RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
NPHP4-208ENST00000478423 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
NPHP4-208ENST00000478423 MAST1Q9Y2H9 1570 aa16.81■□□□□ 0.28
NPHP4-208ENST00000478423 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
NPHP4-208ENST00000478423 CCDC43Q96MW1 224 aaKnown RBP16.81■□□□□ 0.28
NPHP4-208ENST00000478423 TTC22Q5TAA0 569 aa16.81■□□□□ 0.28
NPHP4-208ENST00000478423 TEX13AQ9BXU3 409 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-208ENST00000478423 CWC25Q9NXE8 425 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-208ENST00000478423 LDHAL6AQ6ZMR3 332 aa16.8■□□□□ 0.28
NPHP4-208ENST00000478423 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
NPHP4-208ENST00000478423 SPATA32Q96LK8 384 aa16.8■□□□□ 0.28
NPHP4-208ENST00000478423 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
NPHP4-208ENST00000478423 ZPR1O75312 459 aa16.8■□□□□ 0.28
NPHP4-208ENST00000478423 MBD5Q9P267 1494 aa16.8■□□□□ 0.28
NPHP4-208ENST00000478423 TNMDQ9H2S6 317 aa16.8■□□□□ 0.28
NPHP4-208ENST00000478423 CCDC192P0DO97 292 aa16.8■□□□□ 0.28
NPHP4-208ENST00000478423 ATP10AO60312 1499 aa16.79■□□□□ 0.28
NPHP4-208ENST00000478423 CCDC39Q9UFE4 941 aa16.79■□□□□ 0.28
NPHP4-208ENST00000478423 PPP1R1BQ9UD71 204 aaPredicted RBP16.79■□□□□ 0.28
NPHP4-208ENST00000478423 ANKRD18BA2A2Z9 1011 aa16.79■□□□□ 0.28
NPHP4-208ENST00000478423 CDKL5O76039 1030 aa16.79■□□□□ 0.28
NPHP4-208ENST00000478423 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
NPHP4-208ENST00000478423 SNRKQ9NRH2 765 aa16.79■□□□□ 0.28
NPHP4-208ENST00000478423 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-208ENST00000478423 CFAP45Q9UL16 551 aa16.78■□□□□ 0.28
NPHP4-208ENST00000478423 ZFYVE9O95405 1425 aa16.78■□□□□ 0.28
NPHP4-208ENST00000478423 SDSP20132 328 aa16.78■□□□□ 0.28
NPHP4-208ENST00000478423 HSP90AA2PQ14568 343 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-208ENST00000478423 LARP6Q9BRS8 491 aaKnown RBP16.78■□□□□ 0.28
NPHP4-208ENST00000478423 GRPEL1Q9HAV7 217 aa16.78■□□□□ 0.28
NPHP4-208ENST00000478423 TXLNAP40222 546 aa16.77■□□□□ 0.28
NPHP4-208ENST00000478423 PIP4K2AP48426 406 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-208ENST00000478423 MPNDQ8N594 471 aa16.77■□□□□ 0.28
NPHP4-208ENST00000478423 NFATC2IPQ8NCF5 419 aa16.77■□□□□ 0.28
NPHP4-208ENST00000478423 GOLIM4O00461 696 aa16.77■□□□□ 0.28
NPHP4-208ENST00000478423 HOXC9P31274 260 aa16.77■□□□□ 0.28
NPHP4-208ENST00000478423 PDE1AP54750 535 aa16.77■□□□□ 0.28
NPHP4-208ENST00000478423 CAVIN4Q5BKX8 364 aa16.77■□□□□ 0.28
NPHP4-208ENST00000478423 PDILTQ8N807 584 aa16.77■□□□□ 0.28
NPHP4-208ENST00000478423 MINDY4BA8MYZ0 360 aa16.76■□□□□ 0.27
NPHP4-208ENST00000478423 PDIA4P13667 645 aaKnown RBP16.76■□□□□ 0.27
NPHP4-208ENST00000478423 KSR2Q6VAB6 950 aa16.76■□□□□ 0.27
NPHP4-208ENST00000478423 NAPBQ9H115 298 aa16.76■□□□□ 0.27
NPHP4-208ENST00000478423 ZBTB40Q9NUA8 1239 aa16.76■□□□□ 0.27
NPHP4-208ENST00000478423 LIMCH1Q9UPQ0 1083 aa16.76■□□□□ 0.27
NPHP4-208ENST00000478423 GRM8O00222 908 aa16.76■□□□□ 0.27
NPHP4-208ENST00000478423 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
NPHP4-208ENST00000478423 GOLGA6L1Q8N7Z2 621 aa16.76■□□□□ 0.27
NPHP4-208ENST00000478423 SMC2O95347 1197 aa16.76■□□□□ 0.27
NPHP4-208ENST00000478423 MAP3K12Q12852 859 aa16.76■□□□□ 0.27
NPHP4-208ENST00000478423 A0A0U1RQG5 324 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-208ENST00000478423 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-208ENST00000478423 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-208ENST00000478423 SSFA2P28290 1259 aa16.75■□□□□ 0.27
NPHP4-208ENST00000478423 IP6K1Q92551 441 aa16.75■□□□□ 0.27
NPHP4-208ENST00000478423 FAM13BQ9NYF5 915 aa16.75■□□□□ 0.27
NPHP4-208ENST00000478423 PTPRTO14522 1441 aa16.75■□□□□ 0.27
NPHP4-208ENST00000478423 IL13P35225 146 aa16.75■□□□□ 0.27
NPHP4-208ENST00000478423 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
NPHP4-208ENST00000478423 ATP8B2P98198 1209 aa16.75■□□□□ 0.27
NPHP4-208ENST00000478423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.279e-7■■■■■ 44.3
NPHP4-208ENST00000478423 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
NPHP4-208ENST00000478423 CCDC173Q0VFZ6 552 aa16.74■□□□□ 0.27
NPHP4-208ENST00000478423 SPC24Q8NBT2 197 aa16.74■□□□□ 0.27
NPHP4-208ENST00000478423 TRPM2O94759 1503 aa16.74■□□□□ 0.27
NPHP4-208ENST00000478423 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
NPHP4-208ENST00000478423 ORAI2Q96SN7 254 aa16.74■□□□□ 0.27
NPHP4-208ENST00000478423 NUP62CLQ9H1M0 184 aa16.74■□□□□ 0.27
NPHP4-208ENST00000478423 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-208ENST00000478423 SLC5A1P13866 664 aa16.73■□□□□ 0.27
NPHP4-208ENST00000478423 ZSCAN29Q8IWY8 852 aaPredicted RBP16.73■□□□□ 0.27
NPHP4-208ENST00000478423 PIBF1Q8WXW3 757 aa16.73■□□□□ 0.27
NPHP4-208ENST00000478423 LMBR1LQ6UX01 489 aa16.73■□□□□ 0.27
NPHP4-208ENST00000478423 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
NPHP4-208ENST00000478423 CDK5RAP3Q96JB5 506 aa16.73■□□□□ 0.27
NPHP4-208ENST00000478423 SPATA31E1Q6ZUB1 1445 aa16.73■□□□□ 0.27
NPHP4-208ENST00000478423 TNPO1Q92973 898 aaKnown RBP16.73■□□□□ 0.27
NPHP4-208ENST00000478423 ZNF213O14771 459 aa16.72■□□□□ 0.27
NPHP4-208ENST00000478423 DCTPP1Q9H773 170 aa16.72■□□□□ 0.27
NPHP4-208ENST00000478423 R3HCC1Q9Y3T6 440 aaKnown RBP16.72■□□□□ 0.27
NPHP4-208ENST00000478423 MAP3K5Q99683 1374 aa16.72■□□□□ 0.27
NPHP4-208ENST00000478423 EDC4Q6P2E9 1401 aaKnown RBP16.72■□□□□ 0.27
NPHP4-208ENST00000478423 SYCE3A1L190 88 aa16.72■□□□□ 0.27
NPHP4-208ENST00000478423 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
NPHP4-208ENST00000478423 DDX46Q7L014 1031 aaKnown RBP16.72■□□□□ 0.27
NPHP4-208ENST00000478423 ANKIB1Q9P2G1 1089 aa16.72■□□□□ 0.27
NPHP4-208ENST00000478423 TRIM35Q9UPQ4 493 aa16.72■□□□□ 0.27
NPHP4-208ENST00000478423 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
NPHP4-208ENST00000478423 BRPF1P55201 1214 aaPredicted RBP16.71■□□□□ 0.27
NPHP4-208ENST00000478423 CWF19L2Q2TBE0 894 aaKnown RBP16.71■□□□□ 0.27
NPHP4-208ENST00000478423 SOGA3Q5TF21 947 aa16.71■□□□□ 0.27
NPHP4-208ENST00000478423 CCDC82Q8N4S0 544 aa16.71■□□□□ 0.27
NPHP4-208ENST00000478423 C8orf34Q49A92 452 aa16.71■□□□□ 0.27
NPHP4-208ENST00000478423 PA2G4Q9UQ80 394 aaKnown RBP16.71■□□□□ 0.27
NPHP4-208ENST00000478423 PHAXQ9H814 394 aaKnown RBP16.7■□□□□ 0.26
NPHP4-208ENST00000478423 NOL7Q9UMY1 257 aaKnown RBP16.7■□□□□ 0.26
NPHP4-208ENST00000478423 CCDC70Q6NSX1 233 aa16.7■□□□□ 0.26
NPHP4-208ENST00000478423 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-208ENST00000478423 NEO1Q92859 1461 aa16.7■□□□□ 0.26
NPHP4-208ENST00000478423 OFD1O75665 1012 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms