RNA–Protein interactions for RNA: ENST00000371655.3

RAB3B-201, Transcript of RAB3B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3B, Length 12,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3B-201ENST00000371655 ZRANB1Q9UGI0 708 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 CDC42BPAQ5VT25 1732 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 ANKRD13DQ6ZTN6 518 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 DCTPP1Q9H773 170 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 UNC13BO14795 1591 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 STK38Q15208 465 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 UBAC1Q9BSL1 405 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 GCP02774 474 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 VPS53Q5VIR6 699 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 LRRC59Q96AG4 307 aaKnown RBP7.56□□□□□ -1.2
RAB3B-201ENST00000371655 ANAPC15P60006 121 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 MAP3K12Q12852 859 aa7.56□□□□□ -1.2
RAB3B-201ENST00000371655 PTCD1O75127 700 aaKnown RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 SLC5A1P13866 664 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 LARP1BQ659C4 914 aaKnown RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 RHPN1Q8TCX5 695 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 PCDH11XQ9BZA7 1347 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 PCDH11YQ9BZA8 1340 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 LIMCH1Q9UPQ0 1083 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 NUTM2BA6NNL0 878 aaPredicted RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 NUTM2EB1AL46 878 aaPredicted RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 HMGN5P82970 282 aaKnown RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 TTF1Q15361 905 aaPredicted RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 NUTM2AQ8IVF1 878 aaPredicted RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 CCDC39Q9UFE4 941 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 PCDHB15Q9Y5E8 787 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 TTC41PQ6P2S7 1318 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 CTDP1Q9Y5B0 961 aaPredicted RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 AOX1Q06278 1338 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 TULP1O00294 542 aaPredicted RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 CAVIN1Q6NZI2 390 aaKnown RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 CDC5LQ99459 802 aaKnown RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 SCAND2PQ9GZW5 306 aaPredicted RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 FKBP4Q02790 459 aaKnown RBP eCLIP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 ZCRB1Q8TBF4 217 aaKnown RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 TXLNAP40222 546 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 RAI14Q9P0K7 980 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 TRMT112Q9UI30 125 aaKnown RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 LMTK2Q8IWU2 1503 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 OLFM4Q6UX06 510 aa7.55□□□□□ -1.2
RAB3B-201ENST00000371655 SMARCA5O60264 1052 aaPredicted RBP7.55□□□□□ -1.2
RAB3B-201ENST00000371655 FAM177BA6PVY3 158 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 ZPR1O75312 459 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 FBXW7Q969H0 707 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 IGHDP01880 384 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 TSPY26PQ9H489 355 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 DDX21Q9NR30 783 aaKnown RBP eCLIP7.54□□□□□ -1.2
RAB3B-201ENST00000371655 CASTP20810 708 aaKnown RBP7.54□□□□□ -1.2
RAB3B-201ENST00000371655 CAVIN4Q5BKX8 364 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 XAGE3Q8WTP9 111 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 BOLA2Q9H3K6 86 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 RNF41Q9H4P4 317 aaPredicted RBP7.54□□□□□ -1.2
RAB3B-201ENST00000371655 NOL7Q9UMY1 257 aaKnown RBP7.54□□□□□ -1.2
RAB3B-201ENST00000371655 PRPF40AO75400 957 aaKnown RBP7.54□□□□□ -1.2
RAB3B-201ENST00000371655 CLSTN1O94985 981 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 RAD50Q92878 1312 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 CCDC192P0DO97 292 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 KIF1BO60333 1816 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 CCDC69A6NI79 296 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 TDO2P48775 406 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 CEP85Q6P2H3 762 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 TBC1D9Q6ZT07 1266 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 ZNF287Q9HBT7 754 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 LTKP29376 864 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 IL15P40933 162 aaPredicted RBP7.54□□□□□ -1.2
RAB3B-201ENST00000371655 CHRNA2Q15822 529 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 PRPF40BQ6NWY9 871 aaKnown RBP7.54□□□□□ -1.2
RAB3B-201ENST00000371655 SLF2Q8IX21 1173 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 ERCC6L2Q5T890 1561 aa7.54□□□□□ -1.2
RAB3B-201ENST00000371655 GRM8O00222 908 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 PIP4K2BP78356 416 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 NGLY1Q96IV0 654 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 TBC1D2Q9BYX2 928 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 FBLN1P23142 703 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 CHPF2Q9P2E5 772 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 CCDC196A0A1B0GTZ2 297 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 UBE3BQ7Z3V4 1068 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 TSPYL6Q8N831 410 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 LRP2BPQ9P2M1 347 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 SNX21Q969T3 373 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 PDE1AP54750 535 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 METP08581 1390 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 CCP110O43303 1012 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 COPS6Q7L5N1 327 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.53□□□□□ -1.2
RAB3B-201ENST00000371655 CCDC173Q0VFZ6 552 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 TCEAL9Q9UHQ7 104 aa7.53□□□□□ -1.2
RAB3B-201ENST00000371655 UQCRFS1P1P0C7P4 283 aa7.52□□□□□ -1.2
RAB3B-201ENST00000371655 TRIM35Q9UPQ4 493 aa7.52□□□□□ -1.21
RAB3B-201ENST00000371655 IDH1O75874 414 aaKnown RBP7.52□□□□□ -1.21
RAB3B-201ENST00000371655 ERBB4Q15303 1308 aa7.52□□□□□ -1.21
RAB3B-201ENST00000371655 EPB41L2O43491 1005 aaKnown RBP7.52□□□□□ -1.21
RAB3B-201ENST00000371655 RNMTO43148 476 aaKnown RBP7.52□□□□□ -1.21
RAB3B-201ENST00000371655 SDSP20132 328 aa7.52□□□□□ -1.21
RAB3B-201ENST00000371655 ZBTB3Q9H5J0 574 aa7.52□□□□□ -1.21
RAB3B-201ENST00000371655 PHAXQ9H814 394 aaKnown RBP7.52□□□□□ -1.21
RAB3B-201ENST00000371655 DACH1Q9UI36 760 aa7.52□□□□□ -1.21
RAB3B-201ENST00000371655 SPATA32Q96LK8 384 aa7.52□□□□□ -1.21
RAB3B-201ENST00000371655 ABCA9Q8IUA7 1624 aa7.52□□□□□ -1.21
RAB3B-201ENST00000371655 CREBRFQ8IUR6 639 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms