RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 FSTL1Q12841 308 aa21.65■■□□□ 1.06
VCX3A-201ENST00000381089 SLC39A6Q13433 755 aa21.65■■□□□ 1.06
VCX3A-201ENST00000381089 VSIG10Q8N0Z9 540 aa21.65■■□□□ 1.06
VCX3A-201ENST00000381089 ADAMTS7Q9UKP4 1686 aa21.64■■□□□ 1.05
VCX3A-201ENST00000381089 DIAPH1O60610 1272 aaKnown RBP21.64■■□□□ 1.05
VCX3A-201ENST00000381089 KCPQ6ZWJ8 1503 aa21.64■■□□□ 1.05
VCX3A-201ENST00000381089 ZC3H4Q9UPT8 1303 aaKnown RBP21.63■■□□□ 1.05
VCX3A-201ENST00000381089 NFIXQ14938 502 aa21.63■■□□□ 1.05
VCX3A-201ENST00000381089 TTC5Q8N0Z6 440 aa21.63■■□□□ 1.05
VCX3A-201ENST00000381089 ZBTB1Q9Y2K1 713 aa21.63■■□□□ 1.05
VCX3A-201ENST00000381089 MTHFSDQ2M296 383 aaKnown RBP21.62■■□□□ 1.05
VCX3A-201ENST00000381089 DNAJC5GQ8N7S2 189 aa21.62■■□□□ 1.05
VCX3A-201ENST00000381089 VIRMAQ69YN4 1812 aaKnown RBP21.62■■□□□ 1.05
VCX3A-201ENST00000381089 TNRC6CQ9HCJ0 1690 aaKnown RBP21.61■■□□□ 1.05
VCX3A-201ENST00000381089 STARD3NLO95772 234 aa21.61■■□□□ 1.05
VCX3A-201ENST00000381089 WDR90Q96KV7 1748 aa21.6■■□□□ 1.05
VCX3A-201ENST00000381089 A0A087WZG4 1122 aa21.6■■□□□ 1.05
VCX3A-201ENST00000381089 SERPINB2P05120 415 aa21.6■■□□□ 1.05
VCX3A-201ENST00000381089 RRAGCQ9HB90 399 aa21.6■■□□□ 1.05
VCX3A-201ENST00000381089 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
VCX3A-201ENST00000381089 SBF1O95248 1867 aa21.59■■□□□ 1.05
VCX3A-201ENST00000381089 CANXP27824 592 aaKnown RBP21.59■■□□□ 1.05
VCX3A-201ENST00000381089 TTLL6Q8N841 843 aa21.59■■□□□ 1.05
VCX3A-201ENST00000381089 AFDNP55196 1824 aaKnown RBP21.59■■□□□ 1.05
VCX3A-201ENST00000381089 H0YIN7 160 aa21.58■■□□□ 1.05
VCX3A-201ENST00000381089 LMNB1P20700 586 aa21.58■■□□□ 1.05
VCX3A-201ENST00000381089 SMC1BQ8NDV3 1235 aa21.58■■□□□ 1.05
VCX3A-201ENST00000381089 NRXN2Q9P2S2 1712 aa21.58■■□□□ 1.04
VCX3A-201ENST00000381089 RASSF7Q02833 373 aa21.57■■□□□ 1.04
VCX3A-201ENST00000381089 CC2D1BQ5T0F9 858 aaKnown RBP21.57■■□□□ 1.04
VCX3A-201ENST00000381089 C2CD5Q86YS7 1000 aa21.57■■□□□ 1.04
VCX3A-201ENST00000381089 TEFQ10587 303 aa21.56■■□□□ 1.04
VCX3A-201ENST00000381089 NPM2Q86SE8 214 aaKnown RBP21.56■■□□□ 1.04
VCX3A-201ENST00000381089 KLRG1Q96E93 195 aa21.56■■□□□ 1.04
VCX3A-201ENST00000381089 TEX13AQ9BXU3 409 aaPredicted RBP21.56■■□□□ 1.04
VCX3A-201ENST00000381089 PDZRN3Q9UPQ7 1066 aa21.56■■□□□ 1.04
VCX3A-201ENST00000381089 GAS2L2Q8NHY3 880 aa21.55■■□□□ 1.04
VCX3A-201ENST00000381089 BCL2L12Q9HB09 334 aa21.55■■□□□ 1.04
VCX3A-201ENST00000381089 UBR2Q8IWV8 1755 aa21.55■■□□□ 1.04
VCX3A-201ENST00000381089 DLEC1Q9Y238 1755 aa21.55■■□□□ 1.04
VCX3A-201ENST00000381089 EIF5P55010 431 aaKnown RBP21.54■■□□□ 1.04
VCX3A-201ENST00000381089 BICDL1Q6ZP65 573 aa21.54■■□□□ 1.04
VCX3A-201ENST00000381089 GLTPD2A6NH11 291 aa21.53■■□□□ 1.04
VCX3A-201ENST00000381089 GNAT3A8MTJ3 354 aa21.53■■□□□ 1.04
VCX3A-201ENST00000381089 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
VCX3A-201ENST00000381089 VEGFAP15692 232 aaPredicted RBP21.53■■□□□ 1.04
VCX3A-201ENST00000381089 PER1O15534 1290 aaPredicted RBP21.52■■□□□ 1.04
VCX3A-201ENST00000381089 PDE6BP35913 854 aa21.52■■□□□ 1.04
VCX3A-201ENST00000381089 ZNF790Q6PG37 636 aa21.52■■□□□ 1.04
VCX3A-201ENST00000381089 ZNF330Q9Y3S2 320 aaPredicted RBP21.52■■□□□ 1.04
VCX3A-201ENST00000381089 HEG1Q9ULI3 1381 aa21.51■■□□□ 1.03
VCX3A-201ENST00000381089 HTRA3P83110 453 aa21.51■■□□□ 1.03
VCX3A-201ENST00000381089 NPHP1O15259 732 aa21.5■■□□□ 1.03
VCX3A-201ENST00000381089 JMYQ8N9B5 988 aa21.5■■□□□ 1.03
VCX3A-201ENST00000381089 ZNF622Q969S3 477 aaKnown RBP eCLIP21.5■■□□□ 1.03
VCX3A-201ENST00000381089 ZNF496Q96IT1 587 aaPredicted RBP21.5■■□□□ 1.03
VCX3A-201ENST00000381089 CARMIL3Q8ND23 1372 aa21.49■■□□□ 1.03
VCX3A-201ENST00000381089 NPC1L1Q9UHC9 1359 aa21.49■■□□□ 1.03
VCX3A-201ENST00000381089 IL6STP40189 918 aaPredicted RBP21.49■■□□□ 1.03
VCX3A-201ENST00000381089 TBC1D9BQ66K14 1250 aa21.49■■□□□ 1.03
VCX3A-201ENST00000381089 DPY19L2Q6NUT2 758 aa21.49■■□□□ 1.03
VCX3A-201ENST00000381089 FMNL2Q96PY5 1086 aa21.49■■□□□ 1.03
VCX3A-201ENST00000381089 BRIP1Q9BX63 1249 aa21.49■■□□□ 1.03
VCX3A-201ENST00000381089 TIAM2Q8IVF5 1701 aa21.47■■□□□ 1.03
VCX3A-201ENST00000381089 IL17REQ8NFR9 667 aa21.47■■□□□ 1.03
VCX3A-201ENST00000381089 TBC1D2BQ9UPU7 963 aa21.47■■□□□ 1.03
VCX3A-201ENST00000381089 SCN7AQ01118 1682 aa21.47■■□□□ 1.03
VCX3A-201ENST00000381089 COL3A1P02461 1466 aaPredicted RBP21.46■■□□□ 1.03
VCX3A-201ENST00000381089 NFKBIEO00221 500 aa21.46■■□□□ 1.03
VCX3A-201ENST00000381089 CNGB1Q14028 1251 aaPredicted RBP21.46■■□□□ 1.03
VCX3A-201ENST00000381089 CFAP53Q96M91 514 aa21.46■■□□□ 1.03
VCX3A-201ENST00000381089 SETDB2Q96T68 719 aa21.46■■□□□ 1.03
VCX3A-201ENST00000381089 CCDC88AQ3V6T2 1871 aa21.45■■□□□ 1.02
VCX3A-201ENST00000381089 ST5P78524 1137 aa21.45■■□□□ 1.02
VCX3A-201ENST00000381089 PRR5LQ6MZQ0 368 aa21.45■■□□□ 1.02
VCX3A-201ENST00000381089 CNBD1Q8NA66 436 aa21.45■■□□□ 1.02
VCX3A-201ENST00000381089 BTBD11A6QL63 1104 aa21.44■■□□□ 1.02
VCX3A-201ENST00000381089 C21orf2O43822 256 aa21.44■■□□□ 1.02
VCX3A-201ENST00000381089 PRELPP51888 382 aa21.44■■□□□ 1.02
VCX3A-201ENST00000381089 CNKSR1Q969H4 720 aa21.44■■□□□ 1.02
VCX3A-201ENST00000381089 SIPA1L3O60292 1781 aaPredicted RBP21.43■■□□□ 1.02
VCX3A-201ENST00000381089 ERFEQ4G0M1 354 aa21.43■■□□□ 1.02
VCX3A-201ENST00000381089 SOGA3Q5TF21 947 aa21.43■■□□□ 1.02
VCX3A-201ENST00000381089 ZNF219Q9P2Y4 722 aaPredicted RBP21.43■■□□□ 1.02
VCX3A-201ENST00000381089 ANKRD31Q8N7Z5 1873 aa21.42■■□□□ 1.02
VCX3A-201ENST00000381089 CEMIPQ8WUJ3 1361 aa21.42■■□□□ 1.02
VCX3A-201ENST00000381089 TAOK3Q9H2K8 898 aa21.42■■□□□ 1.02
VCX3A-201ENST00000381089 NUDCQ9Y266 331 aa21.42■■□□□ 1.02
VCX3A-201ENST00000381089 A1BGP04217 495 aa21.41■■□□□ 1.02
VCX3A-201ENST00000381089 LTBP3Q9NS15 1303 aa21.4■■□□□ 1.02
VCX3A-201ENST00000381089 CAMTA2O94983 1202 aa21.4■■□□□ 1.02
VCX3A-201ENST00000381089 PRKAR2BP31323 418 aa21.4■■□□□ 1.02
VCX3A-201ENST00000381089 STYK1Q6J9G0 422 aa21.4■■□□□ 1.02
VCX3A-201ENST00000381089 DZIP3Q86Y13 1208 aaKnown RBP21.4■■□□□ 1.02
VCX3A-201ENST00000381089 CCDC24Q8N4L8 307 aa21.4■■□□□ 1.02
VCX3A-201ENST00000381089 RTF1Q92541 710 aaKnown RBP21.4■■□□□ 1.02
VCX3A-201ENST00000381089 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
VCX3A-201ENST00000381089 MASTLQ96GX5 879 aa21.39■■□□□ 1.01
VCX3A-201ENST00000381089 DICER1Q9UPY3 1922 aaKnown RBP21.39■■□□□ 1.01
VCX3A-201ENST00000381089 FER1L6Q2WGJ9 1857 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms