RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 FAM182BQ5T319 152 aa10.08□□□□□ -0.8
NDE1-202ENST00000396355 PHF8Q9UPP1 1060 aa10.08□□□□□ -0.8
NDE1-202ENST00000396355 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.08□□□□□ -0.8
NDE1-202ENST00000396355 LMAN1P49257 510 aa10.08□□□□□ -0.8
NDE1-202ENST00000396355 CCDC125Q86Z20 511 aa10.08□□□□□ -0.8
NDE1-202ENST00000396355 PUS7Q96PZ0 661 aaKnown RBP10.08□□□□□ -0.8
NDE1-202ENST00000396355 KRT27Q7Z3Y8 459 aa10.08□□□□□ -0.8
NDE1-202ENST00000396355 CFAP53Q96M91 514 aa10.08□□□□□ -0.8
NDE1-202ENST00000396355 CENPHQ9H3R5 247 aa10.08□□□□□ -0.8
NDE1-202ENST00000396355 TRIM35Q9UPQ4 493 aa10.08□□□□□ -0.8
NDE1-202ENST00000396355 PIK3R4Q99570 1358 aa10.08□□□□□ -0.8
NDE1-202ENST00000396355 RIOK3O14730 519 aaKnown RBP10.07□□□□□ -0.8
NDE1-202ENST00000396355 PPP2R5AQ15172 486 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 FBXW7Q969H0 707 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 ARHGAP23Q9P227 1491 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 KIF20BQ96Q89 1820 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 MINK1Q8N4C8 1332 aaPredicted RBP10.07□□□□□ -0.8
NDE1-202ENST00000396355 FYB1O15117 783 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 PHF14O94880 888 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 ARID4AP29374 1257 aaPredicted RBP10.07□□□□□ -0.8
NDE1-202ENST00000396355 UNC5CLQ8IV45 518 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 RBSNQ9H1K0 784 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 METP08581 1390 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 NRDCO43847 1150 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 TERF1P54274 439 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 KRBA2Q6ZNG9 492 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 ITPRIPQ8IWB1 547 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 PRAM1Q96QH2 718 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 KCNG1Q9UIX4 513 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
NDE1-202ENST00000396355 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
NDE1-202ENST00000396355 PRR29P0C7W0 189 aa10.06□□□□□ -0.8
NDE1-202ENST00000396355 SETD1AO15047 1707 aaKnown RBP10.06□□□□□ -0.8
NDE1-202ENST00000396355 SLIT1O75093 1534 aa10.06□□□□□ -0.8
NDE1-202ENST00000396355 NEK11Q8NG66 645 aa10.06□□□□□ -0.8
NDE1-202ENST00000396355 ROBO1Q9Y6N7 1651 aa10.06□□□□□ -0.8
NDE1-202ENST00000396355 FBLN1P23142 703 aa10.06□□□□□ -0.8
NDE1-202ENST00000396355 ZSCAN23Q3MJ62 389 aa10.06□□□□□ -0.8
NDE1-202ENST00000396355 MNS1Q8NEH6 495 aa10.06□□□□□ -0.8
NDE1-202ENST00000396355 ZC3H6P61129 1189 aaKnown RBP10.05□□□□□ -0.8
NDE1-202ENST00000396355 LNPKQ9C0E8 428 aa10.05□□□□□ -0.8
NDE1-202ENST00000396355 SMC4Q9NTJ3 1288 aa10.05□□□□□ -0.8
NDE1-202ENST00000396355 CSB-PGBD3P0DP91 1061 aa10.05□□□□□ -0.8
NDE1-202ENST00000396355 NBPF14Q5TI25 921 aa10.05□□□□□ -0.8
NDE1-202ENST00000396355 BTG4Q9NY30 223 aa10.05□□□□□ -0.8
NDE1-202ENST00000396355 R3HDM1Q15032 1099 aaKnown RBP10.05□□□□□ -0.8
NDE1-202ENST00000396355 DNAAF4Q8WXU2 420 aa10.05□□□□□ -0.8
NDE1-202ENST00000396355 AK7Q96M32 723 aa10.05□□□□□ -0.8
NDE1-202ENST00000396355 TMPOP42166 694 aaKnown RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 SARNPP82979 210 aaKnown RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 TTC31Q49AM3 519 aaPredicted RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 TICAM2Q86XR7 235 aa10.04□□□□□ -0.8
NDE1-202ENST00000396355 ARGLU1Q9NWB6 273 aaPredicted RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 EXOSC9Q06265 439 aaKnown RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 DHX8Q14562 1220 aaKnown RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 MVPQ14764 893 aaKnown RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 FEZ1Q99689 392 aa10.04□□□□□ -0.8
NDE1-202ENST00000396355 TRIM5Q9C035 493 aa10.04□□□□□ -0.8
NDE1-202ENST00000396355 TRIM27P14373 513 aa10.04□□□□□ -0.8
NDE1-202ENST00000396355 EN1Q05925 392 aaPredicted RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 TRMT1Q9NXH9 659 aaKnown RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 LRRFIP2Q9Y608 721 aaKnown RBP10.04□□□□□ -0.8
NDE1-202ENST00000396355 GDPD2Q9HCC8 539 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 KIF16BQ96L93 1317 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 PHLPP1O60346 1717 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 APBA3O96018 575 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 SSR1P43307 286 aaKnown RBP10.03□□□□□ -0.8
NDE1-202ENST00000396355 TPM4P67936 248 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 FAM177A1Q8N128 213 aaPredicted RBP10.03□□□□□ -0.8
NDE1-202ENST00000396355 PRPF38AQ8NAV1 312 aaKnown RBP10.03□□□□□ -0.8
NDE1-202ENST00000396355 PNPLA6Q8IY17 1366 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 MAP2P11137 1827 aaKnown RBP10.03□□□□□ -0.8
NDE1-202ENST00000396355 ADCY5O95622 1261 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 PDE6BP35913 854 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 HNRNPH2P55795 449 aaKnown RBP10.03□□□□□ -0.8
NDE1-202ENST00000396355 NUCB2P80303 420 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 LRCH2Q5VUJ6 765 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 SSH1Q8WYL5 1049 aa10.03□□□□□ -0.8
NDE1-202ENST00000396355 MCM5P33992 734 aa10.02□□□□□ -0.8
NDE1-202ENST00000396355 GABPB1Q06547 395 aaPredicted RBP10.02□□□□□ -0.8
NDE1-202ENST00000396355 BIRC2Q13490 618 aa10.02□□□□□ -0.8
NDE1-202ENST00000396355 ANKRD20A12PQ8NF67 263 aa10.02□□□□□ -0.8
NDE1-202ENST00000396355 CDC42BPGQ6DT37 1551 aa10.02□□□□□ -0.8
NDE1-202ENST00000396355 ANKRD65E5RJM6 399 aa10.02□□□□□ -0.81
NDE1-202ENST00000396355 GYS2P54840 703 aa10.02□□□□□ -0.81
NDE1-202ENST00000396355 ADGRL3Q9HAR2 1447 aa10.02□□□□□ -0.81
NDE1-202ENST00000396355 CHRNA2Q15822 529 aa10.02□□□□□ -0.81
NDE1-202ENST00000396355 CASC1Q6TDU7 716 aa10.02□□□□□ -0.81
NDE1-202ENST00000396355 NCOA3Q9Y6Q9 1424 aa10.02□□□□□ -0.81
NDE1-202ENST00000396355 BAG4O95429 457 aaKnown RBP10.01□□□□□ -0.81
NDE1-202ENST00000396355 CABP1Q9NZU7 370 aa10.01□□□□□ -0.81
NDE1-202ENST00000396355 NRXN3Q9Y4C0 1643 aa10.01□□□□□ -0.81
NDE1-202ENST00000396355 ANKRD45Q5TZF3 282 aa10.01□□□□□ -0.81
NDE1-202ENST00000396355 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
NDE1-202ENST00000396355 DZIP1LQ8IYY4 767 aaKnown RBP10.01□□□□□ -0.81
NDE1-202ENST00000396355 CCDC91Q7Z6B0 441 aa10.01□□□□□ -0.81
NDE1-202ENST00000396355 RPAINQ86UA6 219 aa10.01□□□□□ -0.81
NDE1-202ENST00000396355 MICALL1Q8N3F8 863 aa10.01□□□□□ -0.81
NDE1-202ENST00000396355 CDK19Q9BWU1 502 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms