.42
LIMS2-215ENST00000484252 AKAP4Q5JQC9 854 aa23.89■■□□□ 1.41
LIMS2-215ENST00000484252 BEND3Q5T5X7 828 aa23.89■■□□□ 1.41
LIMS2-215ENST00000484252 GPT2Q8TD30 523 aa23.89■■□□□ 1.41
LIMS2-215ENST00000484252 SRGAP3O43295 1099 aa23.88■■□□□ 1.41
LIMS2-215ENST00000484252 EIF2S2P20042 333 aaKnown RBP23.88■■□□□ 1.41
LIMS2-215ENST00000484252 NUTM1Q86Y26 1132 aa23.88■■□□□ 1.41
LIMS2-215ENST00000484252 PI4K2BQ8TCG2 481 aa23.88■■□□□ 1.41
LIMS2-215ENST00000484252 ERBB4Q15303 1308 aa23.88■■□□□ 1.41
LIMS2-215ENST00000484252 CHD2O14647 1828 aaKnown RBP23.88■■□□□ 1.41
LIMS2-215ENST00000484252 CHPF2Q9P2E5 772 aa23.88■■□□□ 1.41
LIMS2-215ENST00000484252 NCAPD2Q15021 1401 aa23.87■■□□□ 1.41
LIMS2-215ENST00000484252 OVOS2A0A0G2JMS6 1433 aa23.87■■□□□ 1.41
LIMS2-215ENST00000484252 TEFQ10587 303 aa23.87■■□□□ 1.41
LIMS2-215ENST00000484252 PLEKHO1Q53GL0 409 aaPredicted RBP23.87■■□□□ 1.41
LIMS2-215ENST00000484252 CNTROBQ8N137 903 aa23.87■■□□□ 1.41
LIMS2-215ENST00000484252 LGR6Q9HBX8 967 aa23.87■■□□□ 1.41
LIMS2-215ENST00000484252 USP42Q9H9J4 1324 aaKnown RBP23.86■■□□□ 1.41
LIMS2-215ENST00000484252 AMOTQ4VCS5 1084 aa23.85■■□□□ 1.41
LIMS2-215ENST00000484252 RAD50Q92878 1312 aa23.85■■□□□ 1.41
LIMS2-215ENST00000484252 PI4KAP2A4QPH2 592 aa23.85■■□□□ 1.41
LIMS2-215ENST00000484252 SGSM2O43147 1006 aa23.85■■□□□ 1.41
LIMS2-215ENST00000484252 NBPF7P0C2Y1 421 aaPredicted RBP23.85■■□□□ 1.41
LIMS2-215ENST00000484252 PI4KAP1Q8N8J0 262 aa23.85■■□□□ 1.41
LIMS2-215ENST00000484252 HDAC5Q9UQL6 1122 aa23.85■■□□□ 1.41
LIMS2-215ENST00000484252 BTBD11A6QL63 1104 aa23.84■■□□□ 1.41
LIMS2-215ENST00000484252 NAP1L5Q96NT1 182 aaPredicted RBP23.84■■□□□ 1.41
LIMS2-215ENST00000484252 TTC41PQ6P2S7 1318 aa23.84■■□□□ 1.41
LIMS2-215ENST00000484252 PLEKHG5O94827 1062 aa23.83■■□□□ 1.41
LIMS2-215ENST00000484252 PSME1Q06323 249 aa23.83■■□□□ 1.41
LIMS2-215ENST00000484252 MTX1Q13505 466 aa23.83■■□□□ 1.41
LIMS2-215ENST00000484252 HSP90AA2PQ14568 343 aaPredicted RBP23.83■■□□□ 1.41
LIMS2-215ENST00000484252 ZNF530Q6P9A1 599 aaPredicted RBP23.83■■□□□ 1.41
LIMS2-215ENST00000484252 HS1BP3Q53T59 392 aa23.83■■□□□ 1.41
LIMS2-215ENST00000484252 DBF4Q9UBU7 674 aaPredicted RBP23.83■■□□□ 1.41
LIMS2-215ENST00000484252 CRYBG1Q9Y4K1 1723 aa23.83■■□□□ 1.4
LIMS2-215ENST00000484252 LRSAM1Q6UWE0 723 aa23.82■■□□□ 1.4
LIMS2-215ENST00000484252 ANKLE2Q86XL3 938 aa23.82■■□□□ 1.4
LIMS2-215ENST00000484252 ADCY9O60503 1353 aa23.82■■□□□ 1.4
LIMS2-215ENST00000484252 ALDH1L1O75891 902 aa23.82■■□□□ 1.4
LIMS2-215ENST00000484252 UPF3BQ9BZI7 483 aaKnown RBP23.82■■□□□ 1.4
LIMS2-215ENST00000484252 RBSNQ9H1K0 784 aa23.82■■□□□ 1.4
LIMS2-215ENST00000484252 WDR33Q9C0J8 1336 aaKnown RBP23.81■■□□□ 1.4
LIMS2-215ENST00000484252 TRHP20396 242 aaPredicted RBP23.81■■□□□ 1.4
LIMS2-215ENST00000484252 PRIM1P49642 420 aaKnown RBP23.81■■□□□ 1.4
LIMS2-215ENST00000484252 ZSCAN30Q86W11 494 aa23.81■■□□□ 1.4
LIMS2-215ENST00000484252 IL25Q9H293 177 aa23.81■■□□□ 1.4
LIMS2-215ENST00000484252 GLRX3O76003 335 aaKnown RBP23.8■■□□□ 1.4
LIMS2-215ENST00000484252 DNAJC5Q9H3Z4 198 aa23.8■■□□□ 1.4
LIMS2-215ENST00000484252 TMEM63CQ9P1W3 806 aa23.8■■□□□ 1.4
LIMS2-215ENST00000484252 RBM27Q9P2N5 1060 aaKnown RBP23.8■■□□□ 1.4
LIMS2-215ENST00000484252 KCNQ3O43525 872 aa23.8■■□□□ 1.4
LIMS2-215ENST00000484252 C1orf141Q5JVX7 400 aa23.79■■□□□ 1.4
LIMS2-215ENST00000484252 KIAA1211Q6ZU35 1233 aa23.79■■□□□ 1.4
LIMS2-215ENST00000484252 LSG1Q9H089 658 aaKnown RBP23.79■■□□□ 1.4
LIMS2-215ENST00000484252 RNMTO43148 476 aaKnown RBP23.79■■□□□ 1.4
LIMS2-215ENST00000484252 ESCO1Q5FWF5 840 aa23.79■■□□□ 1.4
LIMS2-215ENST00000484252 FOXD4L5Q5VV16 416 aaPredicted RBP23.79■■□□□ 1.4
LIMS2-215ENST00000484252 NOL8Q76FK4 1167 aaKnown RBP23.79■■□□□ 1.4
LIMS2-215ENST00000484252 ERC1Q8IUD2 1116 aa23.79■■□□□ 1.4
LIMS2-215ENST00000484252 FOXD4L4Q8WXT5 416 aaPredicted RBP23.79■■□□□ 1.4
LIMS2-215ENST00000484252 SYAP1Q96A49 352 aaPredicted RBP23.79■■□□□ 1.4
LIMS2-215ENST00000484252 ZNF142P52746 1687 aaPredicted RBP23.78■■□□□ 1.4
LIMS2-215ENST00000484252 RUFY2Q8WXA3 655 aa23.78■■□□□ 1.4
LIMS2-215ENST00000484252 PDLIM2Q96JY6 352 aa23.78■■□□□ 1.4
LIMS2-215ENST00000484252 SNX14Q9Y5W7 946 aa23.78■■□□□ 1.4
LIMS2-215ENST00000484252 MAP4K4O95819 1239 aaPredicted RBP23.77■■□□□ 1.4
LIMS2-215ENST00000484252 OS9Q13438 667 aaPredicted RBP23.77■■□□□ 1.4
LIMS2-215ENST00000484252 CLASRPQ8N2M8 674 aaKnown RBP23.77■■□□□ 1.4
LIMS2-215ENST00000484252 SLIT3O75094 1523 aa23.77■■□□□ 1.4
LIMS2-215ENST00000484252 LMTK3Q96Q04 1460 aa23.77■■□□□ 1.4
LIMS2-215ENST00000484252 RGPD2P0DJD1 1756 aa23.77■■□□□ 1.4
LIMS2-215ENST00000484252 MPRIPQ6WCQ1 1025 aa23.77■■□□□ 1.4
LIMS2-215ENST00000484252 GPATCH3Q96I76 525 aa23.77■■□□□ 1.4
LIMS2-215ENST00000484252 HEG1Q9ULI3 1381 aa23.77■■□□□ 1.39
LIMS2-215ENST00000484252 KSR2Q6VAB6 950 aa23.76■■□□□ 1.39
LIMS2-215ENST00000484252 TTC14Q96N46 770 aa23.76■■□□□ 1.39
LIMS2-215ENST00000484252 LRRC59Q96AG4 307 aaKnown RBP23.75■■□□□ 1.39
LIMS2-215ENST00000484252 SYCE3A1L190 88 aa23.75■■□□□ 1.39
LIMS2-215ENST00000484252 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
LIMS2-215ENST00000484252 ARHGEF25Q86VW2 580 aa23.75■■□□□ 1.39
LIMS2-215ENST00000484252 CHAMP1Q96JM3 812 aa23.75■■□□□ 1.39
LIMS2-215ENST00000484252 NSFL1CQ9UNZ2 370 aaKnown RBP23.75■■□□□ 1.39
LIMS2-215ENST00000484252 GIGYF1O75420 1035 aaPredicted RBP23.74■■□□□ 1.39
LIMS2-215ENST00000484252 C9orf78Q9NZ63 289 aaPredicted RBP23.74■■□□□ 1.39
LIMS2-215ENST00000484252 MAP3K2Q9Y2U5 619 aa23.74■■□□□ 1.39
LIMS2-215ENST00000484252 VSIG10Q8N0Z9 540 aa23.74■■□□□ 1.39
LIMS2-215ENST00000484252 DIAPH3Q9NSV4 1193 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms