RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
ABCF1-202ENST00000376545 OVOS2A0A0G2JMS6 1433 aa13.01□□□□□ -0.33
ABCF1-202ENST00000376545 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
ABCF1-202ENST00000376545 HSPA4P34932 840 aa13□□□□□ -0.33
ABCF1-202ENST00000376545 NECTIN2Q92692 538 aa13□□□□□ -0.33
ABCF1-202ENST00000376545 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
ABCF1-202ENST00000376545 IL25Q9H293 177 aa12.99□□□□□ -0.33
ABCF1-202ENST00000376545 CAVIN1Q6NZI2 390 aaKnown RBP12.99□□□□□ -0.33
ABCF1-202ENST00000376545 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
ABCF1-202ENST00000376545 NUTM2GQ5VZR2 741 aa12.99□□□□□ -0.33
ABCF1-202ENST00000376545 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
ABCF1-202ENST00000376545 PDLIM2Q96JY6 352 aa12.99□□□□□ -0.33
ABCF1-202ENST00000376545 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
ABCF1-202ENST00000376545 ZMYND15Q9H091 742 aa12.99□□□□□ -0.33
ABCF1-202ENST00000376545 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 SLIT3O75094 1523 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 HS1BP3Q53T59 392 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 NBPF6Q5VWK0 638 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 RILPL2Q969X0 211 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 TRIM44Q96DX7 344 aaPredicted RBP12.98□□□□□ -0.33
ABCF1-202ENST00000376545 NBPF4Q96M43 638 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 TRIM6-TRIM34B2RNG4 842 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 MTX1Q13505 466 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 RHPN1Q8TCX5 695 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 PHF8Q9UPP1 1060 aa12.98□□□□□ -0.33
ABCF1-202ENST00000376545 ANO2Q9NQ90 1003 aa12.97□□□□□ -0.33
ABCF1-202ENST00000376545 ADCY9O60503 1353 aa12.97□□□□□ -0.33
ABCF1-202ENST00000376545 KIF1BPQ96EK5 621 aa12.97□□□□□ -0.33
ABCF1-202ENST00000376545 RBSNQ9H1K0 784 aa12.97□□□□□ -0.33
ABCF1-202ENST00000376545 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
ABCF1-202ENST00000376545 SGSM2O43147 1006 aa12.97□□□□□ -0.33
ABCF1-202ENST00000376545 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
ABCF1-202ENST00000376545 TMEM63CQ9P1W3 806 aa12.97□□□□□ -0.33
ABCF1-202ENST00000376545 RAD50Q92878 1312 aa12.96□□□□□ -0.33
ABCF1-202ENST00000376545 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
ABCF1-202ENST00000376545 LRSAM1Q6UWE0 723 aa12.96□□□□□ -0.33
ABCF1-202ENST00000376545 MBD3O95983 291 aa12.96□□□□□ -0.34
ABCF1-202ENST00000376545 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.34
ABCF1-202ENST00000376545 AKAP4Q5JQC9 854 aa12.96□□□□□ -0.34
ABCF1-202ENST00000376545 DNAAF4Q8WXU2 420 aa12.96□□□□□ -0.34
ABCF1-202ENST00000376545 IL1RAPL2Q9NP60 686 aa12.96□□□□□ -0.34
ABCF1-202ENST00000376545 NSFL1CQ9UNZ2 370 aaKnown RBP12.96□□□□□ -0.34
ABCF1-202ENST00000376545 A0A0U1RQG5 324 aaPredicted RBP12.95□□□□□ -0.34
ABCF1-202ENST00000376545 LTV1Q96GA3 475 aaPredicted RBP12.95□□□□□ -0.34
ABCF1-202ENST00000376545 TTC14Q96N46 770 aa12.95□□□□□ -0.34
ABCF1-202ENST00000376545 LSG1Q9H089 658 aaKnown RBP12.95□□□□□ -0.34
ABCF1-202ENST00000376545 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
ABCF1-202ENST00000376545 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
ABCF1-202ENST00000376545 CHPF2Q9P2E5 772 aa12.95□□□□□ -0.34
ABCF1-202ENST00000376545 TRPM3Q9HCF6 1732 aaPredicted RBP12.95□□□□□ -0.34
ABCF1-202ENST00000376545 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
ABCF1-202ENST00000376545 ZSCAN30Q86W11 494 aa12.95□□□□□ -0.34
ABCF1-202ENST00000376545 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
ABCF1-202ENST00000376545 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
ABCF1-202ENST00000376545 RBM27Q9P2N5 1060 aaKnown RBP12.94□□□□□ -0.34
ABCF1-202ENST00000376545 SETD1BQ9UPS6 1966 aaKnown RBP12.94□□□□□ -0.34
ABCF1-202ENST00000376545 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
ABCF1-202ENST00000376545 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
ABCF1-202ENST00000376545 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
ABCF1-202ENST00000376545 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
ABCF1-202ENST00000376545 KCNQ3O43525 872 aa12.93□□□□□ -0.34
ABCF1-202ENST00000376545 TMEM87AQ8NBN3 555 aa12.93□□□□□ -0.34
ABCF1-202ENST00000376545 SNX14Q9Y5W7 946 aa12.93□□□□□ -0.34
ABCF1-202ENST00000376545 PXDNQ92626 1479 aa12.93□□□□□ -0.34
ABCF1-202ENST00000376545 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
ABCF1-202ENST00000376545 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
ABCF1-202ENST00000376545 ANP32BQ92688 251 aaKnown RBP12.93□□□□□ -0.34
ABCF1-202ENST00000376545 KCNB2Q92953 911 aa12.93□□□□□ -0.34
ABCF1-202ENST00000376545 CNTROBQ8N137 903 aa12.93□□□□□ -0.34
ABCF1-202ENST00000376545 TCHHQ07283 1943 aa12.92□□□□□ -0.34
ABCF1-202ENST00000376545 ALDH1L1O75891 902 aa12.92□□□□□ -0.34
ABCF1-202ENST00000376545 AMOTQ4VCS5 1084 aa12.92□□□□□ -0.34
ABCF1-202ENST00000376545 MST1RQ04912 1400 aa12.92□□□□□ -0.34
ABCF1-202ENST00000376545 EIF2S2P20042 333 aaKnown RBP12.92□□□□□ -0.34
ABCF1-202ENST00000376545 DBF4Q9UBU7 674 aaPredicted RBP12.92□□□□□ -0.34
ABCF1-202ENST00000376545 UTYO14607 1347 aa12.92□□□□□ -0.34
ABCF1-202ENST00000376545 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
ABCF1-202ENST00000376545 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
ABCF1-202ENST00000376545 GLIPR1L2Q4G1C9 344 aa12.91□□□□□ -0.34
ABCF1-202ENST00000376545 UPF3BQ9BZI7 483 aaKnown RBP12.91□□□□□ -0.34
ABCF1-202ENST00000376545 WDR33Q9C0J8 1336 aaKnown RBP12.91□□□□□ -0.34
ABCF1-202ENST00000376545 PLEKHO1Q53GL0 409 aaPredicted RBP12.91□□□□□ -0.34
ABCF1-202ENST00000376545 NOL7Q9UMY1 257 aaKnown RBP12.91□□□□□ -0.34
ABCF1-202ENST00000376545 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
ABCF1-202ENST00000376545 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
ABCF1-202ENST00000376545 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
ABCF1-202ENST00000376545 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
ABCF1-202ENST00000376545 RASEFQ8IZ41 740 aa12.9□□□□□ -0.34
ABCF1-202ENST00000376545 NAP1L5Q96NT1 182 aaPredicted RBP12.9□□□□□ -0.34
ABCF1-202ENST00000376545 SYCE3A1L190 88 aa12.9□□□□□ -0.34
ABCF1-202ENST00000376545 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
ABCF1-202ENST00000376545 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.35
ABCF1-202ENST00000376545 MRC1P22897 1456 aa12.89□□□□□ -0.35
ABCF1-202ENST00000376545 ZNF530Q6P9A1 599 aaPredicted RBP12.89□□□□□ -0.35
ABCF1-202ENST00000376545 KSR2Q6VAB6 950 aa12.89□□□□□ -0.35
ABCF1-202ENST00000376545 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
ABCF1-202ENST00000376545 RGPD5Q99666 1765 aa12.89□□□□□ -0.35
ABCF1-202ENST00000376545 ZNF500O60304 480 aaPredicted RBP12.89□□□□□ -0.35
ABCF1-202ENST00000376545 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
ABCF1-202ENST00000376545 TEFQ10587 303 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms