RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 CWC15Q9P013 229 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-209ENST00000436712 MPHOSPH10O00566 681 aaKnown RBP9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 KCNA6P17658 529 aa9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 WDR43Q15061 677 aaKnown RBP eCLIP9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 NOM1Q5C9Z4 860 aaKnown RBP9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 CCDC146Q8IYE0 955 aa9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 ABCC11Q96J66 1382 aa9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 LIG1P18858 919 aa9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 DUSP27Q5VZP5 1158 aa9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 SRLQ86TD4 932 aa9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 C17orf53Q8N3J3 647 aaPredicted RBP9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 ZNF513Q8N8E2 541 aaPredicted RBP9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 FAM210AQ96ND0 272 aa9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 NBPF3Q9H094 633 aa9.53□□□□□ -0.88
GAPVD1-209ENST00000436712 MED14O60244 1454 aa9.52□□□□□ -0.89
GAPVD1-209ENST00000436712 CCDC196A0A1B0GTZ2 297 aa9.52□□□□□ -0.89
GAPVD1-209ENST00000436712 MAP2K2P36507 400 aa9.52□□□□□ -0.89
GAPVD1-209ENST00000436712 PPP2R5AQ15172 486 aa9.52□□□□□ -0.89
GAPVD1-209ENST00000436712 ZC3H12AQ5D1E8 599 aaKnown RBP9.52□□□□□ -0.89
GAPVD1-209ENST00000436712 LCMT1Q9UIC8 334 aa9.52□□□□□ -0.89
GAPVD1-209ENST00000436712 KNDC1Q76NI1 1749 aa9.52□□□□□ -0.89
GAPVD1-209ENST00000436712 CPS1P31327 1500 aa9.52□□□□□ -0.89
GAPVD1-209ENST00000436712 SSFA2P28290 1259 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 MAP9Q49MG5 647 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 KRBA2Q6ZNG9 492 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 ANKRD20A12PQ8NF67 263 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 DLC1Q96QB1 1528 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 NSD3Q9BZ95 1437 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 SMTNL1A8MU46 457 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 MCTP2Q6DN12 878 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 KIAA1524Q8TCG1 905 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 TBC1D22AQ8WUA7 517 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 CEP89Q96ST8 783 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 LMBRD1Q9NUN5 540 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 NPHP4O75161 1426 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 ZNF521Q96K83 1311 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 PLEKHG2Q9H7P9 1386 aa9.51□□□□□ -0.89
GAPVD1-209ENST00000436712 RBM6P78332 1123 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 TEX35Q5T0J7 233 aa9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 CCDC191Q8NCU4 936 aa9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 TTC12Q9H892 705 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 ST7Q9NRC1 585 aa9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 CABP1Q9NZU7 370 aa9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 TBX22Q9Y458 520 aa9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 APAF1O14727 1248 aa9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 MAGEA9P43362 315 aa9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 KMT5BQ4FZB7 885 aa9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 RRP15Q9Y3B9 282 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-209ENST00000436712 WASLO00401 505 aaPredicted RBP9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 ZNF526Q8TF50 670 aaPredicted RBP9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 PAXBP1Q9Y5B6 917 aa9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 H0YHG0 523 aa9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 SARNPP82979 210 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 RABEP1Q15276 862 aa9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 E2F4Q16254 413 aa9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 ZSCAN26Q16670 478 aa9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 SLFNL1Q499Z3 407 aa9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 TECPR2O15040 1411 aa9.49□□□□□ -0.89
GAPVD1-209ENST00000436712 CTAGE5O15320 804 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 MTA1Q13330 715 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 BMS1Q14692 1282 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 UVSSAQ2YD98 709 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 NEK11Q8NG66 645 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 DMRT2Q9Y5R5 561 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 DIP2AQ14689 1571 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 XRN1Q8IZH2 1706 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 SYCE3A1L190 88 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 SLFN5Q08AF3 891 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 MCTP1Q6DN14 999 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 FAM184AQ8NB25 1140 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 RNF214Q8ND24 703 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 PRR36Q9H6K5 1346 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
GAPVD1-209ENST00000436712 ANKRD33BA6NCL7 494 aa9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 NUDT16Q96DE0 195 aaKnown RBP9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 LRRFIP2Q9Y608 721 aaKnown RBP9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 PPIP5K1Q6PFW1 1433 aa9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 RGPD8O14715 1765 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 TPM3P06753 285 aa9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 NUCB2P80303 420 aa9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 GPS2Q13227 327 aa9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 ANKRD23Q86SG2 305 aa9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 TRMT2AQ8IZ69 625 aaKnown RBP9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 PAIP2Q9BPZ3 127 aaKnown RBP9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 CGNL1Q0VF96 1302 aa9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 CHD2O14647 1828 aaKnown RBP9.47□□□□□ -0.89
GAPVD1-209ENST00000436712 IPO8O15397 1037 aaKnown RBP9.46□□□□□ -0.89
GAPVD1-209ENST00000436712 IPO7O95373 1038 aaKnown RBP9.46□□□□□ -0.89
GAPVD1-209ENST00000436712 INHBEP58166 350 aa9.46□□□□□ -0.89
GAPVD1-209ENST00000436712 CCDC96Q2M329 555 aa9.46□□□□□ -0.89
GAPVD1-209ENST00000436712 FBXO18Q8NFZ0 1043 aa9.46□□□□□ -0.89
GAPVD1-209ENST00000436712 GOLGA5Q8TBA6 731 aa9.46□□□□□ -0.89
GAPVD1-209ENST00000436712 PMFBP1Q8TBY8 1022 aa9.46□□□□□ -0.89
GAPVD1-209ENST00000436712 GPT2Q8TD30 523 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms