RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 MAGI3Q5TCQ9 1506 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 GSTO1P78417 241 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 ANKRD13DQ6ZTN6 518 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 MYO5CQ9NQX4 1742 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 CCDC69A6NI79 296 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 BAG3O95817 575 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 ANKRD18AQ8IVF6 992 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 RXRBP28702 533 aa13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 ANKRD1Q15327 319 aa13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 MPHOSPH10O00566 681 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 RRP9O43818 475 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 MCM2P49736 904 aa13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 TMEM132AQ24JP5 1023 aa13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 UTP14AQ9BVJ6 771 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 GRPEL1Q9HAV7 217 aa13.91□□□□□ -0.18
RAPGEF3-204ENST00000405493 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 LMOD1P29536 600 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 TTF1Q15361 905 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 FAM98CQ17RN3 349 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 LDHAL6AQ6ZMR3 332 aa13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 MCM4P33991 863 aa13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 ARHGEF5Q12774 1597 aa13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 IPO7O95373 1038 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 TXLNAP40222 546 aa13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 FLIIQ13045 1269 aa13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 KRT32Q14532 448 aa13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 CCDC70Q6NSX1 233 aa13.9□□□□□ -0.18
RAPGEF3-204ENST00000405493 APBA3O96018 575 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 PDCP20941 246 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 HOXC9P31274 260 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 RABEP1Q15276 862 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 DZIP3Q86Y13 1208 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 ESPNB1AK53 854 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 PTPRKQ15262 1439 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 CDKL5O76039 1030 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 PPP4R3BQ5MIZ7 849 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 HLA-DOAP06340 250 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 CDK5RAP3Q96JB5 506 aa13.89□□□□□ -0.19
RAPGEF3-204ENST00000405493 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 CAVIN1Q6NZI2 390 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 DISP3Q9P2K9 1392 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 SOS1Q07889 1333 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 ARHGEF12Q9NZN5 1544 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 UQCRFS1P1P0C7P4 283 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 CABP5Q9NP86 173 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 GLRX3O76003 335 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 LTKP29376 864 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 MKNK2Q9HBH9 465 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 MAP3K2Q9Y2U5 619 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 EDC4Q6P2E9 1401 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 GNPATO15228 680 aa13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 QTRT2Q9H974 415 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-204ENST00000405493 PLEKHG3A1L390 1219 aa13.87□□□□□ -0.19
RAPGEF3-204ENST00000405493 OLFM4Q6UX06 510 aa13.87□□□□□ -0.19
RAPGEF3-204ENST00000405493 CHD1LQ86WJ1 897 aa13.87□□□□□ -0.19
RAPGEF3-204ENST00000405493 RNF214Q8ND24 703 aa13.87□□□□□ -0.19
RAPGEF3-204ENST00000405493 IMMTQ16891 758 aaKnown RBP13.87□□□□□ -0.19
RAPGEF3-204ENST00000405493 MBD3O95983 291 aa13.87□□□□□ -0.19
RAPGEF3-204ENST00000405493 SBNO1A3KN83 1393 aa13.87□□□□□ -0.19
RAPGEF3-204ENST00000405493 PRPF40AO75400 957 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-204ENST00000405493 CCDC87Q9NVE4 849 aa13.86□□□□□ -0.19
RAPGEF3-204ENST00000405493 RBM17Q96I25 401 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-204ENST00000405493 ZC3H12CQ9C0D7 883 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-204ENST00000405493 RNF41Q9H4P4 317 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF3-204ENST00000405493 PARP10Q53GL7 1025 aa13.86□□□□□ -0.19
RAPGEF3-204ENST00000405493 MPHOSPH6Q99547 160 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-204ENST00000405493 NAT10Q9H0A0 1025 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-204ENST00000405493 ZNF804AQ7Z570 1209 aa13.86□□□□□ -0.19
RAPGEF3-204ENST00000405493 STK3Q13188 491 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 TNIP1Q15025 636 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 ZNF444Q8N0Y2 327 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 SDF4Q9BRK5 362 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 ALDH1L1O75891 902 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 STK11IPQ8N1F8 1099 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 ANKRD2Q9GZV1 360 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 MAP3K5Q99683 1374 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 WASF1Q92558 559 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 POLKQ9UBT6 870 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 CYP46A1Q9Y6A2 500 aa13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 COL17A1Q9UMD9 1497 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 RBM10P98175 930 aaKnown RBP13.85□□□□□ -0.19
RAPGEF3-204ENST00000405493 ASXL1Q8IXJ9 1541 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 CEBPZQ03701 1054 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 BABAM1Q9NWV8 329 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 MAP3K19Q56UN5 1328 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 ZCCHC11Q5TAX3 1644 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 ATP2B1P20020 1258 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 HMGN5P82970 282 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 HECW2Q9P2P5 1572 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 NOL7Q9UMY1 257 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 GPS2Q13227 327 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 FAM196AQ6ZSG2 479 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms