RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 INTS5Q6P9B9 1019 aaKnown RBP11.98□□□□□ -0.49
SCRN1-208ENST00000438497 C2CD5Q86YS7 1000 aa11.98□□□□□ -0.49
SCRN1-208ENST00000438497 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
SCRN1-208ENST00000438497 POLKQ9UBT6 870 aa11.98□□□□□ -0.49
SCRN1-208ENST00000438497 NFKBIEO00221 500 aa11.97□□□□□ -0.49
SCRN1-208ENST00000438497 LBX1P52954 281 aa11.97□□□□□ -0.49
SCRN1-208ENST00000438497 EIF4A2Q14240 407 aaKnown RBP11.97□□□□□ -0.49
SCRN1-208ENST00000438497 NFIXQ14938 502 aa11.97□□□□□ -0.49
SCRN1-208ENST00000438497 ERFEQ4G0M1 354 aa11.97□□□□□ -0.49
SCRN1-208ENST00000438497 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
SCRN1-208ENST00000438497 ZNF530Q6P9A1 599 aaPredicted RBP11.97□□□□□ -0.49
SCRN1-208ENST00000438497 KIF20BQ96Q89 1820 aa11.97□□□□□ -0.49
SCRN1-208ENST00000438497 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
SCRN1-208ENST00000438497 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
SCRN1-208ENST00000438497 VEGFBP49765 207 aa11.96□□□□□ -0.49
SCRN1-208ENST00000438497 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
SCRN1-208ENST00000438497 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
SCRN1-208ENST00000438497 ZNF622Q969S3 477 aaKnown RBP eCLIP11.96□□□□□ -0.49
SCRN1-208ENST00000438497 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
SCRN1-208ENST00000438497 CNTNAP1P78357 1384 aa11.95□□□□□ -0.5
SCRN1-208ENST00000438497 C21orf2O43822 256 aa11.95□□□□□ -0.5
SCRN1-208ENST00000438497 DDNO94850 711 aaPredicted RBP11.95□□□□□ -0.5
SCRN1-208ENST00000438497 ABHD8Q96I13 439 aa11.95□□□□□ -0.5
SCRN1-208ENST00000438497 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
SCRN1-208ENST00000438497 NARFQ9UHQ1 456 aa11.95□□□□□ -0.5
SCRN1-208ENST00000438497 TMEM88BA6NKF7 163 aa11.94□□□□□ -0.5
SCRN1-208ENST00000438497 TNNT2P45379 298 aaPredicted RBP11.94□□□□□ -0.5
SCRN1-208ENST00000438497 C1orf141Q5JVX7 400 aa11.94□□□□□ -0.5
SCRN1-208ENST00000438497 DNAJC10Q8IXB1 793 aa11.94□□□□□ -0.5
SCRN1-208ENST00000438497 AFDNP55196 1824 aaKnown RBP11.94□□□□□ -0.5
SCRN1-208ENST00000438497 MLLT1Q03111 559 aaPredicted RBP11.93□□□□□ -0.5
SCRN1-208ENST00000438497 DEFB115Q30KQ5 88 aa11.93□□□□□ -0.5
SCRN1-208ENST00000438497 PASKQ96RG2 1323 aa11.92□□□□□ -0.5
SCRN1-208ENST00000438497 TIAM2Q8IVF5 1701 aa11.92□□□□□ -0.5
SCRN1-208ENST00000438497 CCDC85CA6NKD9 419 aa11.92□□□□□ -0.5
SCRN1-208ENST00000438497 BICDL1Q6ZP65 573 aa11.92□□□□□ -0.5
SCRN1-208ENST00000438497 PDZRN3Q9UPQ7 1066 aa11.92□□□□□ -0.5
SCRN1-208ENST00000438497 CLEC11AQ9Y240 323 aa11.92□□□□□ -0.5
SCRN1-208ENST00000438497 DICER1Q9UPY3 1922 aaKnown RBP11.92□□□□□ -0.5
SCRN1-208ENST00000438497 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
SCRN1-208ENST00000438497 IQCA1LA6NCM1 817 aa11.91□□□□□ -0.5
SCRN1-208ENST00000438497 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
SCRN1-208ENST00000438497 CYP19A1P11511 503 aaPredicted RBP11.91□□□□□ -0.5
SCRN1-208ENST00000438497 PDE6BP35913 854 aa11.91□□□□□ -0.5
SCRN1-208ENST00000438497 LDHDQ86WU2 507 aa11.91□□□□□ -0.5
SCRN1-208ENST00000438497 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
SCRN1-208ENST00000438497 HSPA8P11142 646 aaKnown RBP11.9□□□□□ -0.5
SCRN1-208ENST00000438497 MAP2K1Q02750 393 aaPredicted RBP11.9□□□□□ -0.5
SCRN1-208ENST00000438497 BRIP1Q9BX63 1249 aa11.9□□□□□ -0.5
SCRN1-208ENST00000438497 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.5
SCRN1-208ENST00000438497 RGS19P49795 217 aa11.89□□□□□ -0.51
SCRN1-208ENST00000438497 EAPPQ56P03 285 aaPredicted RBP11.89□□□□□ -0.51
SCRN1-208ENST00000438497 TAOK3Q9H2K8 898 aa11.89□□□□□ -0.51
SCRN1-208ENST00000438497 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
SCRN1-208ENST00000438497 TJP1Q07157 1748 aa11.89□□□□□ -0.51
SCRN1-208ENST00000438497 ANKRD26Q9UPS8 1709 aa11.89□□□□□ -0.51
SCRN1-208ENST00000438497 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
SCRN1-208ENST00000438497 ADAMTS7Q9UKP4 1686 aa11.88□□□□□ -0.51
SCRN1-208ENST00000438497 CANXP27824 592 aaKnown RBP11.88□□□□□ -0.51
SCRN1-208ENST00000438497 SLC39A6Q13433 755 aa11.88□□□□□ -0.51
SCRN1-208ENST00000438497 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
SCRN1-208ENST00000438497 ZBTB1Q9Y2K1 713 aa11.88□□□□□ -0.51
SCRN1-208ENST00000438497 COL15A1P39059 1388 aa11.88□□□□□ -0.51
SCRN1-208ENST00000438497 NRXN2Q9P2S2 1712 aa11.88□□□□□ -0.51
SCRN1-208ENST00000438497 WDR33Q9C0J8 1336 aaKnown RBP11.87□□□□□ -0.51
SCRN1-208ENST00000438497 LTBP3Q9NS15 1303 aa11.87□□□□□ -0.51
SCRN1-208ENST00000438497 FER1L6Q2WGJ9 1857 aa11.87□□□□□ -0.51
SCRN1-208ENST00000438497 AEBP1Q8IUX7 1158 aa11.87□□□□□ -0.51
SCRN1-208ENST00000438497 CNKSR1Q969H4 720 aa11.87□□□□□ -0.51
SCRN1-208ENST00000438497 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
SCRN1-208ENST00000438497 LGR6Q9HBX8 967 aa11.87□□□□□ -0.51
SCRN1-208ENST00000438497 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
SCRN1-208ENST00000438497 A0A087WZG4 1122 aa11.86□□□□□ -0.51
SCRN1-208ENST00000438497 RASSF10A6NK89 507 aa11.86□□□□□ -0.51
SCRN1-208ENST00000438497 SOGA3Q5TF21 947 aa11.86□□□□□ -0.51
SCRN1-208ENST00000438497 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
SCRN1-208ENST00000438497 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
SCRN1-208ENST00000438497 PPP4R3CPQ6ZMV5 832 aa11.86□□□□□ -0.51
SCRN1-208ENST00000438497 CNTROBQ8N137 903 aa11.86□□□□□ -0.51
SCRN1-208ENST00000438497 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
SCRN1-208ENST00000438497 BEGAINQ9BUH8 593 aa11.86□□□□□ -0.51
SCRN1-208ENST00000438497 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
SCRN1-208ENST00000438497 NPHP1O15259 732 aa11.85□□□□□ -0.51
SCRN1-208ENST00000438497 AKAP4Q5JQC9 854 aa11.85□□□□□ -0.51
SCRN1-208ENST00000438497 PRR5LQ6MZQ0 368 aa11.85□□□□□ -0.51
SCRN1-208ENST00000438497 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
SCRN1-208ENST00000438497 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
SCRN1-208ENST00000438497 ABT1Q9ULW3 272 aaKnown RBP11.85□□□□□ -0.51
SCRN1-208ENST00000438497 SCN4AP35499 1836 aa11.85□□□□□ -0.51
SCRN1-208ENST00000438497 STARD3NLO95772 234 aa11.84□□□□□ -0.51
SCRN1-208ENST00000438497 EPHX2P34913 555 aa11.84□□□□□ -0.51
SCRN1-208ENST00000438497 EIF5P55010 431 aaKnown RBP11.84□□□□□ -0.51
SCRN1-208ENST00000438497 MAP1SQ66K74 1059 aaPredicted RBP11.84□□□□□ -0.51
SCRN1-208ENST00000438497 STYK1Q6J9G0 422 aa11.84□□□□□ -0.51
SCRN1-208ENST00000438497 PNMA8AQ86V59 439 aaPredicted RBP11.84□□□□□ -0.51
SCRN1-208ENST00000438497 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
SCRN1-208ENST00000438497 SRGNP10124 158 aa11.83□□□□□ -0.52
SCRN1-208ENST00000438497 PRPF40BQ6NWY9 871 aaKnown RBP11.83□□□□□ -0.52
SCRN1-208ENST00000438497 MASTLQ96GX5 879 aa11.83□□□□□ -0.52
SCRN1-208ENST00000438497 SETDB2Q96T68 719 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms