RNA–Protein interactions for RNA: ENST00000468598.5

SFPQ-205, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 2,835 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-205ENST00000468598 ILDR1Q86SU0 546 aaPredicted RBP8.69□□□□□ -1.02
SFPQ-205ENST00000468598 COL5A2P05997 1499 aaPredicted RBP8.69□□□□□ -1.02
SFPQ-205ENST00000468598 INTS3Q68E01 1043 aaKnown RBP8.69□□□□□ -1.02
SFPQ-205ENST00000468598 MCTP1Q6DN14 999 aa8.69□□□□□ -1.02
SFPQ-205ENST00000468598 API5Q9BZZ5 524 aaKnown RBP8.69□□□□□ -1.02
SFPQ-205ENST00000468598 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
SFPQ-205ENST00000468598 LMO7Q8WWI1 1683 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 ST18O60284 1047 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 VAMP4O75379 141 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 CASC1Q6TDU7 716 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 RBM42Q9BTD8 480 aaKnown RBP8.68□□□□□ -1.02
SFPQ-205ENST00000468598 USP26Q9BXU7 913 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 FOXD4L1Q9NU39 408 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 WDR17Q8IZU2 1322 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 MBD3O95983 291 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 GNAI1P63096 354 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 CAVIN1Q6NZI2 390 aaKnown RBP8.68□□□□□ -1.02
SFPQ-205ENST00000468598 LRSAM1Q6UWE0 723 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 RBSNQ9H1K0 784 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 IFT57Q9NWB7 429 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 USP21Q9UK80 565 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 AFF2P51816 1311 aa8.68□□□□□ -1.02
SFPQ-205ENST00000468598 TTC22Q5TAA0 569 aa8.67□□□□□ -1.02
SFPQ-205ENST00000468598 PLEKHM2Q8IWE5 1019 aa8.67□□□□□ -1.02
SFPQ-205ENST00000468598 DCTPP1Q9H773 170 aa8.67□□□□□ -1.02
SFPQ-205ENST00000468598 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.67□□□□□ -1.02
SFPQ-205ENST00000468598 SASS6Q6UVJ0 657 aa8.67□□□□□ -1.02
SFPQ-205ENST00000468598 SIRT2Q8IXJ6 389 aa8.67□□□□□ -1.02
SFPQ-205ENST00000468598 KLHL34Q8N239 644 aa8.67□□□□□ -1.02
SFPQ-205ENST00000468598 R3HCC1Q9Y3T6 440 aaKnown RBP8.67□□□□□ -1.02
SFPQ-205ENST00000468598 BCL9LQ86UU0 1499 aa8.67□□□□□ -1.02
SFPQ-205ENST00000468598 DCTN1Q14203 1278 aa8.67□□□□□ -1.02
SFPQ-205ENST00000468598 UNC5CLQ8IV45 518 aa8.67□□□□□ -1.02
SFPQ-205ENST00000468598 SMAP1Q8IYB5 467 aaPredicted RBP8.67□□□□□ -1.02
SFPQ-205ENST00000468598 THUMPD2Q9BTF0 503 aaKnown RBP8.67□□□□□ -1.02
SFPQ-205ENST00000468598 PLCH1Q4KWH8 1693 aa8.66□□□□□ -1.02
SFPQ-205ENST00000468598 RGPD1P0DJD0 1748 aa8.66□□□□□ -1.02
SFPQ-205ENST00000468598 GSPT1P15170 499 aaKnown RBP8.66□□□□□ -1.02
SFPQ-205ENST00000468598 NCLP19338 710 aaKnown RBP8.66□□□□□ -1.02
SFPQ-205ENST00000468598 PRIM1P49642 420 aaKnown RBP8.66□□□□□ -1.02
SFPQ-205ENST00000468598 NFE2L2Q16236 605 aa8.66□□□□□ -1.02
SFPQ-205ENST00000468598 MTHFSDQ2M296 383 aaKnown RBP8.66□□□□□ -1.02
SFPQ-205ENST00000468598 FNBP4Q8N3X1 1017 aaPredicted RBP8.66□□□□□ -1.02
SFPQ-205ENST00000468598 COL14A1Q05707 1796 aaKnown RBP8.66□□□□□ -1.02
SFPQ-205ENST00000468598 UQCRHLA0A096LP55 91 aa8.66□□□□□ -1.02
SFPQ-205ENST00000468598 REC8O95072 547 aa8.66□□□□□ -1.02
SFPQ-205ENST00000468598 UQCRHP07919 91 aa8.66□□□□□ -1.02
SFPQ-205ENST00000468598 ZNF853P0CG23 659 aa8.66□□□□□ -1.02
SFPQ-205ENST00000468598 MCM2P49736 904 aa8.66□□□□□ -1.02
SFPQ-205ENST00000468598 SLIT2O94813 1529 aa8.66□□□□□ -1.02
SFPQ-205ENST00000468598 LMOD3Q0VAK6 560 aa8.65□□□□□ -1.02
SFPQ-205ENST00000468598 FAM98CQ17RN3 349 aaKnown RBP8.65□□□□□ -1.03
SFPQ-205ENST00000468598 RPAP2Q8IXW5 612 aaPredicted RBP8.65□□□□□ -1.03
SFPQ-205ENST00000468598 GPT2Q8TD30 523 aa8.65□□□□□ -1.03
SFPQ-205ENST00000468598 SYAP1Q96A49 352 aaPredicted RBP8.65□□□□□ -1.03
SFPQ-205ENST00000468598 CARD10Q9BWT7 1032 aa8.65□□□□□ -1.03
SFPQ-205ENST00000468598 KDRP35968 1356 aa8.65□□□□□ -1.03
SFPQ-205ENST00000468598 MEGF6O75095 1541 aa8.64□□□□□ -1.03
SFPQ-205ENST00000468598 PRPF40AO75400 957 aaKnown RBP8.64□□□□□ -1.03
SFPQ-205ENST00000468598 RAPGEF4Q8WZA2 1011 aa8.64□□□□□ -1.03
SFPQ-205ENST00000468598 ANKRD44Q8N8A2 993 aa8.64□□□□□ -1.03
SFPQ-205ENST00000468598 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
SFPQ-205ENST00000468598 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
SFPQ-205ENST00000468598 PRDM4Q9UKN5 801 aa8.64□□□□□ -1.03
SFPQ-205ENST00000468598 SPATA31A1Q5TZJ5 1347 aa8.64□□□□□ -1.03
SFPQ-205ENST00000468598 CRB1P82279 1406 aa8.64□□□□□ -1.03
SFPQ-205ENST00000468598 A0A0G2JS52 829 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 UVSSAQ2YD98 709 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 FAM182BQ5T319 152 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 MCM10Q7L590 875 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 QTRT2Q9H974 415 aaKnown RBP8.63□□□□□ -1.03
SFPQ-205ENST00000468598 KAT6BQ8WYB5 2073 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 FAM208AQ9UK61 1670 aaKnown RBP8.63□□□□□ -1.03
SFPQ-205ENST00000468598 SPATA31A5Q5VU36 1347 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 SPATA31A7Q8IWB4 1347 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 PHF14O94880 888 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 RBM10P98175 930 aaKnown RBP8.63□□□□□ -1.03
SFPQ-205ENST00000468598 FAM184AQ8NB25 1140 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 C1orf115Q9H7X2 142 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 RGS17Q9UGC6 210 aaPredicted RBP8.63□□□□□ -1.03
SFPQ-205ENST00000468598 ZDHHC9Q9Y397 364 aa8.63□□□□□ -1.03
SFPQ-205ENST00000468598 IL2RBP14784 551 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 INTS4Q96HW7 963 aaKnown RBP8.62□□□□□ -1.03
SFPQ-205ENST00000468598 PRIMPOLQ96LW4 560 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 NRAPQ86VF7 1730 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 ERC2O15083 957 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 TATP17735 454 aaPredicted RBP8.62□□□□□ -1.03
SFPQ-205ENST00000468598 HMGN5P82970 282 aaKnown RBP8.62□□□□□ -1.03
SFPQ-205ENST00000468598 KIAA2012Q0VF49 1180 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 TWISTNBQ3B726 338 aaPredicted RBP8.62□□□□□ -1.03
SFPQ-205ENST00000468598 ZNF530Q6P9A1 599 aaPredicted RBP8.62□□□□□ -1.03
SFPQ-205ENST00000468598 MPRIPQ6WCQ1 1025 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 LGR6Q9HBX8 967 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 TMEM63CQ9P1W3 806 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 CYP27B1O15528 508 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 VPS72Q15906 364 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 IL17RAQ96F46 866 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 TSPY26PQ9H489 355 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 OSBPL3Q9H4L5 887 aa8.62□□□□□ -1.03
SFPQ-205ENST00000468598 BRD1O95696 1058 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms