RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 SMC3Q9UQE7 1217 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 NIP7Q9Y221 180 aaKnown RBP eCLIP8.51□□□□□ -1.05
ATXN3-204ENST00000429774 MAP3K5Q99683 1374 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 DZIP3Q86Y13 1208 aaKnown RBP8.51□□□□□ -1.05
ATXN3-204ENST00000429774 AKAP2Q9Y2D5 859 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 RNMTO43148 476 aaKnown RBP8.51□□□□□ -1.05
ATXN3-204ENST00000429774 SLC5A1P13866 664 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 USP5P45974 858 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 C20orf194Q5TEA3 1177 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 ARHGEF10O15013 1369 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 NBPF14Q5TI25 921 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 PIBF1Q8WXW3 757 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 BOLA2Q9H3K6 86 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 PARP3Q9Y6F1 533 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 GNPATO15228 680 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 COPS6Q7L5N1 327 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 CLTCL1P53675 1640 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 NRDCO43847 1150 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 ANKRD13DQ6ZTN6 518 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 UBE3BQ7Z3V4 1068 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 DZIP1Q86YF9 867 aaKnown RBP8.5□□□□□ -1.05
ATXN3-204ENST00000429774 APBA3O96018 575 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 IFIT1P09914 478 aaKnown RBP8.5□□□□□ -1.05
ATXN3-204ENST00000429774 CCDC43Q96MW1 224 aaKnown RBP8.5□□□□□ -1.05
ATXN3-204ENST00000429774 NACAP1Q9BZK3 213 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 PDE4CQ08493 712 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 NUP133Q8WUM0 1156 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 IQGAP3Q86VI3 1631 aa8.5□□□□□ -1.05
ATXN3-204ENST00000429774 PTPRCP08575 1304 aa8.49□□□□□ -1.05
ATXN3-204ENST00000429774 ZFYVE9O95405 1425 aa8.49□□□□□ -1.05
ATXN3-204ENST00000429774 CCDC69A6NI79 296 aa8.49□□□□□ -1.05
ATXN3-204ENST00000429774 PHACTR3Q96KR7 559 aa8.49□□□□□ -1.05
ATXN3-204ENST00000429774 QTRT2Q9H974 415 aaKnown RBP8.49□□□□□ -1.05
ATXN3-204ENST00000429774 CCNL1Q9UK58 526 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-204ENST00000429774 PIK3R4Q99570 1358 aa8.49□□□□□ -1.05
ATXN3-204ENST00000429774 PRDM15P57071 1507 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-204ENST00000429774 POLR3DP05423 398 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-204ENST00000429774 PRIM1P49642 420 aaKnown RBP8.49□□□□□ -1.05
ATXN3-204ENST00000429774 SAFBQ15424 915 aaKnown RBP eCLIP8.49□□□□□ -1.05
ATXN3-204ENST00000429774 C8orf58Q8NAV2 365 aa8.49□□□□□ -1.05
ATXN3-204ENST00000429774 AIDAQ96BJ3 306 aa8.49□□□□□ -1.05
ATXN3-204ENST00000429774 MAP3K4Q9Y6R4 1608 aa8.49□□□□□ -1.05
ATXN3-204ENST00000429774 POLD1P28340 1107 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 BRMS1Q9HCU9 246 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 TRAPPC3LQ5T215 181 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 TMOD2Q9NZR1 351 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 KRT24Q2M2I5 525 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 CCDC152Q4G0S7 254 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 MINDY4BA8MYZ0 360 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 DCAF5Q96JK2 942 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 CDC5LQ99459 802 aaKnown RBP8.48□□□□□ -1.05
ATXN3-204ENST00000429774 UTP14AQ9BVJ6 771 aaKnown RBP8.48□□□□□ -1.05
ATXN3-204ENST00000429774 LDHAL6AQ6ZMR3 332 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 KIF1BPQ96EK5 621 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
ATXN3-204ENST00000429774 CRACR2BQ8N4Y2 399 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-204ENST00000429774 F8W031 263 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-204ENST00000429774 RAB11FIP3O75154 756 aa8.47□□□□□ -1.05
ATXN3-204ENST00000429774 TRIM27P14373 513 aa8.47□□□□□ -1.05
ATXN3-204ENST00000429774 NOC3LQ8WTT2 800 aaKnown RBP8.47□□□□□ -1.05
ATXN3-204ENST00000429774 LGR6Q9HBX8 967 aa8.47□□□□□ -1.05
ATXN3-204ENST00000429774 XBP1P17861 261 aa8.47□□□□□ -1.05
ATXN3-204ENST00000429774 ATP2B1P20020 1258 aa8.47□□□□□ -1.05
ATXN3-204ENST00000429774 FAM43AQ8N2R8 423 aa8.47□□□□□ -1.05
ATXN3-204ENST00000429774 ROBO2Q9HCK4 1378 aa8.47□□□□□ -1.05
ATXN3-204ENST00000429774 E9PCH4 1651 aa8.47□□□□□ -1.05
ATXN3-204ENST00000429774 STK32BQ9NY57 414 aa8.47□□□□□ -1.05
ATXN3-204ENST00000429774 RIMBP2O15034 1052 aa8.46□□□□□ -1.05
ATXN3-204ENST00000429774 RPAP2Q8IXW5 612 aaPredicted RBP8.46□□□□□ -1.05
ATXN3-204ENST00000429774 SETQ01105 290 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-204ENST00000429774 FAM182BQ5T319 152 aa8.46□□□□□ -1.06
ATXN3-204ENST00000429774 ATP6V1DQ9Y5K8 247 aa8.46□□□□□ -1.06
ATXN3-204ENST00000429774 NEK4P51957 841 aa8.46□□□□□ -1.06
ATXN3-204ENST00000429774 ANKRD18AQ8IVF6 992 aa8.46□□□□□ -1.06
ATXN3-204ENST00000429774 BICD2Q8TD16 824 aa8.46□□□□□ -1.06
ATXN3-204ENST00000429774 NYXQ9GZU5 481 aa8.46□□□□□ -1.06
ATXN3-204ENST00000429774 IQSEC3Q9UPP2 1182 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-204ENST00000429774 GRM1Q13255 1194 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 ABCA6Q8N139 1617 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 QRICH2Q9H0J4 1663 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 IL13P35225 146 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 CCDC24Q8N4L8 307 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 MSL1Q68DK7 614 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 PUS7Q96PZ0 661 aaKnown RBP8.45□□□□□ -1.06
ATXN3-204ENST00000429774 SNRKQ9NRH2 765 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 PIK3C2GO75747 1445 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 TSHZ3Q63HK5 1081 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 CDCA7Q9BWT1 371 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-204ENST00000429774 CLEC11AQ9Y240 323 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 CEBPZQ03701 1054 aaKnown RBP8.45□□□□□ -1.06
ATXN3-204ENST00000429774 NLRP3Q96P20 1036 aa8.45□□□□□ -1.06
ATXN3-204ENST00000429774 MX1P20591 662 aa8.44□□□□□ -1.06
ATXN3-204ENST00000429774 SKAP1Q86WV1 359 aa8.44□□□□□ -1.06
ATXN3-204ENST00000429774 MKNK2Q9HBH9 465 aa8.44□□□□□ -1.06
ATXN3-204ENST00000429774 TPM2P07951 284 aa8.44□□□□□ -1.06
ATXN3-204ENST00000429774 TSPYL6Q8N831 410 aa8.44□□□□□ -1.06
ATXN3-204ENST00000429774 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-204ENST00000429774 FER1L4A9Z1Z3 1794 aa8.44□□□□□ -1.06
ATXN3-204ENST00000429774 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms