RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
CCNL1-212ENST00000470121 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
CCNL1-212ENST00000470121 NKX1-1Q15270 411 aaPredicted RBP17.24■□□□□ 0.35
CCNL1-212ENST00000470121 TBC1D9Q6ZT07 1266 aa17.24■□□□□ 0.35
CCNL1-212ENST00000470121 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
CCNL1-212ENST00000470121 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
CCNL1-212ENST00000470121 NBPF7P0C2Y1 421 aaPredicted RBP17.23■□□□□ 0.35
CCNL1-212ENST00000470121 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
CCNL1-212ENST00000470121 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
CCNL1-212ENST00000470121 RBM25P49756 843 aaKnown RBP17.22■□□□□ 0.35
CCNL1-212ENST00000470121 DAXXQ9UER7 740 aaPredicted RBP17.22■□□□□ 0.35
CCNL1-212ENST00000470121 EXOC6BQ9Y2D4 811 aa17.22■□□□□ 0.35
CCNL1-212ENST00000470121 SALL3Q9BXA9 1300 aa17.22■□□□□ 0.35
CCNL1-212ENST00000470121 APBB1O00213 710 aa17.22■□□□□ 0.35
CCNL1-212ENST00000470121 CABP4P57796 275 aa17.22■□□□□ 0.35
CCNL1-212ENST00000470121 LARP1Q6PKG0 1096 aaKnown RBP17.22■□□□□ 0.35
CCNL1-212ENST00000470121 PCDH11XQ9BZA7 1347 aa17.22■□□□□ 0.35
CCNL1-212ENST00000470121 PCDH11YQ9BZA8 1340 aa17.22■□□□□ 0.35
CCNL1-212ENST00000470121 CDC45O75419 566 aa17.21■□□□□ 0.35
CCNL1-212ENST00000470121 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
CCNL1-212ENST00000470121 IL2RBP14784 551 aa17.21■□□□□ 0.35
CCNL1-212ENST00000470121 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
CCNL1-212ENST00000470121 PPP1R42Q7Z4L9 355 aa17.2■□□□□ 0.34
CCNL1-212ENST00000470121 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
CCNL1-212ENST00000470121 LRRCC1Q9C099 1032 aa17.2■□□□□ 0.34
CCNL1-212ENST00000470121 USP16Q9Y5T5 823 aa17.2■□□□□ 0.34
CCNL1-212ENST00000470121 GLI3P10071 1580 aa17.2■□□□□ 0.34
CCNL1-212ENST00000470121 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
CCNL1-212ENST00000470121 BECN1Q14457 450 aa17.2■□□□□ 0.34
CCNL1-212ENST00000470121 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
CCNL1-212ENST00000470121 PDE1AP54750 535 aa17.19■□□□□ 0.34
CCNL1-212ENST00000470121 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
CCNL1-212ENST00000470121 LINS1Q8NG48 757 aa17.19■□□□□ 0.34
CCNL1-212ENST00000470121 UTYO14607 1347 aa17.19■□□□□ 0.34
CCNL1-212ENST00000470121 SHANK3Q9BYB0 1731 aa17.19■□□□□ 0.34
CCNL1-212ENST00000470121 EVA1CP58658 441 aa17.18■□□□□ 0.34
CCNL1-212ENST00000470121 MTX1Q13505 466 aa17.18■□□□□ 0.34
CCNL1-212ENST00000470121 RAB11FIP3O75154 756 aa17.18■□□□□ 0.34
CCNL1-212ENST00000470121 SDSP20132 328 aa17.18■□□□□ 0.34
CCNL1-212ENST00000470121 TBC1D2Q9BYX2 928 aa17.18■□□□□ 0.34
CCNL1-212ENST00000470121 STRN4Q9NRL3 753 aa17.18■□□□□ 0.34
CCNL1-212ENST00000470121 AHDC1Q5TGY3 1603 aaPredicted RBP17.17■□□□□ 0.34
CCNL1-212ENST00000470121 STAP2Q9UGK3 403 aa17.16■□□□□ 0.34
CCNL1-212ENST00000470121 ROBO1Q9Y6N7 1651 aa17.16■□□□□ 0.34
CCNL1-212ENST00000470121 LTBP4Q8N2S1 1624 aa17.16■□□□□ 0.34
CCNL1-212ENST00000470121 SRGAP3O43295 1099 aa17.16■□□□□ 0.34
CCNL1-212ENST00000470121 IGKV5-2P06315 115 aa17.16■□□□□ 0.34
CCNL1-212ENST00000470121 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
CCNL1-212ENST00000470121 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
CCNL1-212ENST00000470121 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
CCNL1-212ENST00000470121 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
CCNL1-212ENST00000470121 EIF5BO60841 1220 aaKnown RBP17.15■□□□□ 0.34
CCNL1-212ENST00000470121 MYL6BP14649 208 aa17.15■□□□□ 0.34
CCNL1-212ENST00000470121 NBR1Q14596 966 aa17.15■□□□□ 0.34
CCNL1-212ENST00000470121 BCL11AQ9H165 835 aa17.15■□□□□ 0.34
CCNL1-212ENST00000470121 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
CCNL1-212ENST00000470121 COL22A1Q8NFW1 1626 aaPredicted RBP17.15■□□□□ 0.34
CCNL1-212ENST00000470121 UBR2Q8IWV8 1755 aa17.14■□□□□ 0.34
CCNL1-212ENST00000470121 MYT1Q01538 1121 aa17.14■□□□□ 0.33
CCNL1-212ENST00000470121 KIF2CQ99661 725 aa17.14■□□□□ 0.33
CCNL1-212ENST00000470121 HDAC5Q9UQL6 1122 aa17.14■□□□□ 0.33
CCNL1-212ENST00000470121 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
CCNL1-212ENST00000470121 GRM8O00222 908 aa17.14■□□□□ 0.33
CCNL1-212ENST00000470121 SURF6O75683 361 aaKnown RBP17.14■□□□□ 0.33
CCNL1-212ENST00000470121 RIC3Q7Z5B4 369 aa17.14■□□□□ 0.33
CCNL1-212ENST00000470121 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
CCNL1-212ENST00000470121 METTL22Q9BUU2 404 aaPredicted RBP17.14■□□□□ 0.33
CCNL1-212ENST00000470121 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
CCNL1-212ENST00000470121 LAMB4A4D0S4 1761 aa17.13■□□□□ 0.33
CCNL1-212ENST00000470121 TUBGCP6Q96RT7 1819 aa17.13■□□□□ 0.33
CCNL1-212ENST00000470121 KCPQ6ZWJ8 1503 aa17.13■□□□□ 0.33
CCNL1-212ENST00000470121 MX1P20591 662 aa17.13■□□□□ 0.33
CCNL1-212ENST00000470121 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
CCNL1-212ENST00000470121 DDX54Q8TDD1 881 aaKnown RBP17.13■□□□□ 0.33
CCNL1-212ENST00000470121 COL14A1Q05707 1796 aaKnown RBP17.13■□□□□ 0.33
CCNL1-212ENST00000470121 ERBB4Q15303 1308 aa17.12■□□□□ 0.33
CCNL1-212ENST00000470121 ANKRD13DQ6ZTN6 518 aa17.12■□□□□ 0.33
CCNL1-212ENST00000470121 TNS2Q63HR2 1409 aa17.12■□□□□ 0.33
CCNL1-212ENST00000470121 AOX1Q06278 1338 aa17.12■□□□□ 0.33
CCNL1-212ENST00000470121 NEURL1BA8MQ27 555 aa17.12■□□□□ 0.33
CCNL1-212ENST00000470121 KIF1BPQ96EK5 621 aa17.12■□□□□ 0.33
CCNL1-212ENST00000470121 SUCLG2Q96I99 432 aa17.12■□□□□ 0.33
CCNL1-212ENST00000470121 DISP2A7MBM2 1401 aa17.11■□□□□ 0.33
CCNL1-212ENST00000470121 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
CCNL1-212ENST00000470121 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
CCNL1-212ENST00000470121 SNX21Q969T3 373 aa17.11■□□□□ 0.33
CCNL1-212ENST00000470121 COL16A1Q07092 1604 aaPredicted RBP17.11■□□□□ 0.33
CCNL1-212ENST00000470121 NBPF26B4DH59 902 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 NBPF14Q5TI25 921 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 NBPF10Q6P3W6 841 aaKnown RBP17.1■□□□□ 0.33
CCNL1-212ENST00000470121 NBPF15Q8N660 670 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 ANTXR1Q9H6X2 564 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
CCNL1-212ENST00000470121 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 GCKRQ14397 625 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 TSHZ3Q63HK5 1081 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 IL1RAPL2Q9NP60 686 aa17.1■□□□□ 0.33
CCNL1-212ENST00000470121 MYD88Q99836 296 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms