RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 KSR2Q6VAB6 950 aa30.59■■■□□ 2.49
DNMT3A-206ENST00000406659 PCDH11XQ9BZA7 1347 aa30.58■■■□□ 2.49
DNMT3A-206ENST00000406659 PCDH11YQ9BZA8 1340 aa30.58■■■□□ 2.49
DNMT3A-206ENST00000406659 TTC22Q5TAA0 569 aa30.58■■■□□ 2.49
DNMT3A-206ENST00000406659 MAP3K2Q9Y2U5 619 aa30.58■■■□□ 2.49
DNMT3A-206ENST00000406659 STRN4Q9NRL3 753 aa30.57■■■□□ 2.48
DNMT3A-206ENST00000406659 DDX58O95786 925 aaKnown RBP30.56■■■□□ 2.48
DNMT3A-206ENST00000406659 EXOC6BQ9Y2D4 811 aa30.56■■■□□ 2.48
DNMT3A-206ENST00000406659 OTUD7AQ8TE49 926 aaPredicted RBP30.56■■■□□ 2.48
DNMT3A-206ENST00000406659 ZNF496Q96IT1 587 aaPredicted RBP30.56■■■□□ 2.48
DNMT3A-206ENST00000406659 IL2RBP14784 551 aa30.55■■■□□ 2.48
DNMT3A-206ENST00000406659 GSPT1P15170 499 aaKnown RBP30.55■■■□□ 2.48
DNMT3A-206ENST00000406659 CDC45O75419 566 aa30.54■■■□□ 2.48
DNMT3A-206ENST00000406659 ALDH1L1O75891 902 aa30.54■■■□□ 2.48
DNMT3A-206ENST00000406659 FMNL2Q96PY5 1086 aa30.54■■■□□ 2.48
DNMT3A-206ENST00000406659 SNRPA1P09661 255 aaKnown RBP30.54■■■□□ 2.48
DNMT3A-206ENST00000406659 PDIA6Q15084 440 aa30.54■■■□□ 2.48
DNMT3A-206ENST00000406659 TBC1D9Q6ZT07 1266 aa30.54■■■□□ 2.48
DNMT3A-206ENST00000406659 LRRCC1Q9C099 1032 aa30.54■■■□□ 2.48
DNMT3A-206ENST00000406659 LARP1Q6PKG0 1096 aaKnown RBP30.53■■■□□ 2.48
DNMT3A-206ENST00000406659 SSH3Q8TE77 659 aa30.52■■■□□ 2.48
DNMT3A-206ENST00000406659 C5P01031 1676 aa30.52■■■□□ 2.48
DNMT3A-206ENST00000406659 NBPF7P0C2Y1 421 aaPredicted RBP30.51■■■□□ 2.48
DNMT3A-206ENST00000406659 AIMP1Q12904 312 aaKnown RBP30.51■■■□□ 2.48
DNMT3A-206ENST00000406659 NBR1Q14596 966 aa30.51■■■□□ 2.47
DNMT3A-206ENST00000406659 EIF5BO60841 1220 aaKnown RBP30.5■■■□□ 2.47
DNMT3A-206ENST00000406659 PPP1R42Q7Z4L9 355 aa30.5■■■□□ 2.47
DNMT3A-206ENST00000406659 IBTKQ9P2D0 1353 aaPredicted RBP30.5■■■□□ 2.47
DNMT3A-206ENST00000406659 ERVV-2B6SEH9 535 aa30.49■■■□□ 2.47
DNMT3A-206ENST00000406659 C9orf78Q9NZ63 289 aaPredicted RBP30.49■■■□□ 2.47
DNMT3A-206ENST00000406659 HDAC5Q9UQL6 1122 aa30.49■■■□□ 2.47
DNMT3A-206ENST00000406659 MYL6BP14649 208 aa30.48■■■□□ 2.47
DNMT3A-206ENST00000406659 MYT1Q01538 1121 aa30.48■■■□□ 2.47
DNMT3A-206ENST00000406659 POLA2Q14181 598 aa30.48■■■□□ 2.47
DNMT3A-206ENST00000406659 LINS1Q8NG48 757 aa30.47■■■□□ 2.47
DNMT3A-206ENST00000406659 NKX1-1Q15270 411 aaPredicted RBP30.46■■■□□ 2.47
DNMT3A-206ENST00000406659 RIC3Q7Z5B4 369 aa30.46■■■□□ 2.47
DNMT3A-206ENST00000406659 OSBPL3Q9H4L5 887 aa30.46■■■□□ 2.47
DNMT3A-206ENST00000406659 USP16Q9Y5T5 823 aa30.46■■■□□ 2.47
DNMT3A-206ENST00000406659 RBM25P49756 843 aaKnown RBP30.46■■■□□ 2.47
DNMT3A-206ENST00000406659 PDE1AP54750 535 aa30.46■■■□□ 2.47
DNMT3A-206ENST00000406659 DDX54Q8TDD1 881 aaKnown RBP30.46■■■□□ 2.47
DNMT3A-206ENST00000406659 SRGAP3O43295 1099 aa30.45■■■□□ 2.46
DNMT3A-206ENST00000406659 RAB11FIP3O75154 756 aa30.45■■■□□ 2.46
DNMT3A-206ENST00000406659 XAGE3Q8WTP9 111 aa30.44■■■□□ 2.46
DNMT3A-206ENST00000406659 SDSP20132 328 aa30.43■■■□□ 2.46
DNMT3A-206ENST00000406659 CWF19L2Q2TBE0 894 aaKnown RBP30.43■■■□□ 2.46
DNMT3A-206ENST00000406659 SURF6O75683 361 aaKnown RBP30.43■■■□□ 2.46
DNMT3A-206ENST00000406659 COPS6Q7L5N1 327 aa30.43■■■□□ 2.46
DNMT3A-206ENST00000406659 BTG4Q9NY30 223 aa30.43■■■□□ 2.46
DNMT3A-206ENST00000406659 ROBO1Q9Y6N7 1651 aa30.42■■■□□ 2.46
DNMT3A-206ENST00000406659 CASC1Q6TDU7 716 aa30.42■■■□□ 2.46
DNMT3A-206ENST00000406659 NEXNQ0ZGT2 675 aa30.41■■■□□ 2.46
DNMT3A-206ENST00000406659 TBC1D2Q9BYX2 928 aa30.41■■■□□ 2.46
DNMT3A-206ENST00000406659 USP35Q9P2H5 1018 aa30.4■■■□□ 2.46
DNMT3A-206ENST00000406659 SALL3Q9BXA9 1300 aa30.39■■■□□ 2.46
DNMT3A-206ENST00000406659 GRM8O00222 908 aa30.39■■■□□ 2.46
DNMT3A-206ENST00000406659 MX1P20591 662 aa30.39■■■□□ 2.46
DNMT3A-206ENST00000406659 HSP90AB4PQ58FF6 505 aa30.39■■■□□ 2.46
DNMT3A-206ENST00000406659 MTX1Q13505 466 aa30.38■■■□□ 2.45
DNMT3A-206ENST00000406659 AHDC1Q5TGY3 1603 aaPredicted RBP30.38■■■□□ 2.45
DNMT3A-206ENST00000406659 ANKRD13DQ6ZTN6 518 aa30.38■■■□□ 2.45
DNMT3A-206ENST00000406659 METTL22Q9BUU2 404 aaPredicted RBP30.37■■■□□ 2.45
DNMT3A-206ENST00000406659 UTYO14607 1347 aa30.36■■■□□ 2.45
DNMT3A-206ENST00000406659 SHANK3Q9BYB0 1731 aa30.36■■■□□ 2.45
DNMT3A-206ENST00000406659 RTL5Q5HYW3 569 aaPredicted RBP30.36■■■□□ 2.45
DNMT3A-206ENST00000406659 LRP10Q7Z4F1 713 aa30.36■■■□□ 2.45
DNMT3A-206ENST00000406659 KIF1BPQ96EK5 621 aa30.36■■■□□ 2.45
DNMT3A-206ENST00000406659 STAP2Q9UGK3 403 aa30.36■■■□□ 2.45
DNMT3A-206ENST00000406659 IGKV5-2P06315 115 aa30.36■■■□□ 2.45
DNMT3A-206ENST00000406659 COL14A1Q05707 1796 aaKnown RBP30.35■■■□□ 2.45
DNMT3A-206ENST00000406659 PIP4K2AP48426 406 aaPredicted RBP30.35■■■□□ 2.45
DNMT3A-206ENST00000406659 RHPN1Q8TCX5 695 aa30.35■■■□□ 2.45
DNMT3A-206ENST00000406659 MYD88Q99836 296 aa30.35■■■□□ 2.45
DNMT3A-206ENST00000406659 IL1RAPL2Q9NP60 686 aa30.35■■■□□ 2.45
DNMT3A-206ENST00000406659 LAMB4A4D0S4 1761 aa30.34■■■□□ 2.45
DNMT3A-206ENST00000406659 ERBB4Q15303 1308 aa30.34■■■□□ 2.45
DNMT3A-206ENST00000406659 NEURL1BA8MQ27 555 aa30.33■■■□□ 2.45
DNMT3A-206ENST00000406659 AOX1Q06278 1338 aa30.32■■■□□ 2.44
DNMT3A-206ENST00000406659 OS9Q13438 667 aaPredicted RBP30.32■■■□□ 2.44
DNMT3A-206ENST00000406659 TSHZ3Q63HK5 1081 aa30.32■■■□□ 2.44
DNMT3A-206ENST00000406659 SUCLG2Q96I99 432 aa30.32■■■□□ 2.44
DNMT3A-206ENST00000406659 GLI3P10071 1580 aa30.32■■■□□ 2.44
DNMT3A-206ENST00000406659 LTBP4Q8N2S1 1624 aa30.31■■■□□ 2.44
DNMT3A-206ENST00000406659 COL22A1Q8NFW1 1626 aaPredicted RBP30.31■■■□□ 2.44
DNMT3A-206ENST00000406659 GCKRQ14397 625 aa30.31■■■□□ 2.44
DNMT3A-206ENST00000406659 HSCBQ8IWL3 235 aa30.3■■■□□ 2.44
DNMT3A-206ENST00000406659 TMOD3Q9NYL9 352 aa30.3■■■□□ 2.44
DNMT3A-206ENST00000406659 UBR2Q8IWV8 1755 aa30.3■■■□□ 2.44
DNMT3A-206ENST00000406659 PTCD1O75127 700 aaKnown RBP30.29■■■□□ 2.44
DNMT3A-206ENST00000406659 KCPQ6ZWJ8 1503 aa30.29■■■□□ 2.44
DNMT3A-206ENST00000406659 NUTM1Q86Y26 1132 aa30.28■■■□□ 2.44
DNMT3A-206ENST00000406659 BICC1Q9H694 974 aaKnown RBP30.28■■■□□ 2.44
DNMT3A-206ENST00000406659 PAPPAQ13219 1627 aa30.28■■■□□ 2.44
DNMT3A-206ENST00000406659 PLBD2Q8NHP8 589 aa30.28■■■□□ 2.44
DNMT3A-206ENST00000406659 ERC1Q8IUD2 1116 aa30.26■■■□□ 2.44
DNMT3A-206ENST00000406659 SNX21Q969T3 373 aa30.26■■■□□ 2.44
DNMT3A-206ENST00000406659 KAZALD1Q96I82 304 aa30.26■■■□□ 2.44
DNMT3A-206ENST00000406659 KIF2CQ99661 725 aa30.26■■■□□ 2.44
DNMT3A-206ENST00000406659 USP26Q9BXU7 913 aa30.26■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms