RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	RGS3	P49796	1198 aa		12.05	□□□□□ -0.48
ATG7-223	ENST00000478638	NKX1-1	Q15270	411 aa	Predicted RBP	12.05	□□□□□ -0.48
ATG7-223	ENST00000478638	GCC1	Q96CN9	775 aa		12.05	□□□□□ -0.48
ATG7-223	ENST00000478638	DCAF5	Q96JK2	942 aa		12.05	□□□□□ -0.48
ATG7-223	ENST00000478638	MRC1	P22897	1456 aa		12.05	□□□□□ -0.48
ATG7-223	ENST00000478638	KCNQ2	O43526	872 aa		12.04	□□□□□ -0.48
ATG7-223	ENST00000478638	NUCB1	Q02818	461 aa		12.04	□□□□□ -0.48
ATG7-223	ENST00000478638	MPRIP	Q6WCQ1	1025 aa		12.04	□□□□□ -0.48
ATG7-223	ENST00000478638	SIRT2	Q8IXJ6	389 aa		12.04	□□□□□ -0.48
ATG7-223	ENST00000478638	ANP32E	Q9BTT0	268 aa		12.04	□□□□□ -0.48
ATG7-223	ENST00000478638	ERVV-2	B6SEH9	535 aa		12.03	□□□□□ -0.48
ATG7-223	ENST00000478638	BAG6	P46379	1132 aa		12.03	□□□□□ -0.48
ATG7-223	ENST00000478638	CABP4	P57796	275 aa		12.03	□□□□□ -0.48
ATG7-223	ENST00000478638	BCL9	O00512	1426 aa		12.03	□□□□□ -0.48
ATG7-223	ENST00000478638	RNMT	O43148	476 aa	Known RBP	12.02	□□□□□ -0.49
ATG7-223	ENST00000478638	CCDC30	Q5VVM6	783 aa		12.02	□□□□□ -0.49
ATG7-223	ENST00000478638	CHMP4A	Q9BY43	222 aa		12.02	□□□□□ -0.49
ATG7-223	ENST00000478638	TMOD3	Q9NYL9	352 aa		12.02	□□□□□ -0.49
ATG7-223	ENST00000478638	NOP58	Q9Y2X3	529 aa	Known RBP	12.02	□□□□□ -0.49
ATG7-223	ENST00000478638	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.02	□□□□□ -0.49
ATG7-223	ENST00000478638	CCT4	P50991	539 aa	Known RBP	12.01	□□□□□ -0.49
ATG7-223	ENST00000478638	EIF4A1	P60842	406 aa	Known RBP	12.01	□□□□□ -0.49
ATG7-223	ENST00000478638	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.01	□□□□□ -0.49
ATG7-223	ENST00000478638	ANKRD44	Q8N8A2	993 aa		12.01	□□□□□ -0.49
ATG7-223	ENST00000478638	LGR6	Q9HBX8	967 aa		12.01	□□□□□ -0.49
ATG7-223	ENST00000478638	MIS18A	Q9NYP9	233 aa		12.01	□□□□□ -0.49
ATG7-223	ENST00000478638	SLC4A2	P04920	1241 aa		12	□□□□□ -0.49
ATG7-223	ENST00000478638	G2E3	Q7L622	706 aa		12	□□□□□ -0.49
ATG7-223	ENST00000478638	PTF1A	Q7RTS3	328 aa		12	□□□□□ -0.49
ATG7-223	ENST00000478638	DDRGK1	Q96HY6	314 aa		12	□□□□□ -0.49
ATG7-223	ENST00000478638	DCTPP1	Q9H773	170 aa		12	□□□□□ -0.49
ATG7-223	ENST00000478638	EN1	Q05925	392 aa	Predicted RBP	11.99	□□□□□ -0.49
ATG7-223	ENST00000478638	TEF	Q10587	303 aa		11.99	□□□□□ -0.49
ATG7-223	ENST00000478638	DEFB132	Q7Z7B7	95 aa		11.99	□□□□□ -0.49
ATG7-223	ENST00000478638	CHD1L	Q86WJ1	897 aa		11.99	□□□□□ -0.49
ATG7-223	ENST00000478638	NFATC2IP	Q8NCF5	419 aa		11.99	□□□□□ -0.49
ATG7-223	ENST00000478638	PIGB	Q92521	554 aa		11.99	□□□□□ -0.49
ATG7-223	ENST00000478638	KDM6A	O15550	1401 aa	Predicted RBP	11.98	□□□□□ -0.49
ATG7-223	ENST00000478638	PLSCR1	O15162	318 aa		11.98	□□□□□ -0.49
ATG7-223	ENST00000478638	FLII	Q13045	1269 aa		11.98	□□□□□ -0.49
ATG7-223	ENST00000478638	CEP85	Q6P2H3	762 aa		11.98	□□□□□ -0.49
ATG7-223	ENST00000478638	SMARCC1	Q92922	1105 aa	Predicted RBP	11.98	□□□□□ -0.49
ATG7-223	ENST00000478638	STK31	Q9BXU1	1019 aa		11.98	□□□□□ -0.49
ATG7-223	ENST00000478638	SLC52A2	Q9HAB3	445 aa		11.98	□□□□□ -0.49
ATG7-223	ENST00000478638	BMP2KL	Q5H9B9	411 aa		11.97	□□□□□ -0.49
ATG7-223	ENST00000478638	EZH2	Q15910	746 aa	Known RBP	11.96	□□□□□ -0.49
ATG7-223	ENST00000478638	CAMKK2	Q96RR4	588 aa		11.96	□□□□□ -0.49
ATG7-223	ENST00000478638	MEIS3	Q99687	375 aa		11.96	□□□□□ -0.49
ATG7-223	ENST00000478638	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.96	□□□□□ -0.49
ATG7-223	ENST00000478638	BRWD3	Q6RI45	1802 aa		11.95	□□□□□ -0.5
ATG7-223	ENST00000478638	TUBGCP6	Q96RT7	1819 aa		11.95	□□□□□ -0.5
ATG7-223	ENST00000478638	SHANK3	Q9BYB0	1731 aa		11.95	□□□□□ -0.5
ATG7-223	ENST00000478638	EP400	Q96L91	3159 aa		11.95	□□□□□ -0.5
ATG7-223	ENST00000478638	SEC24B	O95487	1268 aa		11.95	□□□□□ -0.5
ATG7-223	ENST00000478638	TBC1D32	Q96NH3	1257 aa		11.95	□□□□□ -0.5
ATG7-223	ENST00000478638	C1orf115	Q9H7X2	142 aa		11.95	□□□□□ -0.5
ATG7-223	ENST00000478638	ASAP1	Q9ULH1	1129 aa		11.95	□□□□□ -0.5
ATG7-223	ENST00000478638	C5	P01031	1676 aa		11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	PAPPA	Q13219	1627 aa		11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	BTBD11	A6QL63	1104 aa		11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	HMGB2	P26583	209 aa	Known RBP	11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	TXNRD1	Q16881	649 aa		11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	HDGFL1	Q5TGJ6	251 aa		11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	TTC5	Q8N0Z6	440 aa		11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	RBM42	Q9BTD8	480 aa	Known RBP	11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	ATG3	Q9NT62	314 aa		11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	LAMB4	A4D0S4	1761 aa		11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	UBR2	Q8IWV8	1755 aa		11.94	□□□□□ -0.5
ATG7-223	ENST00000478638	GIGYF1	O75420	1035 aa	Predicted RBP	11.93	□□□□□ -0.5
ATG7-223	ENST00000478638	GNAI3	P08754	354 aa		11.93	□□□□□ -0.5
ATG7-223	ENST00000478638	SLC27A3	Q5K4L6	730 aa		11.93	□□□□□ -0.5
ATG7-223	ENST00000478638		F6X3S4	739 aa		11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	KCNQ3	O43525	872 aa		11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	PTCD1	O75127	700 aa	Known RBP	11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	SLC39A6	Q13433	755 aa		11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	NBPF14	Q5TI25	921 aa		11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	PROM2	Q8N271	834 aa		11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	LNPK	Q9C0E8	428 aa		11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	CCNL1	Q9UK58	526 aa	Predicted RBP	11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	WNK3	Q9BYP7	1800 aa		11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	ADCY9	O60503	1353 aa		11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	PALLD	Q8WX93	1383 aa		11.92	□□□□□ -0.5
ATG7-223	ENST00000478638	LOC102724428	A0A0B4J2F2	783 aa		11.91	□□□□□ -0.5
ATG7-223	ENST00000478638	GNAI2	P04899	355 aa		11.91	□□□□□ -0.5
ATG7-223	ENST00000478638	ATP6V1A	P38606	617 aa		11.91	□□□□□ -0.5
ATG7-223	ENST00000478638	SIK1	P57059	783 aa		11.91	□□□□□ -0.5
ATG7-223	ENST00000478638	ANKRD45	Q5TZF3	282 aa		11.91	□□□□□ -0.5
ATG7-223	ENST00000478638	NPM2	Q86SE8	214 aa	Known RBP	11.91	□□□□□ -0.5
ATG7-223	ENST00000478638	SALL3	Q9BXA9	1300 aa		11.9	□□□□□ -0.5
ATG7-223	ENST00000478638	HMMR	O75330	724 aa		11.9	□□□□□ -0.5
ATG7-223	ENST00000478638	KCNQ4	P56696	695 aa		11.9	□□□□□ -0.5
ATG7-223	ENST00000478638	ATP8B2	P98198	1209 aa		11.9	□□□□□ -0.5
ATG7-223	ENST00000478638	FKBP5	Q13451	457 aa	Predicted RBP	11.9	□□□□□ -0.5
ATG7-223	ENST00000478638	ZNF790	Q6PG37	636 aa		11.9	□□□□□ -0.5
ATG7-223	ENST00000478638	PLEKHM2	Q8IWE5	1019 aa		11.9	□□□□□ -0.5
ATG7-223	ENST00000478638	USP44	Q9H0E7	712 aa		11.9	□□□□□ -0.5
ATG7-223	ENST00000478638	OSBPL3	Q9H4L5	887 aa		11.9	□□□□□ -0.5
ATG7-223	ENST00000478638	BEND3	Q5T5X7	828 aa		11.89	□□□□□ -0.51
ATG7-223	ENST00000478638	LRRC4B	Q9NT99	713 aa		11.89	□□□□□ -0.51
ATG7-223	ENST00000478638	DBF4	Q9UBU7	674 aa	Predicted RBP	11.89	□□□□□ -0.51

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