RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 ANKRD36BQ8N2N9 1353 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 RTEL1-TNFRSF6BF6WH68 1400 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 FYB1O15117 783 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 USP19O94966 1318 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 VPS53Q5VIR6 699 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 MIS18AQ9NYP9 233 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 TBC1D2BQ9UPU7 963 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 ZMYM3Q14202 1370 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 SPDYE4A6NLX3 237 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 CWC27Q6UX04 472 aaKnown RBP7.47□□□□□ -1.21
BDNF-211ENST00000439476 ZGPATQ8N5A5 531 aaKnown RBP7.47□□□□□ -1.21
BDNF-211ENST00000439476 F6X3S4 739 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 CBFA2T2O43439 604 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 RAD21O60216 631 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 ADCY5O95622 1261 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 FBLN1P23142 703 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 KRT32Q14532 448 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 TXNDC2Q86VQ3 553 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 NUP62CLQ9H1M0 184 aa7.47□□□□□ -1.21
BDNF-211ENST00000439476 VAMP4O75379 141 aa7.46□□□□□ -1.21
BDNF-211ENST00000439476 SLC3A2P08195 630 aaKnown RBP7.46□□□□□ -1.21
BDNF-211ENST00000439476 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.21
BDNF-211ENST00000439476 HDGFL1Q5TGJ6 251 aa7.46□□□□□ -1.21
BDNF-211ENST00000439476 VPS37DQ86XT2 251 aa7.46□□□□□ -1.21
BDNF-211ENST00000439476 NUTM1Q86Y26 1132 aa7.46□□□□□ -1.21
BDNF-211ENST00000439476 JAKMIP1Q96N16 626 aaKnown RBP7.46□□□□□ -1.21
BDNF-211ENST00000439476 FSD1Q9BTV5 496 aa7.46□□□□□ -1.21
BDNF-211ENST00000439476 RBSNQ9H1K0 784 aa7.46□□□□□ -1.21
BDNF-211ENST00000439476 FAM83GA6ND36 823 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 ZBTB7BO15156 539 aaPredicted RBP7.46□□□□□ -1.22
BDNF-211ENST00000439476 CCDC172P0C7W6 258 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 GAS2L3Q86XJ1 694 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 ANKRD44Q8N8A2 993 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 PDRG1Q9NUG6 133 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 PSME1Q06323 249 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 PLEKHO1Q53GL0 409 aaPredicted RBP7.46□□□□□ -1.22
BDNF-211ENST00000439476 RRP12Q5JTH9 1297 aaKnown RBP7.46□□□□□ -1.22
BDNF-211ENST00000439476 NBPF6Q5VWK0 638 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 RIC3Q7Z5B4 369 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 NBPF5PQ86XG9 351 aaPredicted RBP7.46□□□□□ -1.22
BDNF-211ENST00000439476 NME9Q86XW9 330 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 PLEKHM2Q8IWE5 1019 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 TSPYL6Q8N831 410 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 CCDC191Q8NCU4 936 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 CCDC97Q96F63 343 aaPredicted RBP7.46□□□□□ -1.22
BDNF-211ENST00000439476 NBPF4Q96M43 638 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 SRGAP3O43295 1099 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 ERLIN1O75477 346 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 HCLS1P14317 486 aaPredicted RBP7.46□□□□□ -1.22
BDNF-211ENST00000439476 EVA1CP58658 441 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 MAP3K11Q16584 847 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 CT47A1Q5JQC4 288 aaPredicted RBP7.46□□□□□ -1.22
BDNF-211ENST00000439476 TSHZ3Q63HK5 1081 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 DCTPP1Q9H773 170 aa7.46□□□□□ -1.22
BDNF-211ENST00000439476 CASTP20810 708 aaKnown RBP7.45□□□□□ -1.22
BDNF-211ENST00000439476 UVSSAQ2YD98 709 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 WAPLQ7Z5K2 1190 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 FERMT3Q86UX7 667 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 CCDC83Q8IWF9 413 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 C8orf58Q8NAV2 365 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 PRIMPOLQ96LW4 560 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 USP26Q9BXU7 913 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 NOL7Q9UMY1 257 aaKnown RBP7.45□□□□□ -1.22
BDNF-211ENST00000439476 EIF3JO75822 258 aaKnown RBP7.45□□□□□ -1.22
BDNF-211ENST00000439476 CEBPZQ03701 1054 aaKnown RBP7.45□□□□□ -1.22
BDNF-211ENST00000439476 CFAP45Q9UL16 551 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 PLCH2O75038 1416 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 ERICH4A6NGS2 130 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 ZNF445P59923 1031 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 STK3Q13188 491 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 BIRC2Q13490 618 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 IQCEQ6IPM2 695 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 ZSCAN25Q6NSZ9 544 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 SPATA32Q96LK8 384 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 MEIS3Q99687 375 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 CTDP1Q9Y5B0 961 aaPredicted RBP7.45□□□□□ -1.22
BDNF-211ENST00000439476 PTPRCP08575 1304 aa7.45□□□□□ -1.22
BDNF-211ENST00000439476 CDKL5O76039 1030 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 NOLC1Q14978 699 aaKnown RBP eCLIP7.44□□□□□ -1.22
BDNF-211ENST00000439476 CAMK4Q16566 473 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 LARP6Q9BRS8 491 aaKnown RBP7.44□□□□□ -1.22
BDNF-211ENST00000439476 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.44□□□□□ -1.22
BDNF-211ENST00000439476 ZNHIT6Q9NWK9 470 aaKnown RBP7.44□□□□□ -1.22
BDNF-211ENST00000439476 TRIM35Q9UPQ4 493 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 ABCC2Q92887 1545 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 TRAPPC8Q9Y2L5 1435 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 PDE1AP54750 535 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 NLRP6P59044 892 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 IDI1Q13907 227 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 LEKR1Q6ZMV7 388 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 CCDC43Q96MW1 224 aaKnown RBP7.44□□□□□ -1.22
BDNF-211ENST00000439476 LIMCH1Q9UPQ0 1083 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 CCDC61Q9Y6R9 512 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 ERLIN2O94905 339 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 RAPGEF3O95398 923 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 USP8P40818 1118 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 SLC20A2Q08357 652 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 STIM1Q13586 685 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 CYB5RLQ6IPT4 315 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 BLOC1S2Q6QNY1 142 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms