RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 ERCC4Q92889 916 aaPredicted RBP17.66■□□□□ 0.42
TUSC3-201ENST00000382020 SDF4Q9BRK5 362 aa17.66■□□□□ 0.42
TUSC3-201ENST00000382020 ZDHHC9Q9Y397 364 aa17.66■□□□□ 0.42
TUSC3-201ENST00000382020 HOMER1Q86YM7 354 aa17.66■□□□□ 0.42
TUSC3-201ENST00000382020 A0A087WWV3 80 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 KRT85P78386 507 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 RHPN1Q8TCX5 695 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 LIMCH1Q9UPQ0 1083 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 ARHGEF5Q12774 1597 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 LETM1O95202 739 aaPredicted RBP17.65■□□□□ 0.42
TUSC3-201ENST00000382020 PTGS1P23219 599 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 CCDC112Q8NEF3 446 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 TOMM22Q9NS69 142 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 CCDC186Q7Z3E2 898 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
TUSC3-201ENST00000382020 GTPBP4Q9BZE4 634 aaKnown RBP17.65■□□□□ 0.42
TUSC3-201ENST00000382020 TMX1Q9H3N1 280 aa17.64■□□□□ 0.41
TUSC3-201ENST00000382020 NPATQ14207 1427 aa17.64■□□□□ 0.41
TUSC3-201ENST00000382020 ABCC4O15439 1325 aa17.64■□□□□ 0.41
TUSC3-201ENST00000382020 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
TUSC3-201ENST00000382020 ATP2B1P20020 1258 aa17.63■□□□□ 0.41
TUSC3-201ENST00000382020 BLOC1S2Q6QNY1 142 aa17.63■□□□□ 0.41
TUSC3-201ENST00000382020 NLRP1Q9C000 1473 aa17.63■□□□□ 0.41
TUSC3-201ENST00000382020 CCT2P78371 535 aaKnown RBP17.63■□□□□ 0.41
TUSC3-201ENST00000382020 ZNF530Q6P9A1 599 aaPredicted RBP17.63■□□□□ 0.41
TUSC3-201ENST00000382020 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
TUSC3-201ENST00000382020 ZFP91Q96JP5 570 aaPredicted RBP17.63■□□□□ 0.41
TUSC3-201ENST00000382020 CHPF2Q9P2E5 772 aa17.63■□□□□ 0.41
TUSC3-201ENST00000382020 EID1Q9Y6B2 187 aa17.63■□□□□ 0.41
TUSC3-201ENST00000382020 ZSCAN20P17040 1043 aaPredicted RBP17.62■□□□□ 0.41
TUSC3-201ENST00000382020 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.62■□□□□ 0.41
TUSC3-201ENST00000382020 MAP3K11Q16584 847 aa17.62■□□□□ 0.41
TUSC3-201ENST00000382020 CWF19L2Q2TBE0 894 aaKnown RBP17.62■□□□□ 0.41
TUSC3-201ENST00000382020 DACT1Q9NYF0 836 aa17.62■□□□□ 0.41
TUSC3-201ENST00000382020 BIN1O00499 593 aa17.62■□□□□ 0.41
TUSC3-201ENST00000382020 NBPF7P0C2Y1 421 aaPredicted RBP17.62■□□□□ 0.41
TUSC3-201ENST00000382020 SMC2O95347 1197 aa17.61■□□□□ 0.41
TUSC3-201ENST00000382020 KIF1BPQ96EK5 621 aa17.61■□□□□ 0.41
TUSC3-201ENST00000382020 EDC3Q96F86 508 aaKnown RBP17.61■□□□□ 0.41
TUSC3-201ENST00000382020 RIMS2Q9UQ26 1411 aa17.61■□□□□ 0.41
TUSC3-201ENST00000382020 CLTCL1P53675 1640 aa17.61■□□□□ 0.41
TUSC3-201ENST00000382020 TNNT1P13805 278 aa17.61■□□□□ 0.41
TUSC3-201ENST00000382020 ME1P48163 572 aa17.61■□□□□ 0.41
TUSC3-201ENST00000382020 HSP90AA4PQ58FG1 418 aa17.61■□□□□ 0.41
TUSC3-201ENST00000382020 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
TUSC3-201ENST00000382020 PIBF1Q8WXW3 757 aa17.61■□□□□ 0.41
TUSC3-201ENST00000382020 CROCC2H7BZ55 1655 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 RTL1A6NKG5 1358 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 PSME1Q06323 249 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 CCDC66A2RUB6 948 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 DNAJC25Q9H1X3 360 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 ASXL2Q76L83 1435 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 LRMPQ12912 555 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 RNF20Q5VTR2 975 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 CCDC73Q6ZRK6 1079 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 CHST3Q7LGC8 479 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 CHMP4CQ96CF2 233 aa17.6■□□□□ 0.41
TUSC3-201ENST00000382020 PTPRCP08575 1304 aa17.59■□□□□ 0.41
TUSC3-201ENST00000382020 TULP1O00294 542 aaPredicted RBP17.59■□□□□ 0.41
TUSC3-201ENST00000382020 KIF20AO95235 890 aa17.59■□□□□ 0.41
TUSC3-201ENST00000382020 EYA1Q99502 592 aa17.59■□□□□ 0.41
TUSC3-201ENST00000382020 ANO6Q4KMQ2 910 aa17.59■□□□□ 0.41
TUSC3-201ENST00000382020 F13A1P00488 732 aa17.59■□□□□ 0.41
TUSC3-201ENST00000382020 SKIDA1Q1XH10 827 aa17.59■□□□□ 0.41
TUSC3-201ENST00000382020 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.41
TUSC3-201ENST00000382020 BTBD11A6QL63 1104 aa17.58■□□□□ 0.41
TUSC3-201ENST00000382020 NRDCO43847 1150 aa17.58■□□□□ 0.41
TUSC3-201ENST00000382020 BRD1O95696 1058 aa17.58■□□□□ 0.41
TUSC3-201ENST00000382020 UBE2HP62256 183 aa17.58■□□□□ 0.41
TUSC3-201ENST00000382020 ATP8B2P98198 1209 aa17.58■□□□□ 0.4
TUSC3-201ENST00000382020 CHL1O00533 1208 aa17.58■□□□□ 0.4
TUSC3-201ENST00000382020 NEXNQ0ZGT2 675 aa17.58■□□□□ 0.4
TUSC3-201ENST00000382020 NAA30Q147X3 362 aaPredicted RBP17.58■□□□□ 0.4
TUSC3-201ENST00000382020 TTLL5Q6EMB2 1281 aa17.58■□□□□ 0.4
TUSC3-201ENST00000382020 MAP3K19Q56UN5 1328 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 TTC21BQ7Z4L5 1316 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 PDLIM2Q96JY6 352 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 ATP7AQ04656 1500 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
TUSC3-201ENST00000382020 HTATSF1O43719 755 aaKnown RBP17.57■□□□□ 0.4
TUSC3-201ENST00000382020 APPP05067 770 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 FAM227BQ96M60 508 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 PYCARDQ9ULZ3 195 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 ZNF165P49910 485 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 DNAAF4Q8WXU2 420 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 LRRC59Q96AG4 307 aaKnown RBP17.57■□□□□ 0.4
TUSC3-201ENST00000382020 NLRP2Q9NX02 1062 aa17.57■□□□□ 0.4
TUSC3-201ENST00000382020 E9PCH4 1651 aa17.56■□□□□ 0.4
TUSC3-201ENST00000382020 LARGE1O95461 756 aa17.56■□□□□ 0.4
TUSC3-201ENST00000382020 TAF7LQ5H9L4 462 aa17.56■□□□□ 0.4
TUSC3-201ENST00000382020 CERS3Q8IU89 383 aa17.56■□□□□ 0.4
TUSC3-201ENST00000382020 SNX14Q9Y5W7 946 aa17.56■□□□□ 0.4
TUSC3-201ENST00000382020 POLR3GO15318 223 aaPredicted RBP17.56■□□□□ 0.4
TUSC3-201ENST00000382020 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
TUSC3-201ENST00000382020 RBM8AQ9Y5S9 174 aaKnown RBP17.56■□□□□ 0.4
TUSC3-201ENST00000382020 KCNQ3O43525 872 aa17.56■□□□□ 0.4
TUSC3-201ENST00000382020 KINO60870 393 aaKnown RBP17.56■□□□□ 0.4
TUSC3-201ENST00000382020 ADCK5Q3MIX3 580 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms