RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 LTBP4Q8N2S1 1624 aa22.78■■□□□ 1.24
SEC61A2-213ENST00000475268 C16orf71Q8IYS4 520 aaPredicted RBP22.77■■□□□ 1.24
SEC61A2-213ENST00000475268 SMARCA5O60264 1052 aaPredicted RBP22.77■■□□□ 1.24
SEC61A2-213ENST00000475268 ATP8B2P98198 1209 aa22.77■■□□□ 1.24
SEC61A2-213ENST00000475268 PDIA6Q15084 440 aa22.77■■□□□ 1.24
SEC61A2-213ENST00000475268 KSR2Q6VAB6 950 aa22.77■■□□□ 1.24
SEC61A2-213ENST00000475268 FMNL2Q96PY5 1086 aa22.77■■□□□ 1.24
SEC61A2-213ENST00000475268 C5P01031 1676 aa22.77■■□□□ 1.24
SEC61A2-213ENST00000475268 PNMA6EA0A0J9YXQ4 647 aa22.76■■□□□ 1.23
SEC61A2-213ENST00000475268 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
SEC61A2-213ENST00000475268 AIMP1Q12904 312 aaKnown RBP22.76■■□□□ 1.23
SEC61A2-213ENST00000475268 PLEKHM2Q8IWE5 1019 aa22.76■■□□□ 1.23
SEC61A2-213ENST00000475268 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
SEC61A2-213ENST00000475268 NBPF7P0C2Y1 421 aaPredicted RBP22.74■■□□□ 1.23
SEC61A2-213ENST00000475268 MYL6BP14649 208 aa22.74■■□□□ 1.23
SEC61A2-213ENST00000475268 EXOC6BQ9Y2D4 811 aa22.74■■□□□ 1.23
SEC61A2-213ENST00000475268 DDX58O95786 925 aaKnown RBP22.74■■□□□ 1.23
SEC61A2-213ENST00000475268 USP16Q9Y5T5 823 aa22.74■■□□□ 1.23
SEC61A2-213ENST00000475268 MFAP1P55081 439 aaKnown RBP22.73■■□□□ 1.23
SEC61A2-213ENST00000475268 NKX1-1Q15270 411 aaPredicted RBP22.73■■□□□ 1.23
SEC61A2-213ENST00000475268 ERVV-2B6SEH9 535 aa22.73■■□□□ 1.23
SEC61A2-213ENST00000475268 OTUD7AQ8TE49 926 aaPredicted RBP22.73■■□□□ 1.23
SEC61A2-213ENST00000475268 TBC1D32Q96NH3 1257 aa22.72■■□□□ 1.23
SEC61A2-213ENST00000475268 DAXXQ9UER7 740 aaPredicted RBP22.71■■□□□ 1.23
SEC61A2-213ENST00000475268 ALDH1L1O75891 902 aa22.7■■□□□ 1.23
SEC61A2-213ENST00000475268 SLC4A3P48751 1232 aa22.7■■□□□ 1.22
SEC61A2-213ENST00000475268 CWF19L2Q2TBE0 894 aaKnown RBP22.7■■□□□ 1.22
SEC61A2-213ENST00000475268 COL14A1Q05707 1796 aaKnown RBP22.7■■□□□ 1.22
SEC61A2-213ENST00000475268 GSPT1P15170 499 aaKnown RBP22.69■■□□□ 1.22
SEC61A2-213ENST00000475268 PIP4K2AP48426 406 aaPredicted RBP22.69■■□□□ 1.22
SEC61A2-213ENST00000475268 PPP1R42Q7Z4L9 355 aa22.69■■□□□ 1.22
SEC61A2-213ENST00000475268 RIC3Q7Z5B4 369 aa22.69■■□□□ 1.22
SEC61A2-213ENST00000475268 XAGE3Q8WTP9 111 aa22.69■■□□□ 1.22
SEC61A2-213ENST00000475268 C9orf78Q9NZ63 289 aaPredicted RBP22.69■■□□□ 1.22
SEC61A2-213ENST00000475268 SHANK3Q9BYB0 1731 aa22.69■■□□□ 1.22
SEC61A2-213ENST00000475268 COPS6Q7L5N1 327 aa22.69■■□□□ 1.22
SEC61A2-213ENST00000475268 COL22A1Q8NFW1 1626 aaPredicted RBP22.68■■□□□ 1.22
SEC61A2-213ENST00000475268 TTC22Q5TAA0 569 aa22.68■■□□□ 1.22
SEC61A2-213ENST00000475268 SSH3Q8TE77 659 aa22.68■■□□□ 1.22
SEC61A2-213ENST00000475268 LRRCC1Q9C099 1032 aa22.68■■□□□ 1.22
SEC61A2-213ENST00000475268 LINS1Q8NG48 757 aa22.67■■□□□ 1.22
SEC61A2-213ENST00000475268 C22orf23Q9BZE7 217 aa22.67■■□□□ 1.22
SEC61A2-213ENST00000475268 SRGAP3O43295 1099 aa22.66■■□□□ 1.22
SEC61A2-213ENST00000475268 IBTKQ9P2D0 1353 aaPredicted RBP22.66■■□□□ 1.22
SEC61A2-213ENST00000475268 COL16A1Q07092 1604 aaPredicted RBP22.65■■□□□ 1.22
SEC61A2-213ENST00000475268 POLA2Q14181 598 aa22.65■■□□□ 1.22
SEC61A2-213ENST00000475268 TBC1D9Q6ZT07 1266 aa22.65■■□□□ 1.22
SEC61A2-213ENST00000475268 PIP4K2BP78356 416 aa22.65■■□□□ 1.22
SEC61A2-213ENST00000475268 LRP10Q7Z4F1 713 aa22.65■■□□□ 1.22
SEC61A2-213ENST00000475268 PTCD1O75127 700 aaKnown RBP22.64■■□□□ 1.21
SEC61A2-213ENST00000475268 ADAMTS2O95450 1211 aa22.64■■□□□ 1.21
SEC61A2-213ENST00000475268 GLI3P10071 1580 aa22.64■■□□□ 1.21
SEC61A2-213ENST00000475268 PHLPP1O60346 1717 aa22.63■■□□□ 1.21
SEC61A2-213ENST00000475268 SURF6O75683 361 aaKnown RBP22.63■■□□□ 1.21
SEC61A2-213ENST00000475268 NEXNQ0ZGT2 675 aa22.63■■□□□ 1.21
SEC61A2-213ENST00000475268 ANKRD13DQ6ZTN6 518 aa22.63■■□□□ 1.21
SEC61A2-213ENST00000475268 CDC45O75419 566 aa22.63■■□□□ 1.21
SEC61A2-213ENST00000475268 TMOD3Q9NYL9 352 aa22.63■■□□□ 1.21
SEC61A2-213ENST00000475268 GRM8O00222 908 aa22.62■■□□□ 1.21
SEC61A2-213ENST00000475268 IGKV5-2P06315 115 aa22.62■■□□□ 1.21
SEC61A2-213ENST00000475268 METTL22Q9BUU2 404 aaPredicted RBP22.62■■□□□ 1.21
SEC61A2-213ENST00000475268 HDAC5Q9UQL6 1122 aa22.62■■□□□ 1.21
SEC61A2-213ENST00000475268 PDE1AP54750 535 aa22.61■■□□□ 1.21
SEC61A2-213ENST00000475268 MYD88Q99836 296 aa22.61■■□□□ 1.21
SEC61A2-213ENST00000475268 KCPQ6ZWJ8 1503 aa22.61■■□□□ 1.21
SEC61A2-213ENST00000475268 LAMB4A4D0S4 1761 aa22.61■■□□□ 1.21
SEC61A2-213ENST00000475268 TOM1O60784 492 aa22.6■■□□□ 1.21
SEC61A2-213ENST00000475268 UBR2Q8IWV8 1755 aa22.6■■□□□ 1.21
SEC61A2-213ENST00000475268 DISP2A7MBM2 1401 aa22.6■■□□□ 1.21
SEC61A2-213ENST00000475268 SDSP20132 328 aa22.6■■□□□ 1.21
SEC61A2-213ENST00000475268 OSBPL3Q9H4L5 887 aa22.6■■□□□ 1.21
SEC61A2-213ENST00000475268 TOGARAM1Q9Y4F4 1720 aa22.6■■□□□ 1.21
SEC61A2-213ENST00000475268 PAPPAQ13219 1627 aa22.59■■□□□ 1.21
SEC61A2-213ENST00000475268 NEURL1BA8MQ27 555 aa22.59■■□□□ 1.21
SEC61A2-213ENST00000475268 RAB11FIP3O75154 756 aa22.59■■□□□ 1.21
SEC61A2-213ENST00000475268 NBPF26B4DH59 902 aa22.59■■□□□ 1.21
SEC61A2-213ENST00000475268 NBPF14Q5TI25 921 aa22.59■■□□□ 1.21
SEC61A2-213ENST00000475268 NBPF10Q6P3W6 841 aaKnown RBP22.59■■□□□ 1.21
SEC61A2-213ENST00000475268 NBPF15Q8N660 670 aa22.59■■□□□ 1.21
SEC61A2-213ENST00000475268 IL1RAPL2Q9NP60 686 aa22.59■■□□□ 1.21
SEC61A2-213ENST00000475268 UTYO14607 1347 aa22.59■■□□□ 1.21
SEC61A2-213ENST00000475268 NUTM2BA6NNL0 878 aaPredicted RBP22.58■■□□□ 1.21
SEC61A2-213ENST00000475268 NUTM2EB1AL46 878 aaPredicted RBP22.58■■□□□ 1.21
SEC61A2-213ENST00000475268 MTX1Q13505 466 aa22.58■■□□□ 1.21
SEC61A2-213ENST00000475268 BECN1Q14457 450 aa22.58■■□□□ 1.21
SEC61A2-213ENST00000475268 NUTM2AQ8IVF1 878 aaPredicted RBP22.58■■□□□ 1.21
SEC61A2-213ENST00000475268 ERBB4Q15303 1308 aa22.58■■□□□ 1.21
SEC61A2-213ENST00000475268 MX1P20591 662 aa22.57■■□□□ 1.2
SEC61A2-213ENST00000475268 TSHZ3Q63HK5 1081 aa22.57■■□□□ 1.2
SEC61A2-213ENST00000475268 SUCLG2Q96I99 432 aa22.57■■□□□ 1.2
SEC61A2-213ENST00000475268 TNS2Q63HR2 1409 aa22.57■■□□□ 1.2
SEC61A2-213ENST00000475268 SALL3Q9BXA9 1300 aa22.57■■□□□ 1.2
SEC61A2-213ENST00000475268 EXOC5O00471 708 aa22.57■■□□□ 1.2
SEC61A2-213ENST00000475268 GCKRQ14397 625 aa22.57■■□□□ 1.2
SEC61A2-213ENST00000475268 PIGBQ92521 554 aa22.57■■□□□ 1.2
SEC61A2-213ENST00000475268 A1BGP04217 495 aa22.56■■□□□ 1.2
SEC61A2-213ENST00000475268 RHPN1Q8TCX5 695 aa22.56■■□□□ 1.2
SEC61A2-213ENST00000475268 PLBD2Q8NHP8 589 aa22.55■■□□□ 1.2
SEC61A2-213ENST00000475268 KIF1BPQ96EK5 621 aa22.55■■□□□ 1.2
SEC61A2-213ENST00000475268 KAZALD1Q96I82 304 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms