RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 FGFR1OPO95684 399 aaKnown RBP18.53■□□□□ 0.56
PTPN13-204ENST00000436978 JAKMIP3Q5VZ66 844 aa18.52■□□□□ 0.56
PTPN13-204ENST00000436978 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.56
PTPN13-204ENST00000436978 TSG101Q99816 390 aa18.52■□□□□ 0.56
PTPN13-204ENST00000436978 CTCFLQ8NI51 663 aaPredicted RBP18.52■□□□□ 0.56
PTPN13-204ENST00000436978 TRMT112Q9UI30 125 aaKnown RBP18.52■□□□□ 0.56
PTPN13-204ENST00000436978 CDC5LQ99459 802 aaKnown RBP18.52■□□□□ 0.55
PTPN13-204ENST00000436978 GBP2P32456 591 aaPredicted RBP18.52■□□□□ 0.55
PTPN13-204ENST00000436978 EXOC6BQ9Y2D4 811 aa18.52■□□□□ 0.55
PTPN13-204ENST00000436978 ERLIN1O75477 346 aa18.51■□□□□ 0.55
PTPN13-204ENST00000436978 NME9Q86XW9 330 aa18.51■□□□□ 0.55
PTPN13-204ENST00000436978 SEPT11Q9NVA2 429 aaKnown RBP18.51■□□□□ 0.55
PTPN13-204ENST00000436978 TMEM266Q2M3C6 531 aa18.51■□□□□ 0.55
PTPN13-204ENST00000436978 CADPS2Q86UW7 1296 aa18.51■□□□□ 0.55
PTPN13-204ENST00000436978 CCDC85AQ96PX6 553 aaPredicted RBP18.51■□□□□ 0.55
PTPN13-204ENST00000436978 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
PTPN13-204ENST00000436978 TTC21AQ8NDW8 1320 aa18.51■□□□□ 0.55
PTPN13-204ENST00000436978 WDR7Q9Y4E6 1490 aa18.51■□□□□ 0.55
PTPN13-204ENST00000436978 ZNF444Q8N0Y2 327 aaPredicted RBP18.5■□□□□ 0.55
PTPN13-204ENST00000436978 NUP160Q12769 1436 aa18.5■□□□□ 0.55
PTPN13-204ENST00000436978 MAP3K11Q16584 847 aa18.5■□□□□ 0.55
PTPN13-204ENST00000436978 GPATCH8Q9UKJ3 1502 aaKnown RBP18.5■□□□□ 0.55
PTPN13-204ENST00000436978 MINDY4BA8MYZ0 360 aa18.5■□□□□ 0.55
PTPN13-204ENST00000436978 LEKR1Q6ZMV7 388 aa18.5■□□□□ 0.55
PTPN13-204ENST00000436978 SLC12A7Q9Y666 1083 aa18.5■□□□□ 0.55
PTPN13-204ENST00000436978 NEFHP12036 1026 aa18.5■□□□□ 0.55
PTPN13-204ENST00000436978 SPTY2D1Q68D10 685 aaPredicted RBP18.5■□□□□ 0.55
PTPN13-204ENST00000436978 CWC25Q9NXE8 425 aaPredicted RBP18.5■□□□□ 0.55
PTPN13-204ENST00000436978 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
PTPN13-204ENST00000436978 CCDC150Q8NCX0 1101 aa18.5■□□□□ 0.55
PTPN13-204ENST00000436978 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
PTPN13-204ENST00000436978 KRT28Q7Z3Y7 464 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 EIF3JO75822 258 aaKnown RBP18.49■□□□□ 0.55
PTPN13-204ENST00000436978 CATIPQ7Z7H3 387 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 CCDC12Q8WUD4 166 aaPredicted RBP18.49■□□□□ 0.55
PTPN13-204ENST00000436978 MYO5CQ9NQX4 1742 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 A2MP01023 1474 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 AXDND1Q5T1B0 1012 aaPredicted RBP18.49■□□□□ 0.55
PTPN13-204ENST00000436978 EVI5LQ96CN4 794 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 H0YHG0 523 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 ZNF213O14771 459 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 ST5P78524 1137 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 IL16Q14005 1332 aa18.49■□□□□ 0.55
PTPN13-204ENST00000436978 IFNL2Q8IZJ0 200 aa18.48■□□□□ 0.55
PTPN13-204ENST00000436978 KIAA1328Q86T90 577 aa18.48■□□□□ 0.55
PTPN13-204ENST00000436978 SSRP1Q08945 709 aaKnown RBP18.48■□□□□ 0.55
PTPN13-204ENST00000436978 UHRF1BP1LA0JNW5 1464 aa18.48■□□□□ 0.55
PTPN13-204ENST00000436978 EIF5P55010 431 aaKnown RBP18.48■□□□□ 0.55
PTPN13-204ENST00000436978 ADAMTS2O95450 1211 aa18.48■□□□□ 0.55
PTPN13-204ENST00000436978 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
PTPN13-204ENST00000436978 SSH1Q8WYL5 1049 aa18.47■□□□□ 0.55
PTPN13-204ENST00000436978 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
PTPN13-204ENST00000436978 ZNF608Q9ULD9 1512 aaPredicted RBP18.47■□□□□ 0.55
PTPN13-204ENST00000436978 LRRFIP2Q9Y608 721 aaKnown RBP18.47■□□□□ 0.55
PTPN13-204ENST00000436978 CETN2P41208 172 aa18.47■□□□□ 0.55
PTPN13-204ENST00000436978 SCAND2PQ9GZW5 306 aaPredicted RBP18.47■□□□□ 0.55
PTPN13-204ENST00000436978 BOLA2Q9H3K6 86 aa18.47■□□□□ 0.55
PTPN13-204ENST00000436978 NEBLO76041 1014 aa18.47■□□□□ 0.55
PTPN13-204ENST00000436978 C14orf93Q9H972 538 aaKnown RBP18.47■□□□□ 0.55
PTPN13-204ENST00000436978 ADGRF5Q8IZF2 1346 aa18.47■□□□□ 0.55
PTPN13-204ENST00000436978 ASXL2Q76L83 1435 aa18.46■□□□□ 0.55
PTPN13-204ENST00000436978 BAG3O95817 575 aa18.46■□□□□ 0.55
PTPN13-204ENST00000436978 KIF5BP33176 963 aa18.46■□□□□ 0.55
PTPN13-204ENST00000436978 C8orf76Q96K31 380 aa18.46■□□□□ 0.55
PTPN13-204ENST00000436978 KIF20AO95235 890 aa18.46■□□□□ 0.55
PTPN13-204ENST00000436978 GSTO1P78417 241 aa18.46■□□□□ 0.55
PTPN13-204ENST00000436978 IDI1Q13907 227 aa18.46■□□□□ 0.55
PTPN13-204ENST00000436978 FKBP15Q5T1M5 1219 aa18.46■□□□□ 0.55
PTPN13-204ENST00000436978 PYM1Q9BRP8 204 aaKnown RBP18.46■□□□□ 0.55
PTPN13-204ENST00000436978 MAST1Q9Y2H9 1570 aa18.46■□□□□ 0.55
PTPN13-204ENST00000436978 FOXO3O43524 673 aa18.46■□□□□ 0.54
PTPN13-204ENST00000436978 CCDC96Q2M329 555 aa18.46■□□□□ 0.54
PTPN13-204ENST00000436978 MAP3K2Q9Y2U5 619 aa18.46■□□□□ 0.54
PTPN13-204ENST00000436978 ABCC1P33527 1531 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 CTAGE5O15320 804 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 PLCH2O75038 1416 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 VPS36Q86VN1 386 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 CCDC148Q8NFR7 591 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 PRPF40BQ6NWY9 871 aaKnown RBP18.45■□□□□ 0.54
PTPN13-204ENST00000436978 DDX46Q7L014 1031 aaKnown RBP18.45■□□□□ 0.54
PTPN13-204ENST00000436978 PIBF1Q8WXW3 757 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 MPHOSPH6Q99547 160 aaKnown RBP18.45■□□□□ 0.54
PTPN13-204ENST00000436978 GRPEL1Q9HAV7 217 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 PPIP5K1Q6PFW1 1433 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 CCDC66A2RUB6 948 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 PDE4BQ07343 736 aa18.45■□□□□ 0.54
PTPN13-204ENST00000436978 CCDC112Q8NEF3 446 aa18.44■□□□□ 0.54
PTPN13-204ENST00000436978 TAF4BQ92750 862 aa18.44■□□□□ 0.54
PTPN13-204ENST00000436978 FLIIQ13045 1269 aa18.44■□□□□ 0.54
PTPN13-204ENST00000436978 PPP4R3BQ5MIZ7 849 aa18.44■□□□□ 0.54
PTPN13-204ENST00000436978 KIF1BO60333 1816 aa18.44■□□□□ 0.54
PTPN13-204ENST00000436978 KDM5AP29375 1690 aaKnown RBP18.44■□□□□ 0.54
PTPN13-204ENST00000436978 BAG4O95429 457 aaKnown RBP18.43■□□□□ 0.54
PTPN13-204ENST00000436978 ENOX2Q16206 610 aaKnown RBP18.43■□□□□ 0.54
PTPN13-204ENST00000436978 LDHCP07864 332 aa18.43■□□□□ 0.54
PTPN13-204ENST00000436978 SKIDA1Q1XH10 827 aa18.43■□□□□ 0.54
PTPN13-204ENST00000436978 RANBP6O60518 1105 aaKnown RBP18.43■□□□□ 0.54
PTPN13-204ENST00000436978 DDX11Q96FC9 970 aa18.43■□□□□ 0.54
PTPN13-204ENST00000436978 THUMPD2Q9BTF0 503 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms