RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 CAMTA1Q9Y6Y1 1673 aa16.58■□□□□ 0.24
PMS2-204ENST00000406569 TRIM6-TRIM34B2RNG4 842 aa16.58■□□□□ 0.24
PMS2-204ENST00000406569 PPP1R42Q7Z4L9 355 aa16.58■□□□□ 0.24
PMS2-204ENST00000406569 ANP32BQ92688 251 aaKnown RBP16.58■□□□□ 0.24
PMS2-204ENST00000406569 NECTIN2Q92692 538 aa16.58■□□□□ 0.24
PMS2-204ENST00000406569 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
PMS2-204ENST00000406569 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
PMS2-204ENST00000406569 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
PMS2-204ENST00000406569 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
PMS2-204ENST00000406569 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
PMS2-204ENST00000406569 RHPN1Q8TCX5 695 aa16.57■□□□□ 0.24
PMS2-204ENST00000406569 KIF1BPQ96EK5 621 aa16.57■□□□□ 0.24
PMS2-204ENST00000406569 RBSNQ9H1K0 784 aa16.57■□□□□ 0.24
PMS2-204ENST00000406569 SIPA1L3O60292 1781 aaPredicted RBP16.57■□□□□ 0.24
PMS2-204ENST00000406569 RAD50Q92878 1312 aa16.56■□□□□ 0.24
PMS2-204ENST00000406569 MTX1Q13505 466 aa16.56■□□□□ 0.24
PMS2-204ENST00000406569 LRSAM1Q6UWE0 723 aa16.56■□□□□ 0.24
PMS2-204ENST00000406569 PHF8Q9UPP1 1060 aa16.56■□□□□ 0.24
PMS2-204ENST00000406569 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
PMS2-204ENST00000406569 SGSM2O43147 1006 aa16.56■□□□□ 0.24
PMS2-204ENST00000406569 HSP90AB4PQ58FF6 505 aa16.56■□□□□ 0.24
PMS2-204ENST00000406569 NUTM2GQ5VZR2 741 aa16.56■□□□□ 0.24
PMS2-204ENST00000406569 TMEM63CQ9P1W3 806 aa16.56■□□□□ 0.24
PMS2-204ENST00000406569 NCLP19338 710 aaKnown RBP16.55■□□□□ 0.24
PMS2-204ENST00000406569 DNAAF4Q8WXU2 420 aa16.55■□□□□ 0.24
PMS2-204ENST00000406569 IL25Q9H293 177 aa16.55■□□□□ 0.24
PMS2-204ENST00000406569 ADCY9O60503 1353 aa16.55■□□□□ 0.24
PMS2-204ENST00000406569 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
PMS2-204ENST00000406569 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
PMS2-204ENST00000406569 PRIM1P49642 420 aaKnown RBP16.54■□□□□ 0.24
PMS2-204ENST00000406569 IL1RAPL2Q9NP60 686 aa16.54■□□□□ 0.24
PMS2-204ENST00000406569 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
PMS2-204ENST00000406569 TCHHQ07283 1943 aa16.54■□□□□ 0.24
PMS2-204ENST00000406569 SLIT3O75094 1523 aa16.54■□□□□ 0.24
PMS2-204ENST00000406569 TTC41PQ6P2S7 1318 aa16.54■□□□□ 0.24
PMS2-204ENST00000406569 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
PMS2-204ENST00000406569 LTV1Q96GA3 475 aaPredicted RBP16.53■□□□□ 0.24
PMS2-204ENST00000406569 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
PMS2-204ENST00000406569 NAP1L5Q96NT1 182 aaPredicted RBP16.53■□□□□ 0.24
PMS2-204ENST00000406569 LSG1Q9H089 658 aaKnown RBP16.53■□□□□ 0.24
PMS2-204ENST00000406569 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
PMS2-204ENST00000406569 SETD1BQ9UPS6 1966 aaKnown RBP16.53■□□□□ 0.24
PMS2-204ENST00000406569 AKAP4Q5JQC9 854 aa16.53■□□□□ 0.24
PMS2-204ENST00000406569 NUTM1Q86Y26 1132 aa16.53■□□□□ 0.24
PMS2-204ENST00000406569 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
PMS2-204ENST00000406569 TTC14Q96N46 770 aa16.53■□□□□ 0.24
PMS2-204ENST00000406569 LGR6Q9HBX8 967 aa16.53■□□□□ 0.24
PMS2-204ENST00000406569 NSFL1CQ9UNZ2 370 aaKnown RBP16.53■□□□□ 0.24
PMS2-204ENST00000406569 WDR33Q9C0J8 1336 aaKnown RBP16.52■□□□□ 0.24
PMS2-204ENST00000406569 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
PMS2-204ENST00000406569 NBPF7P0C2Y1 421 aaPredicted RBP16.52■□□□□ 0.24
PMS2-204ENST00000406569 TMEM87AQ8NBN3 555 aa16.52■□□□□ 0.24
PMS2-204ENST00000406569 KCNH5Q8NCM2 988 aa16.52■□□□□ 0.24
PMS2-204ENST00000406569 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
PMS2-204ENST00000406569 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
PMS2-204ENST00000406569 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
PMS2-204ENST00000406569 SNX14Q9Y5W7 946 aa16.51■□□□□ 0.23
PMS2-204ENST00000406569 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
PMS2-204ENST00000406569 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
PMS2-204ENST00000406569 KCNB2Q92953 911 aa16.5■□□□□ 0.23
PMS2-204ENST00000406569 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
PMS2-204ENST00000406569 UPF3BQ9BZI7 483 aaKnown RBP16.5■□□□□ 0.23
PMS2-204ENST00000406569 GLRX3O76003 335 aaKnown RBP16.5■□□□□ 0.23
PMS2-204ENST00000406569 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
PMS2-204ENST00000406569 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
PMS2-204ENST00000406569 RPAP1Q9BWH6 1393 aaPredicted RBP16.5■□□□□ 0.23
PMS2-204ENST00000406569 EIF2S2P20042 333 aaKnown RBP16.49■□□□□ 0.23
PMS2-204ENST00000406569 PLEKHO1Q53GL0 409 aaPredicted RBP16.49■□□□□ 0.23
PMS2-204ENST00000406569 KLHL34Q8N239 644 aa16.49■□□□□ 0.23
PMS2-204ENST00000406569 PXDNQ92626 1479 aa16.48■□□□□ 0.23
PMS2-204ENST00000406569 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
PMS2-204ENST00000406569 KCNQ3O43525 872 aa16.48■□□□□ 0.23
PMS2-204ENST00000406569 OFD1O75665 1012 aa16.48■□□□□ 0.23
PMS2-204ENST00000406569 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
PMS2-204ENST00000406569 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
PMS2-204ENST00000406569 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
PMS2-204ENST00000406569 SYCE3A1L190 88 aa16.48■□□□□ 0.23
PMS2-204ENST00000406569 ZNF500O60304 480 aaPredicted RBP16.48■□□□□ 0.23
PMS2-204ENST00000406569 TPM2P07951 284 aa16.48■□□□□ 0.23
PMS2-204ENST00000406569 ZNF530Q6P9A1 599 aaPredicted RBP16.48■□□□□ 0.23
PMS2-204ENST00000406569 UTYO14607 1347 aa16.47■□□□□ 0.23
PMS2-204ENST00000406569 TRPM3Q9HCF6 1732 aaPredicted RBP16.47■□□□□ 0.23
PMS2-204ENST00000406569 BTBD11A6QL63 1104 aa16.47■□□□□ 0.23
PMS2-204ENST00000406569 MCM5P33992 734 aa16.47■□□□□ 0.23
PMS2-204ENST00000406569 TERF1P54274 439 aa16.47■□□□□ 0.23
PMS2-204ENST00000406569 TEFQ10587 303 aa16.47■□□□□ 0.23
PMS2-204ENST00000406569 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
PMS2-204ENST00000406569 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
PMS2-204ENST00000406569 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
PMS2-204ENST00000406569 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
PMS2-204ENST00000406569 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.23
PMS2-204ENST00000406569 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.46■□□□□ 0.23
PMS2-204ENST00000406569 LIMCH1Q9UPQ0 1083 aa16.46■□□□□ 0.23
PMS2-204ENST00000406569 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
PMS2-204ENST00000406569 KSR2Q6VAB6 950 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 ARHGEF25Q86VW2 580 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 RUFY2Q8WXA3 655 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 MST1RQ04912 1400 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 PHF14O94880 888 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 MAP4K4O95819 1239 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms