RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 HMGB2P26583 209 aaKnown RBP11.59□□□□□ -0.55
UFD1-205ENST00000459854 SF3B2Q13435 895 aaKnown RBP11.59□□□□□ -0.55
UFD1-205ENST00000459854 ZNF530Q6P9A1 599 aaPredicted RBP11.59□□□□□ -0.55
UFD1-205ENST00000459854 SYTL4Q96C24 671 aaPredicted RBP11.59□□□□□ -0.55
UFD1-205ENST00000459854 PCMTD1Q96MG8 357 aaPredicted RBP11.59□□□□□ -0.55
UFD1-205ENST00000459854 KIF24Q5T7B8 1368 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 AATKQ6ZMQ8 1374 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 PARD3Q8TEW0 1356 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 ADGRB2O60241 1585 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 CBFA2T2O43439 604 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 AEBP1Q8IUX7 1158 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 MCM3P25205 808 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 FILIP1LQ4L180 1135 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 AXDND1Q5T1B0 1012 aaPredicted RBP11.59□□□□□ -0.55
UFD1-205ENST00000459854 DDX54Q8TDD1 881 aaKnown RBP11.59□□□□□ -0.55
UFD1-205ENST00000459854 USP31Q70CQ4 1352 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 KIAA0232Q92628 1395 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 ARHGEF25Q86VW2 580 aa11.58□□□□□ -0.56
UFD1-205ENST00000459854 TTC5Q8N0Z6 440 aa11.58□□□□□ -0.56
UFD1-205ENST00000459854 ANO2Q9NQ90 1003 aa11.58□□□□□ -0.56
UFD1-205ENST00000459854 TRPC5Q9UL62 973 aaPredicted RBP11.58□□□□□ -0.56
UFD1-205ENST00000459854 RTL1A6NKG5 1358 aa11.58□□□□□ -0.56
UFD1-205ENST00000459854 RIPK4P57078 832 aa11.58□□□□□ -0.56
UFD1-205ENST00000459854 PRIMPOLQ96LW4 560 aa11.58□□□□□ -0.56
UFD1-205ENST00000459854 FBLN1P23142 703 aa11.58□□□□□ -0.56
UFD1-205ENST00000459854 ITSN1Q15811 1721 aa11.58□□□□□ -0.56
UFD1-205ENST00000459854 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
UFD1-205ENST00000459854 WDR33Q9C0J8 1336 aaKnown RBP11.57□□□□□ -0.56
UFD1-205ENST00000459854 KIF1AQ12756 1690 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 STK11IPQ8N1F8 1099 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 GTPBP4Q9BZE4 634 aaKnown RBP11.57□□□□□ -0.56
UFD1-205ENST00000459854 VPS37CA5D8V6 355 aaPredicted RBP11.57□□□□□ -0.56
UFD1-205ENST00000459854 ERC2O15083 957 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 ADAMTS8Q9UP79 889 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 KINO60870 393 aaKnown RBP11.57□□□□□ -0.56
UFD1-205ENST00000459854 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 APAF1O14727 1248 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 CPLX1O14810 134 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 IL2RBP14784 551 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
UFD1-205ENST00000459854 DACH1Q9UI36 760 aa11.57□□□□□ -0.56
UFD1-205ENST00000459854 SAFBQ15424 915 aaKnown RBP eCLIP11.56□□□□□ -0.56
UFD1-205ENST00000459854 MICALCLQ6ZW33 695 aa11.56□□□□□ -0.56
UFD1-205ENST00000459854 FILIP1Q7Z7B0 1213 aa11.56□□□□□ -0.56
UFD1-205ENST00000459854 LUC7LQ9NQ29 371 aaKnown RBP11.56□□□□□ -0.56
UFD1-205ENST00000459854 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
UFD1-205ENST00000459854 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
UFD1-205ENST00000459854 ZNF396Q96N95 335 aaPredicted RBP11.56□□□□□ -0.56
UFD1-205ENST00000459854 RRP7AQ9Y3A4 280 aaKnown RBP11.56□□□□□ -0.56
UFD1-205ENST00000459854 TCP11L2Q8N4U5 519 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 RNF214Q8ND24 703 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 STRCQ7RTU9 1775 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 SHTN1A0MZ66 631 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 K7ELQ4 463 aaPredicted RBP11.55□□□□□ -0.56
UFD1-205ENST00000459854 NEMFO60524 1076 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 PRPF40AO75400 957 aaKnown RBP11.55□□□□□ -0.56
UFD1-205ENST00000459854 CLCN1P35523 988 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 SLC4A10Q6U841 1118 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 DYDC1Q8WWB3 177 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 TIGD1Q96MW7 591 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 DDB1Q16531 1140 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 INSRP06213 1382 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 MARCH6O60337 910 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 SDF4Q9BRK5 362 aa11.55□□□□□ -0.56
UFD1-205ENST00000459854 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.55□□□□□ -0.56
UFD1-205ENST00000459854 POTEB2H3BUK9 544 aa11.54□□□□□ -0.56
UFD1-205ENST00000459854 UNC5CLQ8IV45 518 aa11.54□□□□□ -0.56
UFD1-205ENST00000459854 ZCRB1Q8TBF4 217 aaKnown RBP11.54□□□□□ -0.56
UFD1-205ENST00000459854 UBXN4Q92575 508 aa11.54□□□□□ -0.56
UFD1-205ENST00000459854 NPHP1O15259 732 aa11.54□□□□□ -0.56
UFD1-205ENST00000459854 POLR3GO15318 223 aaPredicted RBP11.54□□□□□ -0.56
UFD1-205ENST00000459854 CABP4P57796 275 aa11.53□□□□□ -0.56
UFD1-205ENST00000459854 IFNL2Q8IZJ0 200 aa11.53□□□□□ -0.56
UFD1-205ENST00000459854 HIP1O00291 1037 aa11.53□□□□□ -0.56
UFD1-205ENST00000459854 MAP9Q49MG5 647 aa11.53□□□□□ -0.56
UFD1-205ENST00000459854 TAF7LQ5H9L4 462 aa11.53□□□□□ -0.56
UFD1-205ENST00000459854 PNISRQ8TF01 805 aaKnown RBP11.53□□□□□ -0.56
UFD1-205ENST00000459854 QTRT2Q9H974 415 aaKnown RBP11.53□□□□□ -0.56
UFD1-205ENST00000459854 NEFHP12036 1026 aa11.53□□□□□ -0.56
UFD1-205ENST00000459854 PNPLA6Q8IY17 1366 aa11.53□□□□□ -0.56
UFD1-205ENST00000459854 GNAT3A8MTJ3 354 aa11.52□□□□□ -0.56
UFD1-205ENST00000459854 EYA1Q99502 592 aa11.52□□□□□ -0.56
UFD1-205ENST00000459854 USP19O94966 1318 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 FMN2Q9NZ56 1722 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 GNAI1P63096 354 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 NFE2L2Q16236 605 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 FOXD4L6Q3SYB3 417 aaPredicted RBP11.52□□□□□ -0.57
UFD1-205ENST00000459854 FOXD4L3Q6VB84 417 aaPredicted RBP11.52□□□□□ -0.57
UFD1-205ENST00000459854 JMYQ8N9B5 988 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 WDR17Q8IZU2 1322 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 BLMP54132 1417 aaPredicted RBP11.52□□□□□ -0.57
UFD1-205ENST00000459854 SMC2O95347 1197 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 AFF2P51816 1311 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 TRDNQ13061 729 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 CARD10Q9BWT7 1032 aa11.52□□□□□ -0.57
UFD1-205ENST00000459854 TTLL5Q6EMB2 1281 aa11.51□□□□□ -0.57
UFD1-205ENST00000459854 ANKRD18AQ8IVF6 992 aa11.51□□□□□ -0.57
UFD1-205ENST00000459854 PDILTQ8N807 584 aa11.51□□□□□ -0.57
UFD1-205ENST00000459854 RXRBP28702 533 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms