RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 TEFQ10587 303 aa12.12□□□□□ -0.47
RBBP4-201ENST00000373485 EZH2Q15910 746 aaKnown RBP12.12□□□□□ -0.47
RBBP4-201ENST00000373485 THUMPD2Q9BTF0 503 aaKnown RBP12.12□□□□□ -0.47
RBBP4-201ENST00000373485 TMEM106CQ9BVX2 250 aa12.12□□□□□ -0.47
RBBP4-201ENST00000373485 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
RBBP4-201ENST00000373485 ASAP1Q9ULH1 1129 aa12.11□□□□□ -0.47
RBBP4-201ENST00000373485 VIRMAQ69YN4 1812 aaKnown RBP12.11□□□□□ -0.47
RBBP4-201ENST00000373485 PLSCR1O15162 318 aa12.11□□□□□ -0.47
RBBP4-201ENST00000373485 RGL2O15211 777 aa12.11□□□□□ -0.47
RBBP4-201ENST00000373485 CAMKK2Q96RR4 588 aa12.11□□□□□ -0.47
RBBP4-201ENST00000373485 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
RBBP4-201ENST00000373485 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
RBBP4-201ENST00000373485 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
RBBP4-201ENST00000373485 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
RBBP4-201ENST00000373485 SLC39A6Q13433 755 aa12.1□□□□□ -0.47
RBBP4-201ENST00000373485 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
RBBP4-201ENST00000373485 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
RBBP4-201ENST00000373485 TRIM35Q9UPQ4 493 aa12.1□□□□□ -0.47
RBBP4-201ENST00000373485 CEMIPQ8WUJ3 1361 aa12.1□□□□□ -0.47
RBBP4-201ENST00000373485 PALLDQ8WX93 1383 aa12.09□□□□□ -0.47
RBBP4-201ENST00000373485 KCNQ4P56696 695 aa12.09□□□□□ -0.47
RBBP4-201ENST00000373485 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
RBBP4-201ENST00000373485 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
RBBP4-201ENST00000373485 MRC1P22897 1456 aa12.08□□□□□ -0.48
RBBP4-201ENST00000373485 BTBD11A6QL63 1104 aa12.08□□□□□ -0.48
RBBP4-201ENST00000373485 PTCD1O75127 700 aaKnown RBP12.08□□□□□ -0.48
RBBP4-201ENST00000373485 TAF7Q15545 349 aaPredicted RBP12.08□□□□□ -0.48
RBBP4-201ENST00000373485 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
RBBP4-201ENST00000373485 CCNL1Q9UK58 526 aaPredicted RBP12.07□□□□□ -0.48
RBBP4-201ENST00000373485 LAS1LQ9Y4W2 734 aaKnown RBP12.07□□□□□ -0.48
RBBP4-201ENST00000373485 KCNQ3O43525 872 aa12.06□□□□□ -0.48
RBBP4-201ENST00000373485 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
RBBP4-201ENST00000373485 SLC39A7Q92504 469 aa12.06□□□□□ -0.48
RBBP4-201ENST00000373485 LRRC4BQ9NT99 713 aa12.06□□□□□ -0.48
RBBP4-201ENST00000373485 LOC102724428A0A0B4J2F2 783 aa12.05□□□□□ -0.48
RBBP4-201ENST00000373485 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
RBBP4-201ENST00000373485 SIK1P57059 783 aa12.05□□□□□ -0.48
RBBP4-201ENST00000373485 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
RBBP4-201ENST00000373485 SIPA1L3O60292 1781 aaPredicted RBP12.05□□□□□ -0.48
RBBP4-201ENST00000373485 C7P10643 843 aa12.04□□□□□ -0.48
RBBP4-201ENST00000373485 SLC27A3Q5K4L6 730 aa12.04□□□□□ -0.48
RBBP4-201ENST00000373485 IER5LQ5T953 404 aa12.04□□□□□ -0.48
RBBP4-201ENST00000373485 LY75O60449 1722 aa12.04□□□□□ -0.48
RBBP4-201ENST00000373485 RGPD3A6NKT7 1758 aaPredicted RBP12.04□□□□□ -0.48
RBBP4-201ENST00000373485 RGPD4Q7Z3J3 1758 aa12.04□□□□□ -0.48
RBBP4-201ENST00000373485 WWC1Q8IX03 1113 aa12.03□□□□□ -0.48
RBBP4-201ENST00000373485 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
RBBP4-201ENST00000373485 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
RBBP4-201ENST00000373485 TSPYL4Q9UJ04 414 aa12.03□□□□□ -0.48
RBBP4-201ENST00000373485 RREB1Q92766 1687 aa12.03□□□□□ -0.48
RBBP4-201ENST00000373485 PAPPAQ13219 1627 aa12.03□□□□□ -0.48
RBBP4-201ENST00000373485 ITPK1Q13572 414 aa12.03□□□□□ -0.48
RBBP4-201ENST00000373485 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
RBBP4-201ENST00000373485 ZNF496Q96IT1 587 aaPredicted RBP12.03□□□□□ -0.48
RBBP4-201ENST00000373485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
RBBP4-201ENST00000373485 CALD1Q05682 793 aaKnown RBP12.02□□□□□ -0.49
RBBP4-201ENST00000373485 NUP188Q5SRE5 1749 aa12.02□□□□□ -0.49
RBBP4-201ENST00000373485 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
RBBP4-201ENST00000373485 FMNL2Q96PY5 1086 aa12.02□□□□□ -0.49
RBBP4-201ENST00000373485 KCPQ6ZWJ8 1503 aa12.01□□□□□ -0.49
RBBP4-201ENST00000373485 CHL1O00533 1208 aa12.01□□□□□ -0.49
RBBP4-201ENST00000373485 NBPF14Q5TI25 921 aa12.01□□□□□ -0.49
RBBP4-201ENST00000373485 DNAJC10Q8IXB1 793 aa12.01□□□□□ -0.49
RBBP4-201ENST00000373485 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
RBBP4-201ENST00000373485 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
RBBP4-201ENST00000373485 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
RBBP4-201ENST00000373485 EIF4A1P60842 406 aaKnown RBP12□□□□□ -0.49
RBBP4-201ENST00000373485 GNAI1P63096 354 aa12□□□□□ -0.49
RBBP4-201ENST00000373485 NGEFQ8N5V2 710 aa12□□□□□ -0.49
RBBP4-201ENST00000373485 STK32BQ9NY57 414 aa12□□□□□ -0.49
RBBP4-201ENST00000373485 HEG1Q9ULI3 1381 aa12□□□□□ -0.49
RBBP4-201ENST00000373485 UBR2Q8IWV8 1755 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 PRAMEF22A3QJZ6 481 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
RBBP4-201ENST00000373485 R3HDM1Q15032 1099 aaKnown RBP11.99□□□□□ -0.49
RBBP4-201ENST00000373485 ZNF827Q17R98 1081 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 WDR63Q8IWG1 891 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 IFT57Q9NWB7 429 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 BABAM1Q9NWV8 329 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 C5P01031 1676 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 KDM3BQ7LBC6 1761 aa11.99□□□□□ -0.49
RBBP4-201ENST00000373485 PSDA5PKW4 1024 aaPredicted RBP11.98□□□□□ -0.49
RBBP4-201ENST00000373485 SNRPA1P09661 255 aaKnown RBP11.98□□□□□ -0.49
RBBP4-201ENST00000373485 ZNF853P0CG23 659 aa11.98□□□□□ -0.49
RBBP4-201ENST00000373485 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
RBBP4-201ENST00000373485 VSIG10Q8N0Z9 540 aa11.98□□□□□ -0.49
RBBP4-201ENST00000373485 TSR2Q969E8 191 aaKnown RBP11.98□□□□□ -0.49
RBBP4-201ENST00000373485 AK7Q96M32 723 aa11.98□□□□□ -0.49
RBBP4-201ENST00000373485 TAF1LQ8IZX4 1826 aa11.98□□□□□ -0.49
RBBP4-201ENST00000373485 TJP1Q07157 1748 aa11.98□□□□□ -0.49
RBBP4-201ENST00000373485 KRT24Q2M2I5 525 aa11.97□□□□□ -0.49
RBBP4-201ENST00000373485 SMIM5Q71RC9 77 aa11.97□□□□□ -0.49
RBBP4-201ENST00000373485 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
RBBP4-201ENST00000373485 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
RBBP4-201ENST00000373485 IL16Q14005 1332 aa11.97□□□□□ -0.49
RBBP4-201ENST00000373485 C4BP0C0L5 1744 aa11.96□□□□□ -0.49
RBBP4-201ENST00000373485 GNPATO15228 680 aa11.96□□□□□ -0.49
RBBP4-201ENST00000373485 GIGYF1O75420 1035 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms