RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 C20orf194Q5TEA3 1177 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 EIF4A2Q14240 407 aaKnown RBP7.81□□□□□ -1.16
CHD6-203ENST00000373233 MYCBPQ99417 103 aaPredicted RBP7.81□□□□□ -1.16
CHD6-203ENST00000373233 GOLGA6L10A6NI86 522 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 MPHOSPH10O00566 681 aaKnown RBP7.81□□□□□ -1.16
CHD6-203ENST00000373233 IPO7O95373 1038 aaKnown RBP7.81□□□□□ -1.16
CHD6-203ENST00000373233 SSH1Q8WYL5 1049 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 REC8O95072 547 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 MIS18AQ9NYP9 233 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 CADPS2Q86UW7 1296 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 CHMP3Q9Y3E7 222 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 CDK12Q9NYV4 1490 aaPredicted RBP7.81□□□□□ -1.16
CHD6-203ENST00000373233 ZC3H6P61129 1189 aaKnown RBP7.81□□□□□ -1.16
CHD6-203ENST00000373233 HSP90AB2PQ58FF8 381 aa7.8□□□□□ -1.16
CHD6-203ENST00000373233 CREBRFQ8IUR6 639 aa7.8□□□□□ -1.16
CHD6-203ENST00000373233 C22orf23Q9BZE7 217 aa7.8□□□□□ -1.16
CHD6-203ENST00000373233 ATF7IPQ6VMQ6 1270 aa7.8□□□□□ -1.16
CHD6-203ENST00000373233 ZNF622Q969S3 477 aaKnown RBP eCLIP7.8□□□□□ -1.168e-7■■■□□ 15.7
CHD6-203ENST00000373233 DDX58O95786 925 aaKnown RBP7.8□□□□□ -1.16
CHD6-203ENST00000373233 ALDH1L2Q3SY69 923 aa7.8□□□□□ -1.16
CHD6-203ENST00000373233 SBNO1A3KN83 1393 aa7.8□□□□□ -1.16
CHD6-203ENST00000373233 HSPA2P54652 639 aa7.8□□□□□ -1.16
CHD6-203ENST00000373233 C9orf78Q9NZ63 289 aaPredicted RBP7.8□□□□□ -1.16
CHD6-203ENST00000373233 ENOX2Q16206 610 aaKnown RBP7.8□□□□□ -1.16
CHD6-203ENST00000373233 TTC31Q49AM3 519 aaPredicted RBP7.8□□□□□ -1.16
CHD6-203ENST00000373233 TOM1L2Q6ZVM7 507 aa7.8□□□□□ -1.16
CHD6-203ENST00000373233 MPNDQ8N594 471 aa7.8□□□□□ -1.16
CHD6-203ENST00000373233 CCDC102AQ96A19 550 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 ZNF428Q96B54 188 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 ARHGEF10O15013 1369 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 NEXNQ0ZGT2 675 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 RASSF4Q9H2L5 321 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 MBIPQ9NS73 344 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 MCM5P33992 734 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 KIAA1328Q86T90 577 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 DMRT2Q9Y5R5 561 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 SHTN1A0MZ66 631 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 AEBP2Q6ZN18 517 aaPredicted RBP7.79□□□□□ -1.16
CHD6-203ENST00000373233 KNDC1Q76NI1 1749 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 SPC24Q8NBT2 197 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 ANKRD20A12PQ8NF67 263 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 C1orf115Q9H7X2 142 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 SLC4A2P04920 1241 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 GBP2P32456 591 aaPredicted RBP7.79□□□□□ -1.16
CHD6-203ENST00000373233 HDGFL1Q5TGJ6 251 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 C19orf44Q9H6X5 657 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 PIK3R4Q99570 1358 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 BTBD11A6QL63 1104 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 AMOTQ4VCS5 1084 aa7.79□□□□□ -1.16
CHD6-203ENST00000373233 FAM83GA6ND36 823 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 SUDS3Q9H7L9 328 aaPredicted RBP7.78□□□□□ -1.16
CHD6-203ENST00000373233 PLEKHG3A1L390 1219 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 ARID4AP29374 1257 aaPredicted RBP7.78□□□□□ -1.16
CHD6-203ENST00000373233 ANKRD24Q8TF21 1146 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 USP6P35125 1406 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 CCT4P50991 539 aaKnown RBP7.78□□□□□ -1.16
CHD6-203ENST00000373233 PTCH1Q13635 1447 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 ANKARQ7Z5J8 1434 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 NPHP3Q7Z494 1330 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 SYTL4Q96C24 671 aaPredicted RBP7.78□□□□□ -1.16
CHD6-203ENST00000373233 TMEM57Q8N5G2 664 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 CPS1P31327 1500 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 POLR3GO15318 223 aaPredicted RBP7.78□□□□□ -1.16
CHD6-203ENST00000373233 IL13P35225 146 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 DNAJC5Q9H3Z4 198 aa7.78□□□□□ -1.16
CHD6-203ENST00000373233 MYO6Q9UM54 1294 aa7.77□□□□□ -1.16
CHD6-203ENST00000373233 UBTFL1P0CB47 393 aaPredicted RBP7.77□□□□□ -1.17
CHD6-203ENST00000373233 LRCH2Q5VUJ6 765 aa7.77□□□□□ -1.17
CHD6-203ENST00000373233 WDR66Q8TBY9 1149 aa7.77□□□□□ -1.17
CHD6-203ENST00000373233 NAT10Q9H0A0 1025 aaKnown RBP7.77□□□□□ -1.17
CHD6-203ENST00000373233 CABP4P57796 275 aa7.77□□□□□ -1.17
CHD6-203ENST00000373233 TMCO3Q6UWJ1 677 aa7.77□□□□□ -1.17
CHD6-203ENST00000373233 MICALCLQ6ZW33 695 aa7.77□□□□□ -1.17
CHD6-203ENST00000373233 PHACTR3Q96KR7 559 aa7.77□□□□□ -1.17
CHD6-203ENST00000373233 CIZ1Q9ULV3 898 aaPredicted RBP7.77□□□□□ -1.17
CHD6-203ENST00000373233 TAF7Q15545 349 aaPredicted RBP7.77□□□□□ -1.17
CHD6-203ENST00000373233 FBXW7Q969H0 707 aa7.77□□□□□ -1.17
CHD6-203ENST00000373233 LRRCC1Q9C099 1032 aa7.77□□□□□ -1.17
CHD6-203ENST00000373233 PRIMPOLQ96LW4 560 aa7.77□□□□□ -1.17
CHD6-203ENST00000373233 MAP3K19Q56UN5 1328 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 BICD2Q8TD16 824 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 TMX4Q9H1E5 349 aaPredicted RBP7.76□□□□□ -1.17
CHD6-203ENST00000373233 MAP3K5Q99683 1374 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 LIG1P18858 919 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 AIMP1Q12904 312 aaKnown RBP7.76□□□□□ -1.17
CHD6-203ENST00000373233 PDZRN3Q9UPQ7 1066 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 MED14O60244 1454 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 AKAP12Q02952 1782 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 H3BQV1 296 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 KIF2AO00139 706 aaPredicted RBP7.76□□□□□ -1.17
CHD6-203ENST00000373233 HOXC9P31274 260 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 IFFO2Q5TF58 517 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 BCCIPQ9P287 314 aaKnown RBP eCLIP7.76□□□□□ -1.17
CHD6-203ENST00000373233 LNPKQ9C0E8 428 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 PRR36Q9H6K5 1346 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 RIC3Q7Z5B4 369 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 RGPD8O14715 1765 aaPredicted RBP7.76□□□□□ -1.17
CHD6-203ENST00000373233 IVLP07476 585 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 GNAI3P08754 354 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 MCM4P33991 863 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms