RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 TMEM87AQ8NBN3 555 aa10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 ZNF215Q9UL58 517 aaPredicted RBP10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 RAD51AP2Q09MP3 1159 aa10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 TIGD1Q96MW7 591 aa10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 ATG3Q9NT62 314 aa10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 TERF2IPQ9NYB0 399 aa10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 LRRC7Q96NW7 1537 aa10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 MX1P20591 662 aa10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 NOP2P46087 812 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 FHOD1Q9Y613 1164 aa10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 DLG5Q8TDM6 1919 aa10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 BRPF1P55201 1214 aaPredicted RBP10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 NCBP3Q53F19 620 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 TULP4Q9NRJ4 1543 aa10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 TRIM66O15016 1216 aa10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 SYCP1Q15431 976 aa10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 CACTINQ8WUQ7 758 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-203ENST00000371123 FANCGO15287 622 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 PLA2G4AP47712 749 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 VGFO15240 615 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 NPHP1O15259 732 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 AMPHP49418 695 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 AIMP1Q12904 312 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 LUZP1Q86V48 1076 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 NGDNQ8NEJ9 315 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 SIRT1Q96EB6 747 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 TMX1Q9H3N1 280 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 UBR1Q8IWV7 1749 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 NRXN1Q9ULB1 1477 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 CCDC186Q7Z3E2 898 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 PHACTR3Q96KR7 559 aa10.47□□□□□ -0.73
SMARCA1-203ENST00000371123 SMTNL1A8MU46 457 aa10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 LARGE1O95461 756 aa10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 ST3GAL1Q11201 340 aa10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 ELF2Q15723 593 aa10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 CCDC183Q5T5S1 534 aa10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 SULT6B1Q6IMI4 303 aa10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 UNC5CLQ8IV45 518 aa10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 GOLGA6L4A6NEF3 574 aa10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 ST5P78524 1137 aa10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.73
SMARCA1-203ENST00000371123 EVC2Q86UK5 1308 aa10.46□□□□□ -0.74
SMARCA1-203ENST00000371123 MYOM2P54296 1465 aa10.46□□□□□ -0.74
SMARCA1-203ENST00000371123 ALDH1L2Q3SY69 923 aa10.46□□□□□ -0.74
SMARCA1-203ENST00000371123 ZSCAN25Q6NSZ9 544 aa10.46□□□□□ -0.74
SMARCA1-203ENST00000371123 MRVI1Q9Y6F6 885 aa10.46□□□□□ -0.74
SMARCA1-203ENST00000371123 ANXA1P04083 346 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 SYTL4Q96C24 671 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 SALL3Q9BXA9 1300 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 CD163L1Q9NR16 1453 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 VPS37CA5D8V6 355 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 CEBPZQ03701 1054 aaKnown RBP10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 TWISTNBQ3B726 338 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 C8orf58Q8NAV2 365 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 ZNF592Q92610 1267 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 GTF3C6Q969F1 213 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 DIAPH3Q9NSV4 1193 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 POLKQ9UBT6 870 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 PTPRCP08575 1304 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 TNNT1P13805 278 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 PSEN1P49768 467 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 NEK11Q8NG66 645 aa10.45□□□□□ -0.74
SMARCA1-203ENST00000371123 ST18O60284 1047 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 TEX2Q8IWB9 1127 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 KRT222Q8N1A0 295 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 SLC26A8Q96RN1 970 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 NYAP1Q6ZVC0 841 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 NME9Q86XW9 330 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 FAM184AQ8NB25 1140 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 IL16Q14005 1332 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 TMEM131LA2VDJ0 1609 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 SETD1AO15047 1707 aaKnown RBP10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 FIBPO43427 364 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 PTPRMP28827 1452 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 INTS3Q68E01 1043 aaKnown RBP10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 PLA2G4DQ86XP0 818 aa10.44□□□□□ -0.74
SMARCA1-203ENST00000371123 SBNO2Q9Y2G9 1366 aa10.43□□□□□ -0.74
SMARCA1-203ENST00000371123 USHBP1Q8N6Y0 703 aa10.43□□□□□ -0.74
SMARCA1-203ENST00000371123 STK31Q9BXU1 1019 aa10.43□□□□□ -0.74
SMARCA1-203ENST00000371123 ZCCHC17Q9NP64 241 aaKnown RBP10.43□□□□□ -0.74
SMARCA1-203ENST00000371123 IRX3P78415 501 aaPredicted RBP10.43□□□□□ -0.74
SMARCA1-203ENST00000371123 CEP85Q6P2H3 762 aa10.43□□□□□ -0.74
SMARCA1-203ENST00000371123 IFIT2P09913 472 aaKnown RBP10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 CPA1P15085 419 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 H2AFXP16104 143 aaPredicted RBP10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 LIG1P18858 919 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 CDK19Q9BWU1 502 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 RNF216Q9NWF9 866 aaPredicted RBP10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 A0A087WWV3 80 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 FERMT3Q86UX7 667 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 IL17RAQ96F46 866 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 COG3Q96JB2 828 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 UBXN6Q9BZV1 441 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 SETD1BQ9UPS6 1966 aaKnown RBP10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 ADGRB3O60242 1522 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms