RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
CASP3-202ENST00000393585 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
CASP3-202ENST00000393585 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
CASP3-202ENST00000393585 BEND3Q5T5X7 828 aa13.65□□□□□ -0.22
CASP3-202ENST00000393585 ZNF496Q96IT1 587 aaPredicted RBP13.64□□□□□ -0.23
CASP3-202ENST00000393585 NBPF7P0C2Y1 421 aaPredicted RBP13.64□□□□□ -0.23
CASP3-202ENST00000393585 C22orf23Q9BZE7 217 aa13.64□□□□□ -0.23
CASP3-202ENST00000393585 C5P01031 1676 aa13.64□□□□□ -0.23
CASP3-202ENST00000393585 ATP8B2P98198 1209 aa13.63□□□□□ -0.23
CASP3-202ENST00000393585 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
CASP3-202ENST00000393585 LARP1Q6PKG0 1096 aaKnown RBP13.63□□□□□ -0.23
CASP3-202ENST00000393585 MAP3K2Q9Y2U5 619 aa13.63□□□□□ -0.23
CASP3-202ENST00000393585 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
CASP3-202ENST00000393585 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
CASP3-202ENST00000393585 ZCRB1Q8TBF4 217 aaKnown RBP13.62□□□□□ -0.23
CASP3-202ENST00000393585 USP35Q9P2H5 1018 aa13.62□□□□□ -0.23
CASP3-202ENST00000393585 MYL6BP14649 208 aa13.62□□□□□ -0.23
CASP3-202ENST00000393585 CABP4P57796 275 aa13.62□□□□□ -0.23
CASP3-202ENST00000393585 EVA1CP58658 441 aa13.62□□□□□ -0.23
CASP3-202ENST00000393585 PDIA6Q15084 440 aa13.62□□□□□ -0.23
CASP3-202ENST00000393585 TTC22Q5TAA0 569 aa13.62□□□□□ -0.23
CASP3-202ENST00000393585 MRC1P22897 1456 aa13.62□□□□□ -0.23
CASP3-202ENST00000393585 HSP90AB1P08238 724 aaKnown RBP13.61□□□□□ -0.23
CASP3-202ENST00000393585 PIP4K2AP48426 406 aaPredicted RBP13.61□□□□□ -0.23
CASP3-202ENST00000393585 DDX21Q9NR30 783 aaKnown RBP eCLIP13.61□□□□□ -0.23
CASP3-202ENST00000393585 PLEKHG2Q9H7P9 1386 aa13.61□□□□□ -0.23
CASP3-202ENST00000393585 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
CASP3-202ENST00000393585 ZBTB22O15209 634 aa13.61□□□□□ -0.23
CASP3-202ENST00000393585 KSR2Q6VAB6 950 aa13.61□□□□□ -0.23
CASP3-202ENST00000393585 HYPKQ9NX55 129 aa13.61□□□□□ -0.23
CASP3-202ENST00000393585 USP16Q9Y5T5 823 aa13.61□□□□□ -0.23
CASP3-202ENST00000393585 PCDH11XQ9BZA7 1347 aa13.61□□□□□ -0.23
CASP3-202ENST00000393585 PCDH11YQ9BZA8 1340 aa13.61□□□□□ -0.23
CASP3-202ENST00000393585 IL2RBP14784 551 aa13.6□□□□□ -0.23
CASP3-202ENST00000393585 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CASP3-202ENST00000393585 CWF19L2Q2TBE0 894 aaKnown RBP13.6□□□□□ -0.23
CASP3-202ENST00000393585 DDX54Q8TDD1 881 aaKnown RBP13.6□□□□□ -0.23
CASP3-202ENST00000393585 CARD10Q9BWT7 1032 aa13.6□□□□□ -0.23
CASP3-202ENST00000393585 PPP1R42Q7Z4L9 355 aa13.6□□□□□ -0.23
CASP3-202ENST00000393585 TSHZ3Q63HK5 1081 aa13.59□□□□□ -0.23
CASP3-202ENST00000393585 LRRCC1Q9C099 1032 aa13.59□□□□□ -0.23
CASP3-202ENST00000393585 CDC45O75419 566 aa13.59□□□□□ -0.23
CASP3-202ENST00000393585 SNRPA1P09661 255 aaKnown RBP13.59□□□□□ -0.23
CASP3-202ENST00000393585 SSH3Q8TE77 659 aa13.59□□□□□ -0.23
CASP3-202ENST00000393585 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
CASP3-202ENST00000393585 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.23
CASP3-202ENST00000393585 SRGAP3O43295 1099 aa13.58□□□□□ -0.24
CASP3-202ENST00000393585 BTG4Q9NY30 223 aa13.58□□□□□ -0.24
CASP3-202ENST00000393585 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
CASP3-202ENST00000393585 ROBO1Q9Y6N7 1651 aa13.58□□□□□ -0.24
CASP3-202ENST00000393585 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.24
CASP3-202ENST00000393585 BECN1Q14457 450 aa13.58□□□□□ -0.24
CASP3-202ENST00000393585 XAGE3Q8WTP9 111 aa13.58□□□□□ -0.24
CASP3-202ENST00000393585 SDSP20132 328 aa13.57□□□□□ -0.24
CASP3-202ENST00000393585 PDE1AP54750 535 aa13.57□□□□□ -0.24
CASP3-202ENST00000393585 COPS6Q7L5N1 327 aa13.57□□□□□ -0.24
CASP3-202ENST00000393585 RIC3Q7Z5B4 369 aa13.57□□□□□ -0.24
CASP3-202ENST00000393585 IL1RAPL2Q9NP60 686 aa13.57□□□□□ -0.24
CASP3-202ENST00000393585 SURF6O75683 361 aaKnown RBP13.57□□□□□ -0.24
CASP3-202ENST00000393585 TBC1D2Q9BYX2 928 aa13.57□□□□□ -0.24
CASP3-202ENST00000393585 ALDH1L1O75891 902 aa13.56□□□□□ -0.24
CASP3-202ENST00000393585 POLA2Q14181 598 aa13.56□□□□□ -0.24
CASP3-202ENST00000393585 LINS1Q8NG48 757 aa13.56□□□□□ -0.24
CASP3-202ENST00000393585 SHANK3Q9BYB0 1731 aa13.56□□□□□ -0.24
CASP3-202ENST00000393585 SALL3Q9BXA9 1300 aa13.55□□□□□ -0.24
CASP3-202ENST00000393585 IGKV5-2P06315 115 aa13.55□□□□□ -0.24
CASP3-202ENST00000393585 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
CASP3-202ENST00000393585 GLI3P10071 1580 aa13.55□□□□□ -0.24
CASP3-202ENST00000393585 LRP10Q7Z4F1 713 aa13.55□□□□□ -0.24
CASP3-202ENST00000393585 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
CASP3-202ENST00000393585 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
CASP3-202ENST00000393585 MX1P20591 662 aa13.54□□□□□ -0.24
CASP3-202ENST00000393585 SLKQ9H2G2 1235 aaPredicted RBP13.54□□□□□ -0.24
CASP3-202ENST00000393585 OSBPL3Q9H4L5 887 aa13.54□□□□□ -0.24
CASP3-202ENST00000393585 ERVV-2B6SEH9 535 aa13.54□□□□□ -0.24
CASP3-202ENST00000393585 GRM8O00222 908 aa13.54□□□□□ -0.24
CASP3-202ENST00000393585 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
CASP3-202ENST00000393585 MYD88Q99836 296 aa13.54□□□□□ -0.24
CASP3-202ENST00000393585 SUCLG2Q96I99 432 aa13.53□□□□□ -0.24
CASP3-202ENST00000393585 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
CASP3-202ENST00000393585 NUTM1Q86Y26 1132 aa13.53□□□□□ -0.24
CASP3-202ENST00000393585 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
CASP3-202ENST00000393585 RHPN1Q8TCX5 695 aa13.53□□□□□ -0.24
CASP3-202ENST00000393585 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.24
CASP3-202ENST00000393585 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.25
CASP3-202ENST00000393585 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
CASP3-202ENST00000393585 PA2G4Q9UQ80 394 aaKnown RBP13.52□□□□□ -0.25
CASP3-202ENST00000393585 RAB11FIP3O75154 756 aa13.51□□□□□ -0.25
CASP3-202ENST00000393585 KIF2CQ99661 725 aa13.51□□□□□ -0.25
CASP3-202ENST00000393585 METTL22Q9BUU2 404 aaPredicted RBP13.51□□□□□ -0.25
CASP3-202ENST00000393585 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
CASP3-202ENST00000393585 LAMB4A4D0S4 1761 aa13.51□□□□□ -0.25
CASP3-202ENST00000393585 NBPF26B4DH59 902 aa13.51□□□□□ -0.25
CASP3-202ENST00000393585 OS9Q13438 667 aaPredicted RBP13.51□□□□□ -0.25
CASP3-202ENST00000393585 MTX1Q13505 466 aa13.51□□□□□ -0.25
CASP3-202ENST00000393585 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
CASP3-202ENST00000393585 NBPF14Q5TI25 921 aa13.51□□□□□ -0.25
CASP3-202ENST00000393585 NBPF10Q6P3W6 841 aaKnown RBP13.51□□□□□ -0.25
CASP3-202ENST00000393585 NBPF15Q8N660 670 aa13.51□□□□□ -0.25
CASP3-202ENST00000393585 JARID2Q92833 1246 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms