RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 CHL1O00533 1208 aa23.28■■□□□ 1.32
FAM3A-212ENST00000434658 BECN1Q14457 450 aa23.28■■□□□ 1.32
FAM3A-212ENST00000434658 NHSQ6T4R5 1651 aa23.27■■□□□ 1.32
FAM3A-212ENST00000434658 MTHFSDQ2M296 383 aaKnown RBP23.26■■□□□ 1.31
FAM3A-212ENST00000434658 C1orf141Q5JVX7 400 aa23.26■■□□□ 1.31
FAM3A-212ENST00000434658 DOT1LQ8TEK3 1739 aa23.26■■□□□ 1.31
FAM3A-212ENST00000434658 GCC1Q96CN9 775 aa23.26■■□□□ 1.31
FAM3A-212ENST00000434658 NFKBIBQ15653 356 aa23.25■■□□□ 1.31
FAM3A-212ENST00000434658 HSP90AB1P08238 724 aaKnown RBP23.24■■□□□ 1.31
FAM3A-212ENST00000434658 EZH2Q15910 746 aaKnown RBP23.24■■□□□ 1.31
FAM3A-212ENST00000434658 CAMKK2Q96RR4 588 aa23.24■■□□□ 1.31
FAM3A-212ENST00000434658 CHD1LQ86WJ1 897 aa23.24■■□□□ 1.31
FAM3A-212ENST00000434658 PLSCR1O15162 318 aa23.23■■□□□ 1.31
FAM3A-212ENST00000434658 AKAP4Q5JQC9 854 aa23.23■■□□□ 1.31
FAM3A-212ENST00000434658 MCM10Q7L590 875 aa23.22■■□□□ 1.31
FAM3A-212ENST00000434658 DCAF5Q96JK2 942 aa23.22■■□□□ 1.31
FAM3A-212ENST00000434658 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
FAM3A-212ENST00000434658 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
FAM3A-212ENST00000434658 BTAF1O14981 1849 aa23.2■■□□□ 1.3
FAM3A-212ENST00000434658 TOGARAM1Q9Y4F4 1720 aa23.2■■□□□ 1.3
FAM3A-212ENST00000434658 INTS3Q68E01 1043 aaKnown RBP23.19■■□□□ 1.3
FAM3A-212ENST00000434658 LNPKQ9C0E8 428 aa23.19■■□□□ 1.3
FAM3A-212ENST00000434658 SIRT2Q8IXJ6 389 aa23.19■■□□□ 1.3
FAM3A-212ENST00000434658 C1orf115Q9H7X2 142 aa23.19■■□□□ 1.3
FAM3A-212ENST00000434658 KDM6AO15550 1401 aaPredicted RBP23.18■■□□□ 1.3
FAM3A-212ENST00000434658 ERVV-2B6SEH9 535 aa23.17■■□□□ 1.3
FAM3A-212ENST00000434658 PIGBQ92521 554 aa23.17■■□□□ 1.3
FAM3A-212ENST00000434658 TMOD3Q9NYL9 352 aa23.17■■□□□ 1.3
FAM3A-212ENST00000434658 ITGB4P16144 1822 aa23.16■■□□□ 1.3
FAM3A-212ENST00000434658 PTPRCP08575 1304 aa23.16■■□□□ 1.3
FAM3A-212ENST00000434658 KRT24Q2M2I5 525 aa23.16■■□□□ 1.3
FAM3A-212ENST00000434658 BMP2KLQ5H9B9 411 aa23.16■■□□□ 1.3
FAM3A-212ENST00000434658 C22orf23Q9BZE7 217 aa23.16■■□□□ 1.3
FAM3A-212ENST00000434658 MAP3K5Q99683 1374 aa23.15■■□□□ 1.3
FAM3A-212ENST00000434658 GNAT3A8MTJ3 354 aa23.15■■□□□ 1.3
FAM3A-212ENST00000434658 PROM2Q8N271 834 aa23.15■■□□□ 1.3
FAM3A-212ENST00000434658 LGR6Q9HBX8 967 aa23.15■■□□□ 1.3
FAM3A-212ENST00000434658 CABP4P57796 275 aa23.15■■□□□ 1.3
FAM3A-212ENST00000434658 TXNRD1Q16881 649 aa23.15■■□□□ 1.3
FAM3A-212ENST00000434658 ANKRD45Q5TZF3 282 aa23.15■■□□□ 1.3
FAM3A-212ENST00000434658 RNMTO43148 476 aaKnown RBP23.14■■□□□ 1.29
FAM3A-212ENST00000434658 MFAP1P55081 439 aaKnown RBP23.14■■□□□ 1.29
FAM3A-212ENST00000434658 RGPD3A6NKT7 1758 aaPredicted RBP23.13■■□□□ 1.29
FAM3A-212ENST00000434658 RGPD4Q7Z3J3 1758 aa23.13■■□□□ 1.29
FAM3A-212ENST00000434658 RTF1Q92541 710 aaKnown RBP23.13■■□□□ 1.29
FAM3A-212ENST00000434658 TBC1D2Q9BYX2 928 aa23.13■■□□□ 1.29
FAM3A-212ENST00000434658 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
FAM3A-212ENST00000434658 NFATC2IPQ8NCF5 419 aa23.12■■□□□ 1.29
FAM3A-212ENST00000434658 ATP10DQ9P241 1426 aa23.11■■□□□ 1.29
FAM3A-212ENST00000434658 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
FAM3A-212ENST00000434658 RREB1Q92766 1687 aa23.1■■□□□ 1.29
FAM3A-212ENST00000434658 IL17REQ8NFR9 667 aa23.1■■□□□ 1.29
FAM3A-212ENST00000434658 SMARCC1Q92922 1105 aaPredicted RBP23.1■■□□□ 1.29
FAM3A-212ENST00000434658 ANTXR1Q9H6X2 564 aa23.1■■□□□ 1.29
FAM3A-212ENST00000434658 SLC52A2Q9HAB3 445 aa23.09■■□□□ 1.29
FAM3A-212ENST00000434658 TSPYL4Q9UJ04 414 aa23.09■■□□□ 1.29
FAM3A-212ENST00000434658 ASAP1Q9ULH1 1129 aa23.09■■□□□ 1.29
FAM3A-212ENST00000434658 ANKRD44Q8N8A2 993 aa23.08■■□□□ 1.29
FAM3A-212ENST00000434658 DCTPP1Q9H773 170 aa23.08■■□□□ 1.29
FAM3A-212ENST00000434658 ATG3Q9NT62 314 aa23.08■■□□□ 1.29
FAM3A-212ENST00000434658 PALLDQ8WX93 1383 aa23.08■■□□□ 1.29
FAM3A-212ENST00000434658 FRAT2O75474 233 aaPredicted RBP23.08■■□□□ 1.28
FAM3A-212ENST00000434658 RBM25P49756 843 aaKnown RBP23.08■■□□□ 1.28
FAM3A-212ENST00000434658 BCL11AQ9H165 835 aa23.08■■□□□ 1.28
FAM3A-212ENST00000434658 SLC27A3Q5K4L6 730 aa23.07■■□□□ 1.28
FAM3A-212ENST00000434658 RPAP2Q8IXW5 612 aaPredicted RBP23.07■■□□□ 1.28
FAM3A-212ENST00000434658 LRRC4BQ9NT99 713 aa23.07■■□□□ 1.28
FAM3A-212ENST00000434658 NUP188Q5SRE5 1749 aa23.07■■□□□ 1.28
FAM3A-212ENST00000434658 KCNQ4P56696 695 aa23.06■■□□□ 1.28
FAM3A-212ENST00000434658 NBPF14Q5TI25 921 aa23.06■■□□□ 1.28
FAM3A-212ENST00000434658 CACNA1FO60840 1977 aa23.06■■□□□ 1.28
FAM3A-212ENST00000434658 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
FAM3A-212ENST00000434658 CCNL1Q9UK58 526 aaPredicted RBP23.05■■□□□ 1.28
FAM3A-212ENST00000434658 LY75O60449 1722 aa23.05■■□□□ 1.28
FAM3A-212ENST00000434658 SLC4A2P04920 1241 aa23.05■■□□□ 1.28
FAM3A-212ENST00000434658 MIS18AQ9NYP9 233 aa23.05■■□□□ 1.28
FAM3A-212ENST00000434658 TEFQ10587 303 aa23.04■■□□□ 1.28
FAM3A-212ENST00000434658 SLKQ9H2G2 1235 aaPredicted RBP23.04■■□□□ 1.28
FAM3A-212ENST00000434658 CEP85Q6P2H3 762 aa23.03■■□□□ 1.28
FAM3A-212ENST00000434658 CEMIPQ8WUJ3 1361 aa23.03■■□□□ 1.28
FAM3A-212ENST00000434658 GSE1Q14687 1217 aa23.03■■□□□ 1.28
FAM3A-212ENST00000434658 MRC1P22897 1456 aa23.03■■□□□ 1.28
FAM3A-212ENST00000434658 SOS1Q07889 1333 aaPredicted RBP23.03■■□□□ 1.28
FAM3A-212ENST00000434658 N4BP2Q86UW6 1770 aaPredicted RBP23.02■■□□□ 1.28
FAM3A-212ENST00000434658 BABAM1Q9NWV8 329 aa23.01■■□□□ 1.27
FAM3A-212ENST00000434658 LOC102724428A0A0B4J2F2 783 aa23.01■■□□□ 1.27
FAM3A-212ENST00000434658 SIK1P57059 783 aa23.01■■□□□ 1.27
FAM3A-212ENST00000434658 R3HDM1Q15032 1099 aaKnown RBP23.01■■□□□ 1.27
FAM3A-212ENST00000434658 RBM42Q9BTD8 480 aaKnown RBP23.01■■□□□ 1.27
FAM3A-212ENST00000434658 PSDA5PKW4 1024 aaPredicted RBP23■■□□□ 1.27
FAM3A-212ENST00000434658 MEIS3Q99687 375 aa23■■□□□ 1.27
FAM3A-212ENST00000434658 ANO8Q9HCE9 1232 aaPredicted RBP23■■□□□ 1.27
FAM3A-212ENST00000434658 CCT4P50991 539 aaKnown RBP22.99■■□□□ 1.27
FAM3A-212ENST00000434658 SLC39A6Q13433 755 aa22.99■■□□□ 1.27
FAM3A-212ENST00000434658 PLEKHM2Q8IWE5 1019 aa22.99■■□□□ 1.27
FAM3A-212ENST00000434658 STK32BQ9NY57 414 aa22.99■■□□□ 1.27
FAM3A-212ENST00000434658 PTCD1O75127 700 aaKnown RBP22.98■■□□□ 1.27
FAM3A-212ENST00000434658 TBC1D9Q6ZT07 1266 aa22.98■■□□□ 1.27
FAM3A-212ENST00000434658 G2E3Q7L622 706 aa22.98■■□□□ 1.27
FAM3A-212ENST00000434658 ATP6V1AP38606 617 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms