RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 IGSF1Q8N6C5 1336 aa11.86□□□□□ -0.51
R3HDM1-208ENST00000438014 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
R3HDM1-208ENST00000438014 JMYQ8N9B5 988 aa11.86□□□□□ -0.51
R3HDM1-208ENST00000438014 SLC39A7Q92504 469 aa11.86□□□□□ -0.51
R3HDM1-208ENST00000438014 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
R3HDM1-208ENST00000438014 USP47Q96K76 1375 aa11.85□□□□□ -0.51
R3HDM1-208ENST00000438014 NFAT5O94916 1531 aa11.85□□□□□ -0.51
R3HDM1-208ENST00000438014 RGPD5Q99666 1765 aa11.84□□□□□ -0.51
R3HDM1-208ENST00000438014 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
R3HDM1-208ENST00000438014 KTN1Q86UP2 1357 aaKnown RBP11.84□□□□□ -0.51
R3HDM1-208ENST00000438014 RAB3GAP2Q9H2M9 1393 aa11.84□□□□□ -0.51
R3HDM1-208ENST00000438014 C16orf71Q8IYS4 520 aaPredicted RBP11.84□□□□□ -0.51
R3HDM1-208ENST00000438014 ZCRB1Q8TBF4 217 aaKnown RBP11.84□□□□□ -0.51
R3HDM1-208ENST00000438014 RBM46Q8TBY0 533 aaKnown RBP11.84□□□□□ -0.51
R3HDM1-208ENST00000438014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.83□□□□□ -0.525e-7■■■■□ 20.1
R3HDM1-208ENST00000438014 WWC3Q9ULE0 1092 aa11.83□□□□□ -0.52
R3HDM1-208ENST00000438014 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
R3HDM1-208ENST00000438014 FSTL1Q12841 308 aa11.82□□□□□ -0.52
R3HDM1-208ENST00000438014 AMHR2Q16671 573 aa11.82□□□□□ -0.52
R3HDM1-208ENST00000438014 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
R3HDM1-208ENST00000438014 PTCD2Q8WV60 388 aaKnown RBP11.82□□□□□ -0.52
R3HDM1-208ENST00000438014 IP6K1Q92551 441 aa11.82□□□□□ -0.52
R3HDM1-208ENST00000438014 GOLGB1Q14789 3259 aaKnown RBP11.81□□□□□ -0.52
R3HDM1-208ENST00000438014 KIAA1210Q9ULL0 1709 aa11.81□□□□□ -0.52
R3HDM1-208ENST00000438014 C7P10643 843 aa11.81□□□□□ -0.52
R3HDM1-208ENST00000438014 NSD2O96028 1365 aa11.8□□□□□ -0.52
R3HDM1-208ENST00000438014 FECHP22830 423 aa11.8□□□□□ -0.52
R3HDM1-208ENST00000438014 NME9Q86XW9 330 aa11.8□□□□□ -0.52
R3HDM1-208ENST00000438014 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
R3HDM1-208ENST00000438014 FAM117AQ9C073 453 aa11.8□□□□□ -0.52
R3HDM1-208ENST00000438014 NMRK2Q9NPI5 230 aa11.8□□□□□ -0.52
R3HDM1-208ENST00000438014 PTGDRQ13258 359 aa11.79□□□□□ -0.52
R3HDM1-208ENST00000438014 DDRGK1Q96HY6 314 aa11.79□□□□□ -0.52
R3HDM1-208ENST00000438014 POTEFA5A3E0 1075 aa11.78□□□□□ -0.52
R3HDM1-208ENST00000438014 TGFB2P61812 414 aa11.78□□□□□ -0.52
R3HDM1-208ENST00000438014 ARHGAP27Q6ZUM4 889 aa11.78□□□□□ -0.52
R3HDM1-208ENST00000438014 HDGFL2Q7Z4V5 671 aaPredicted RBP11.78□□□□□ -0.52
R3HDM1-208ENST00000438014 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
R3HDM1-208ENST00000438014 TUBGCP6Q96RT7 1819 aa11.78□□□□□ -0.52
R3HDM1-208ENST00000438014 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.52
R3HDM1-208ENST00000438014 HTRA3P83110 453 aa11.77□□□□□ -0.53
R3HDM1-208ENST00000438014 PARP9Q8IXQ6 854 aa11.77□□□□□ -0.53
R3HDM1-208ENST00000438014 BCS1LQ9Y276 419 aa11.77□□□□□ -0.53
R3HDM1-208ENST00000438014 CGNL1Q0VF96 1302 aa11.77□□□□□ -0.53
R3HDM1-208ENST00000438014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.76□□□□□ -0.53
R3HDM1-208ENST00000438014 PHF14O94880 888 aa11.76□□□□□ -0.53
R3HDM1-208ENST00000438014 SSFA2P28290 1259 aa11.76□□□□□ -0.53
R3HDM1-208ENST00000438014 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
R3HDM1-208ENST00000438014 LY75O60449 1722 aa11.76□□□□□ -0.53
R3HDM1-208ENST00000438014 AMPHP49418 695 aa11.75□□□□□ -0.53
R3HDM1-208ENST00000438014 KDM2BQ8NHM5 1336 aa11.75□□□□□ -0.53
R3HDM1-208ENST00000438014 PALLDQ8WX93 1383 aa11.75□□□□□ -0.53
R3HDM1-208ENST00000438014 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
R3HDM1-208ENST00000438014 C9orf131Q5VYM1 1079 aa11.74□□□□□ -0.53
R3HDM1-208ENST00000438014 MPRIPQ6WCQ1 1025 aa11.74□□□□□ -0.53
R3HDM1-208ENST00000438014 TMC1Q8TDI8 760 aa11.74□□□□□ -0.53
R3HDM1-208ENST00000438014 RAPGEF4Q8WZA2 1011 aa11.74□□□□□ -0.53
R3HDM1-208ENST00000438014 TATP17735 454 aaPredicted RBP11.73□□□□□ -0.53
R3HDM1-208ENST00000438014 SMC1BQ8NDV3 1235 aa11.73□□□□□ -0.53
R3HDM1-208ENST00000438014 EPAS1Q99814 870 aa11.73□□□□□ -0.53
R3HDM1-208ENST00000438014 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
R3HDM1-208ENST00000438014 SBNO2Q9Y2G9 1366 aa11.73□□□□□ -0.53
R3HDM1-208ENST00000438014 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
R3HDM1-208ENST00000438014 PLEKHG2Q9H7P9 1386 aa11.72□□□□□ -0.53
R3HDM1-208ENST00000438014 A0A0G2JLW4 131 aa11.72□□□□□ -0.53
R3HDM1-208ENST00000438014 MMP10P09238 476 aa11.72□□□□□ -0.53
R3HDM1-208ENST00000438014 HSPA1AP0DMV8 641 aaKnown RBP11.72□□□□□ -0.53
R3HDM1-208ENST00000438014 HSPA1BP0DMV9 641 aaKnown RBP11.72□□□□□ -0.53
R3HDM1-208ENST00000438014 HOXC9P31274 260 aa11.72□□□□□ -0.53
R3HDM1-208ENST00000438014 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
R3HDM1-208ENST00000438014 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.53
R3HDM1-208ENST00000438014 NLGN1Q8N2Q7 840 aa11.71□□□□□ -0.53
R3HDM1-208ENST00000438014 EDC4Q6P2E9 1401 aaKnown RBP11.7□□□□□ -0.54
R3HDM1-208ENST00000438014 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
R3HDM1-208ENST00000438014 PCDH11XQ9BZA7 1347 aa11.7□□□□□ -0.54
R3HDM1-208ENST00000438014 PCDH11YQ9BZA8 1340 aa11.7□□□□□ -0.54
R3HDM1-208ENST00000438014 DOT1LQ8TEK3 1739 aa11.7□□□□□ -0.54
R3HDM1-208ENST00000438014 AMIGO3Q86WK7 504 aa11.7□□□□□ -0.54
R3HDM1-208ENST00000438014 COG3Q96JB2 828 aa11.7□□□□□ -0.54
R3HDM1-208ENST00000438014 SLC12A5Q9H2X9 1139 aa11.7□□□□□ -0.54
R3HDM1-208ENST00000438014 CCDC87Q9NVE4 849 aa11.7□□□□□ -0.54
R3HDM1-208ENST00000438014 MAP3K7O43318 606 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 DPEP1P16444 411 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 TMF1P82094 1093 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 NBPF6Q5VWK0 638 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 MEGF6O75095 1541 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 LTN1O94822 1766 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
R3HDM1-208ENST00000438014 LOC102724428A0A0B4J2F2 783 aa11.68□□□□□ -0.54
R3HDM1-208ENST00000438014 SIK1P57059 783 aa11.68□□□□□ -0.54
R3HDM1-208ENST00000438014 TRAPPC3LQ5T215 181 aa11.68□□□□□ -0.54
R3HDM1-208ENST00000438014 HOMEZQ8IX15 550 aa11.68□□□□□ -0.54
R3HDM1-208ENST00000438014 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
R3HDM1-208ENST00000438014 C5P01031 1676 aa11.68□□□□□ -0.54
R3HDM1-208ENST00000438014 USP54Q70EL1 1684 aa11.68□□□□□ -0.54
R3HDM1-208ENST00000438014 C10orf71Q711Q0 1435 aa11.68□□□□□ -0.54
R3HDM1-208ENST00000438014 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms