RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 LMOD3Q0VAK6 560 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 POLKQ9UBT6 870 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 STAG3Q9UJ98 1225 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 ATP6V1DQ9Y5K8 247 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 MAP2P11137 1827 aaKnown RBP7.56□□□□□ -1.2
NXF3-201ENST00000395065 PTPRCP08575 1304 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 HMMRO75330 724 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 F13A1P00488 732 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 HOXD11P31277 338 aaPredicted RBP7.55□□□□□ -1.2
NXF3-201ENST00000395065 HSPA4P34932 840 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 GIMAP6Q6P9H5 292 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 KRT222Q8N1A0 295 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 TTC14Q96N46 770 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 RIMS2Q9UQ26 1411 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 SPATA31D1Q6ZQQ2 1576 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 A2ML1A8K2U0 1454 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 NRXN3Q9Y4C0 1643 aa7.55□□□□□ -1.2
NXF3-201ENST00000395065 STX6O43752 255 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 CCDC192P0DO97 292 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 SYT1P21579 422 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 IL13P35225 146 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.54□□□□□ -1.2
NXF3-201ENST00000395065 MEIS3Q99687 375 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 CDK19Q9BWU1 502 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 STAP2Q9UGK3 403 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 MSH6P52701 1360 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 TNNT1P13805 278 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 PTGS1P23219 599 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 FOXD4L6Q3SYB3 417 aaPredicted RBP7.54□□□□□ -1.2
NXF3-201ENST00000395065 SLFNL1Q499Z3 407 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 FOXD4L3Q6VB84 417 aaPredicted RBP7.54□□□□□ -1.2
NXF3-201ENST00000395065 PLA2G4DQ86XP0 818 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 SPC24Q8NBT2 197 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 TIGD1Q96MW7 591 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 CABP1Q9NZU7 370 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.54□□□□□ -1.2
NXF3-201ENST00000395065 AGLP35573 1532 aa7.54□□□□□ -1.2
NXF3-201ENST00000395065 CDK12Q9NYV4 1490 aaPredicted RBP7.53□□□□□ -1.2
NXF3-201ENST00000395065 RIMS1Q86UR5 1692 aaKnown RBP7.53□□□□□ -1.2
NXF3-201ENST00000395065 DLC1Q96QB1 1528 aa7.53□□□□□ -1.2
NXF3-201ENST00000395065 CEBPAP49715 358 aaPredicted RBP7.53□□□□□ -1.2
NXF3-201ENST00000395065 NAA30Q147X3 362 aaPredicted RBP7.53□□□□□ -1.2
NXF3-201ENST00000395065 RBM43Q6ZSC3 357 aaKnown RBP7.53□□□□□ -1.2
NXF3-201ENST00000395065 CCDC186Q7Z3E2 898 aa7.53□□□□□ -1.2
NXF3-201ENST00000395065 HDGFL2Q7Z4V5 671 aaPredicted RBP7.53□□□□□ -1.2
NXF3-201ENST00000395065 WAPLQ7Z5K2 1190 aa7.53□□□□□ -1.2
NXF3-201ENST00000395065 CCDC112Q8NEF3 446 aa7.53□□□□□ -1.2
NXF3-201ENST00000395065 ZNF397Q8NF99 534 aaPredicted RBP7.53□□□□□ -1.2
NXF3-201ENST00000395065 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
NXF3-201ENST00000395065 UPF3BQ9BZI7 483 aaKnown RBP7.53□□□□□ -1.2
NXF3-201ENST00000395065 ANO2Q9NQ90 1003 aa7.53□□□□□ -1.2
NXF3-201ENST00000395065 CALCOCO1Q9P1Z2 691 aa7.53□□□□□ -1.2
NXF3-201ENST00000395065 AOX1Q06278 1338 aa7.53□□□□□ -1.2
NXF3-201ENST00000395065 HMOX1P09601 288 aa7.52□□□□□ -1.2
NXF3-201ENST00000395065 FBLN1P23142 703 aa7.52□□□□□ -1.2
NXF3-201ENST00000395065 KCNJ4P48050 445 aa7.52□□□□□ -1.2
NXF3-201ENST00000395065 RBM6P78332 1123 aaKnown RBP7.52□□□□□ -1.2
NXF3-201ENST00000395065 KRT24Q2M2I5 525 aa7.52□□□□□ -1.2
NXF3-201ENST00000395065 KMT5BQ4FZB7 885 aa7.52□□□□□ -1.2
NXF3-201ENST00000395065 ZSCAN25Q6NSZ9 544 aa7.52□□□□□ -1.2
NXF3-201ENST00000395065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.52□□□□□ -1.2
NXF3-201ENST00000395065 KIF1BPQ96EK5 621 aa7.52□□□□□ -1.2
NXF3-201ENST00000395065 MRVI1Q9Y6F6 885 aa7.52□□□□□ -1.2
NXF3-201ENST00000395065 ELP1O95163 1332 aa7.52□□□□□ -1.21
NXF3-201ENST00000395065 CCDC171Q6TFL3 1326 aa7.52□□□□□ -1.21
NXF3-201ENST00000395065 CHL1O00533 1208 aa7.52□□□□□ -1.21
NXF3-201ENST00000395065 PDIA4P13667 645 aaKnown RBP7.52□□□□□ -1.21
NXF3-201ENST00000395065 CDC25BP30305 580 aa7.52□□□□□ -1.21
NXF3-201ENST00000395065 LRMPQ12912 555 aa7.52□□□□□ -1.21
NXF3-201ENST00000395065 NOL8Q76FK4 1167 aaKnown RBP7.52□□□□□ -1.21
NXF3-201ENST00000395065 C16orf45Q96MC5 204 aaPredicted RBP7.52□□□□□ -1.21
NXF3-201ENST00000395065 KCND1Q9NSA2 647 aa7.52□□□□□ -1.21
NXF3-201ENST00000395065 LIMCH1Q9UPQ0 1083 aa7.52□□□□□ -1.21
NXF3-201ENST00000395065 MTMR6Q9Y217 621 aa7.52□□□□□ -1.21
NXF3-201ENST00000395065 ATP7BP35670 1465 aa7.52□□□□□ -1.21
NXF3-201ENST00000395065 ITSN1Q15811 1721 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 AATKQ6ZMQ8 1374 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 APBB1O00213 710 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 FIBPO43427 364 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 ZNF75DP51815 510 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 DNM1Q05193 864 aaKnown RBP7.51□□□□□ -1.21
NXF3-201ENST00000395065 NYAP1Q6ZVC0 841 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 TDRD7Q8NHU6 1098 aaKnown RBP7.51□□□□□ -1.21
NXF3-201ENST00000395065 LRRCC1Q9C099 1032 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 BCL11BQ9C0K0 894 aaPredicted RBP7.51□□□□□ -1.21
NXF3-201ENST00000395065 IL25Q9H293 177 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 MON2Q7Z3U7 1717 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 RAD50Q92878 1312 aa7.51□□□□□ -1.21
NXF3-201ENST00000395065 CAPN2P17655 700 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 CYP2C19P33261 490 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 VASPP50552 380 aaPredicted RBP7.5□□□□□ -1.21
NXF3-201ENST00000395065 AK2P54819 239 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 TYRO3Q06418 890 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 MAP3K11Q16584 847 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 CEP135Q66GS9 1140 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 RUFY3Q7L099 469 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 AEBP1Q8IUX7 1158 aa7.5□□□□□ -1.21
NXF3-201ENST00000395065 CACTINQ8WUQ7 758 aaKnown RBP7.5□□□□□ -1.21
NXF3-201ENST00000395065 ERO1AQ96HE7 468 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms