RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 SYCE3A1L190 88 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 CEP131Q9UPN4 1083 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 GOLIM4O00461 696 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 MX1P20591 662 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 CTCFLQ8NI51 663 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-206ENST00000438092 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 ERICH3Q5RHP9 1530 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 KRT32Q14532 448 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 CCDC112Q8NEF3 446 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 USP8P40818 1118 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 TAF4BQ92750 862 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 CACNA2D4Q7Z3S7 1137 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 DRC1Q96MC2 740 aa12.05□□□□□ -0.48
SHPRH-206ENST00000438092 ATAD2Q6PL18 1390 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 POTEJP0CG39 1038 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 PUF60Q9UHX1 559 aaKnown RBP12.04□□□□□ -0.48
SHPRH-206ENST00000438092 NAIPQ13075 1403 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 PPP1R12BO60237 982 aaPredicted RBP12.04□□□□□ -0.48
SHPRH-206ENST00000438092 CCDC178Q5BJE1 867 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 ZNF397Q8NF99 534 aaPredicted RBP12.04□□□□□ -0.48
SHPRH-206ENST00000438092 C8orf37Q96NL8 207 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 JAKMIP3Q5VZ66 844 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 CCDC102AQ96A19 550 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 C8orf76Q96K31 380 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 SUPT6HQ7KZ85 1726 aaKnown RBP12.04□□□□□ -0.48
SHPRH-206ENST00000438092 ARHGEF11O15085 1522 aa12.04□□□□□ -0.48
SHPRH-206ENST00000438092 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
SHPRH-206ENST00000438092 CWC15Q9P013 229 aaKnown RBP12.04□□□□□ -0.48
SHPRH-206ENST00000438092 GOLGA8BA8MQT2 603 aa12.03□□□□□ -0.48
SHPRH-206ENST00000438092 SSRP1Q08945 709 aaKnown RBP12.03□□□□□ -0.48
SHPRH-206ENST00000438092 DDX46Q7L014 1031 aaKnown RBP12.03□□□□□ -0.48
SHPRH-206ENST00000438092 FAM83GA6ND36 823 aa12.03□□□□□ -0.48
SHPRH-206ENST00000438092 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
SHPRH-206ENST00000438092 GOLGA8AA7E2F4 631 aa12.03□□□□□ -0.48
SHPRH-206ENST00000438092 ZSCAN31Q96LW9 406 aaPredicted RBP12.03□□□□□ -0.48
SHPRH-206ENST00000438092 TSG101Q99816 390 aa12.03□□□□□ -0.48
SHPRH-206ENST00000438092 ARAP1Q96P48 1450 aa12.02□□□□□ -0.48
SHPRH-206ENST00000438092 HFM1A2PYH4 1435 aa12.02□□□□□ -0.48
SHPRH-206ENST00000438092 ARHGAP29Q52LW3 1261 aa12.02□□□□□ -0.48
SHPRH-206ENST00000438092 LDHAL6AQ6ZMR3 332 aa12.02□□□□□ -0.48
SHPRH-206ENST00000438092 BCCIPQ9P287 314 aaKnown RBP eCLIP12.02□□□□□ -0.48
SHPRH-206ENST00000438092 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.48
SHPRH-206ENST00000438092 BIN1O00499 593 aa12.02□□□□□ -0.48
SHPRH-206ENST00000438092 SSH1Q8WYL5 1049 aa12.02□□□□□ -0.49
SHPRH-206ENST00000438092 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.49
SHPRH-206ENST00000438092 HECW1Q76N89 1606 aa12.02□□□□□ -0.49
SHPRH-206ENST00000438092 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
SHPRH-206ENST00000438092 GLRX3O76003 335 aaKnown RBP12.02□□□□□ -0.49
SHPRH-206ENST00000438092 PICALMQ13492 652 aa12.02□□□□□ -0.49
SHPRH-206ENST00000438092 TCERG1LQ5VWI1 586 aa12.02□□□□□ -0.49
SHPRH-206ENST00000438092 RAB11FIP3O75154 756 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 DNAAF4Q8WXU2 420 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 GRPEL1Q9HAV7 217 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 KIAA0754O94854 1291 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 MAP3K11Q16584 847 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 UBE3BQ7Z3V4 1068 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 CATIPQ7Z7H3 387 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 ERICH4A6NGS2 130 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 SMTNL1A8MU46 457 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-206ENST00000438092 CCDC194A0A1B0GVG4 234 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 EZRP15311 586 aaKnown RBP12.01□□□□□ -0.49
SHPRH-206ENST00000438092 TDRD12Q587J7 1177 aaKnown RBP12.01□□□□□ -0.49
SHPRH-206ENST00000438092 CKAP2LQ8IYA6 745 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 COMMD10Q9Y6G5 202 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 CCDC150Q8NCX0 1101 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 GDPD2Q9HCC8 539 aa12.01□□□□□ -0.49
SHPRH-206ENST00000438092 PLS1Q14651 629 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 SPA17Q15506 151 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 NBPF6Q5VWK0 638 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 MICU3Q86XE3 530 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
SHPRH-206ENST00000438092 NBPF4Q96M43 638 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 PODXL2Q9NZ53 605 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 TFIP11Q9UBB9 837 aaKnown RBP12□□□□□ -0.49
SHPRH-206ENST00000438092 SYCP3Q8IZU3 236 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 TXLNBQ8N3L3 684 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 FERMT2Q96AC1 680 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 UBAP1LF5GYI3 381 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
SHPRH-206ENST00000438092 JAG2Q9Y219 1238 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 TMEM266Q2M3C6 531 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 AMOTQ4VCS5 1084 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 TMEM67Q5HYA8 995 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 IDEP14735 1019 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 ST5P78524 1137 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 FKBP15Q5T1M5 1219 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 IL27Q8NEV9 243 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 DAPK1P53355 1430 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 GSTTP1A0A1W2PQM5 241 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 DYDC1Q8WWB3 177 aa12□□□□□ -0.49
SHPRH-206ENST00000438092 UQCRHLA0A096LP55 91 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 UQCRHP07919 91 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 NUP88Q99567 741 aaPredicted RBP11.99□□□□□ -0.49
SHPRH-206ENST00000438092 PLEKHH2Q8IVE3 1493 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 CD109Q6YHK3 1445 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms