RNA–Protein interactions for RNA: ENST00000397016.6

CPNE6-201, Transcript of copine 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE6, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-201ENST00000397016 ZNF496Q96IT1 587 aaPredicted RBP20.51■□□□□ 0.87
CPNE6-201ENST00000397016 PKD1L3Q7Z443 1732 aa20.51■□□□□ 0.87
CPNE6-201ENST00000397016 N4BP2Q86UW6 1770 aaPredicted RBP20.51■□□□□ 0.87
CPNE6-201ENST00000397016 MAP3K2Q9Y2U5 619 aa20.5■□□□□ 0.87
CPNE6-201ENST00000397016 NHSL1Q5SYE7 1610 aa20.5■□□□□ 0.87
CPNE6-201ENST00000397016 NBPF7P0C2Y1 421 aaPredicted RBP20.5■□□□□ 0.87
CPNE6-201ENST00000397016 ATP8B2P98198 1209 aa20.5■□□□□ 0.87
CPNE6-201ENST00000397016 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
CPNE6-201ENST00000397016 CABP4P57796 275 aa20.49■□□□□ 0.87
CPNE6-201ENST00000397016 EVA1CP58658 441 aa20.49■□□□□ 0.87
CPNE6-201ENST00000397016 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
CPNE6-201ENST00000397016 MYL6BP14649 208 aa20.48■□□□□ 0.87
CPNE6-201ENST00000397016 PDIA6Q15084 440 aa20.48■□□□□ 0.87
CPNE6-201ENST00000397016 TTC5Q8N0Z6 440 aa20.48■□□□□ 0.87
CPNE6-201ENST00000397016 ZCRB1Q8TBF4 217 aaKnown RBP20.48■□□□□ 0.87
CPNE6-201ENST00000397016 C5P01031 1676 aa20.47■□□□□ 0.87
CPNE6-201ENST00000397016 HSP90AB1P08238 724 aaKnown RBP20.47■□□□□ 0.87
CPNE6-201ENST00000397016 PIP4K2AP48426 406 aaPredicted RBP20.47■□□□□ 0.87
CPNE6-201ENST00000397016 TBC1D9Q6ZT07 1266 aa20.47■□□□□ 0.87
CPNE6-201ENST00000397016 HYPKQ9NX55 129 aa20.47■□□□□ 0.87
CPNE6-201ENST00000397016 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
CPNE6-201ENST00000397016 TTC22Q5TAA0 569 aa20.46■□□□□ 0.87
CPNE6-201ENST00000397016 KSR2Q6VAB6 950 aa20.46■□□□□ 0.87
CPNE6-201ENST00000397016 DDX21Q9NR30 783 aaKnown RBP eCLIP20.46■□□□□ 0.87
CPNE6-201ENST00000397016 PCDH11XQ9BZA7 1347 aa20.46■□□□□ 0.87
CPNE6-201ENST00000397016 PCDH11YQ9BZA8 1340 aa20.46■□□□□ 0.87
CPNE6-201ENST00000397016 MRC1P22897 1456 aa20.46■□□□□ 0.87
CPNE6-201ENST00000397016 IL2RBP14784 551 aa20.46■□□□□ 0.87
CPNE6-201ENST00000397016 DDX54Q8TDD1 881 aaKnown RBP20.46■□□□□ 0.87
CPNE6-201ENST00000397016 CARD10Q9BWT7 1032 aa20.46■□□□□ 0.87
CPNE6-201ENST00000397016 PLEKHG2Q9H7P9 1386 aa20.45■□□□□ 0.86
CPNE6-201ENST00000397016 CWF19L2Q2TBE0 894 aaKnown RBP20.45■□□□□ 0.86
CPNE6-201ENST00000397016 USP16Q9Y5T5 823 aa20.45■□□□□ 0.86
CPNE6-201ENST00000397016 PPP1R42Q7Z4L9 355 aa20.45■□□□□ 0.86
CPNE6-201ENST00000397016 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
CPNE6-201ENST00000397016 TSHZ3Q63HK5 1081 aa20.43■□□□□ 0.86
CPNE6-201ENST00000397016 LRRCC1Q9C099 1032 aa20.43■□□□□ 0.86
CPNE6-201ENST00000397016 SNRPA1P09661 255 aaKnown RBP20.43■□□□□ 0.86
CPNE6-201ENST00000397016 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
CPNE6-201ENST00000397016 BTG4Q9NY30 223 aa20.43■□□□□ 0.86
CPNE6-201ENST00000397016 CDC45O75419 566 aa20.42■□□□□ 0.86
CPNE6-201ENST00000397016 IBTKQ9P2D0 1353 aaPredicted RBP20.42■□□□□ 0.86
CPNE6-201ENST00000397016 SRGAP3O43295 1099 aa20.42■□□□□ 0.86
CPNE6-201ENST00000397016 XAGE3Q8WTP9 111 aa20.42■□□□□ 0.86
CPNE6-201ENST00000397016 DDX58O95786 925 aaKnown RBP20.41■□□□□ 0.86
CPNE6-201ENST00000397016 SSH3Q8TE77 659 aa20.41■□□□□ 0.86
CPNE6-201ENST00000397016 C9orf78Q9NZ63 289 aaPredicted RBP20.41■□□□□ 0.86
CPNE6-201ENST00000397016 RIC3Q7Z5B4 369 aa20.41■□□□□ 0.86
CPNE6-201ENST00000397016 ROBO1Q9Y6N7 1651 aa20.41■□□□□ 0.86
CPNE6-201ENST00000397016 SDSP20132 328 aa20.4■□□□□ 0.86
CPNE6-201ENST00000397016 BECN1Q14457 450 aa20.4■□□□□ 0.86
CPNE6-201ENST00000397016 COPS6Q7L5N1 327 aa20.4■□□□□ 0.86
CPNE6-201ENST00000397016 SURF6O75683 361 aaKnown RBP20.39■□□□□ 0.86
CPNE6-201ENST00000397016 PDE1AP54750 535 aa20.39■□□□□ 0.86
CPNE6-201ENST00000397016 IL1RAPL2Q9NP60 686 aa20.39■□□□□ 0.86
CPNE6-201ENST00000397016 ALDH1L1O75891 902 aa20.38■□□□□ 0.85
CPNE6-201ENST00000397016 POLA2Q14181 598 aa20.38■□□□□ 0.85
CPNE6-201ENST00000397016 TBC1D2Q9BYX2 928 aa20.38■□□□□ 0.85
CPNE6-201ENST00000397016 LINS1Q8NG48 757 aa20.38■□□□□ 0.85
CPNE6-201ENST00000397016 LRP10Q7Z4F1 713 aa20.37■□□□□ 0.85
CPNE6-201ENST00000397016 ERVV-2B6SEH9 535 aa20.36■□□□□ 0.85
CPNE6-201ENST00000397016 PTCD1O75127 700 aaKnown RBP20.36■□□□□ 0.85
CPNE6-201ENST00000397016 IGKV5-2P06315 115 aa20.36■□□□□ 0.85
CPNE6-201ENST00000397016 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
CPNE6-201ENST00000397016 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
CPNE6-201ENST00000397016 SHANK3Q9BYB0 1731 aa20.36■□□□□ 0.85
CPNE6-201ENST00000397016 RBM25P49756 843 aaKnown RBP20.35■□□□□ 0.85
CPNE6-201ENST00000397016 MYD88Q99836 296 aa20.35■□□□□ 0.85
CPNE6-201ENST00000397016 SALL3Q9BXA9 1300 aa20.35■□□□□ 0.85
CPNE6-201ENST00000397016 GLI3P10071 1580 aa20.35■□□□□ 0.85
CPNE6-201ENST00000397016 GRM8O00222 908 aa20.35■□□□□ 0.85
CPNE6-201ENST00000397016 MX1P20591 662 aa20.35■□□□□ 0.85
CPNE6-201ENST00000397016 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
CPNE6-201ENST00000397016 OSBPL3Q9H4L5 887 aa20.34■□□□□ 0.85
CPNE6-201ENST00000397016 NUTM1Q86Y26 1132 aa20.34■□□□□ 0.85
CPNE6-201ENST00000397016 SUCLG2Q96I99 432 aa20.34■□□□□ 0.85
CPNE6-201ENST00000397016 SLKQ9H2G2 1235 aaPredicted RBP20.34■□□□□ 0.85
CPNE6-201ENST00000397016 ANKRD13DQ6ZTN6 518 aa20.33■□□□□ 0.85
CPNE6-201ENST00000397016 SPRYD3Q8NCJ5 442 aa20.33■□□□□ 0.85
CPNE6-201ENST00000397016 NEXNQ0ZGT2 675 aa20.33■□□□□ 0.84
CPNE6-201ENST00000397016 RHPN1Q8TCX5 695 aa20.33■□□□□ 0.84
CPNE6-201ENST00000397016 NEURL1BA8MQ27 555 aa20.32■□□□□ 0.84
CPNE6-201ENST00000397016 KAZALD1Q96I82 304 aa20.32■□□□□ 0.84
CPNE6-201ENST00000397016 OS9Q13438 667 aaPredicted RBP20.31■□□□□ 0.84
CPNE6-201ENST00000397016 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
CPNE6-201ENST00000397016 METTL22Q9BUU2 404 aaPredicted RBP20.31■□□□□ 0.84
CPNE6-201ENST00000397016 BICC1Q9H694 974 aaKnown RBP20.31■□□□□ 0.84
CPNE6-201ENST00000397016 PA2G4Q9UQ80 394 aaKnown RBP20.31■□□□□ 0.84
CPNE6-201ENST00000397016 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
CPNE6-201ENST00000397016 NBPF26B4DH59 902 aa20.31■□□□□ 0.84
CPNE6-201ENST00000397016 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
CPNE6-201ENST00000397016 NBPF14Q5TI25 921 aa20.31■□□□□ 0.84
CPNE6-201ENST00000397016 NBPF10Q6P3W6 841 aaKnown RBP20.31■□□□□ 0.84
CPNE6-201ENST00000397016 NBPF15Q8N660 670 aa20.31■□□□□ 0.84
CPNE6-201ENST00000397016 ADAMTS2O95450 1211 aa20.3■□□□□ 0.84
CPNE6-201ENST00000397016 AHDC1Q5TGY3 1603 aaPredicted RBP20.3■□□□□ 0.84
CPNE6-201ENST00000397016 MTX1Q13505 466 aa20.3■□□□□ 0.84
CPNE6-201ENST00000397016 GCKRQ14397 625 aa20.3■□□□□ 0.84
CPNE6-201ENST00000397016 KIF2CQ99661 725 aa20.3■□□□□ 0.84
CPNE6-201ENST00000397016 KCPQ6ZWJ8 1503 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms