RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 NUP62CLQ9H1M0 184 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 ST5P78524 1137 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 FILIP1Q7Z7B0 1213 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 SKAP1Q86WV1 359 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 GOLIM4O00461 696 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 ANXA1P04083 346 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 NLRP5P59047 1200 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 WASLO00401 505 aaPredicted RBP9.98□□□□□ -0.81
ABCA4-201ENST00000370225 SAMM50Q9Y512 469 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 FAM83GA6ND36 823 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 IFIT3O14879 490 aaKnown RBP9.98□□□□□ -0.81
ABCA4-201ENST00000370225 HAND2P61296 217 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 ANKRD24Q8TF21 1146 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 IQSEC3Q9UPP2 1182 aaPredicted RBP9.98□□□□□ -0.81
ABCA4-201ENST00000370225 CBFA2T2O43439 604 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 HSP90AB3PQ58FF7 597 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 NBPF6Q5VWK0 638 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 NBPF5PQ86XG9 351 aaPredicted RBP9.98□□□□□ -0.81
ABCA4-201ENST00000370225 DNAAF4Q8WXU2 420 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 NBPF4Q96M43 638 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 TMX1Q9H3N1 280 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 KIF14Q15058 1648 aa9.98□□□□□ -0.81
ABCA4-201ENST00000370225 TSHZ3Q63HK5 1081 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 ZNF526Q8TF50 670 aaPredicted RBP9.97□□□□□ -0.81
ABCA4-201ENST00000370225 WDR70Q9NW82 654 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 IQCA1Q86XH1 822 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 ZSCAN31Q96LW9 406 aaPredicted RBP9.97□□□□□ -0.81
ABCA4-201ENST00000370225 PSMD1Q99460 953 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 ADGRF5Q8IZF2 1346 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 ATP6V1AP38606 617 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 ZRSR2Q15696 482 aaKnown RBP9.97□□□□□ -0.81
ABCA4-201ENST00000370225 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 VTI1AQ96AJ9 217 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 PPP1R12BO60237 982 aaPredicted RBP9.97□□□□□ -0.81
ABCA4-201ENST00000370225 SSRP1Q08945 709 aaKnown RBP9.97□□□□□ -0.81
ABCA4-201ENST00000370225 CFAP100Q494V2 611 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 SPTY2D1Q68D10 685 aaPredicted RBP9.97□□□□□ -0.81
ABCA4-201ENST00000370225 RPAP2Q8IXW5 612 aaPredicted RBP9.97□□□□□ -0.81
ABCA4-201ENST00000370225 HYPKQ9NX55 129 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 RAB11FIP3O75154 756 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 GBP2P32456 591 aaPredicted RBP9.97□□□□□ -0.81
ABCA4-201ENST00000370225 LDHAL6AQ6ZMR3 332 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 ANKRD18AQ8IVF6 992 aa9.97□□□□□ -0.81
ABCA4-201ENST00000370225 CAMSAP2Q08AD1 1489 aa9.96□□□□□ -0.81
ABCA4-201ENST00000370225 SSH1Q8WYL5 1049 aa9.96□□□□□ -0.81
ABCA4-201ENST00000370225 LRPPRCP42704 1394 aaKnown RBP9.96□□□□□ -0.81
ABCA4-201ENST00000370225 GOLGA8BA8MQT2 603 aa9.96□□□□□ -0.81
ABCA4-201ENST00000370225 GLRX3O76003 335 aaKnown RBP9.96□□□□□ -0.81
ABCA4-201ENST00000370225 POTEJP0CG39 1038 aa9.96□□□□□ -0.81
ABCA4-201ENST00000370225 RBM26Q5T8P6 1007 aaKnown RBP9.96□□□□□ -0.81
ABCA4-201ENST00000370225 SLF2Q8IX21 1173 aa9.96□□□□□ -0.81
ABCA4-201ENST00000370225 TIAM1Q13009 1591 aa9.96□□□□□ -0.82
ABCA4-201ENST00000370225 PLB1Q6P1J6 1458 aa9.96□□□□□ -0.82
ABCA4-201ENST00000370225 GOLGA8AA7E2F4 631 aa9.96□□□□□ -0.82
ABCA4-201ENST00000370225 PICALMQ13492 652 aa9.96□□□□□ -0.82
ABCA4-201ENST00000370225 UBE3BQ7Z3V4 1068 aa9.96□□□□□ -0.82
ABCA4-201ENST00000370225 DRC1Q96MC2 740 aa9.96□□□□□ -0.82
ABCA4-201ENST00000370225 EPB41L2O43491 1005 aaKnown RBP9.96□□□□□ -0.82
ABCA4-201ENST00000370225 CWC25Q9NXE8 425 aaPredicted RBP9.96□□□□□ -0.82
ABCA4-201ENST00000370225 WDR97A6NE52 1622 aa9.96□□□□□ -0.82
ABCA4-201ENST00000370225 CCDC141Q6ZP82 1450 aa9.96□□□□□ -0.82
ABCA4-201ENST00000370225 MAGI1Q96QZ7 1491 aaPredicted RBP9.96□□□□□ -0.82
ABCA4-201ENST00000370225 ANAPC15P60006 121 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 IDI1Q13907 227 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 CATIPQ7Z7H3 387 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 ZNF397Q8NF99 534 aaPredicted RBP9.95□□□□□ -0.82
ABCA4-201ENST00000370225 CABLES1Q8TDN4 633 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 MMRN2Q9H8L6 949 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 MACROD2A1Z1Q3 448 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 C11orf95C9JLR9 678 aaPredicted RBP9.95□□□□□ -0.82
ABCA4-201ENST00000370225 SLFN5Q08AF3 891 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 C8orf76Q96K31 380 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 TSG101Q99816 390 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 MYO1BO43795 1136 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.95□□□□□ -0.82
ABCA4-201ENST00000370225 TSPY2A6NKD2 308 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 CTNNBL1Q8WYA6 563 aaPredicted RBP9.95□□□□□ -0.82
ABCA4-201ENST00000370225 IFNL2Q8IZJ0 200 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 TAF4BQ92750 862 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 IQGAP2Q13576 1575 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 JAKMIP3Q5VZ66 844 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 PPP1R42Q7Z4L9 355 aa9.95□□□□□ -0.82
ABCA4-201ENST00000370225 CDC5LQ99459 802 aaKnown RBP9.95□□□□□ -0.82
ABCA4-201ENST00000370225 CCDC194A0A1B0GVG4 234 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 CACNA2D4Q7Z3S7 1137 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 TXLNBQ8N3L3 684 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 TMEM266Q2M3C6 531 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 PANK2Q9BZ23 570 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 DBF4Q9UBU7 674 aaPredicted RBP9.94□□□□□ -0.82
ABCA4-201ENST00000370225 SYCE3A1L190 88 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 CCDC150Q8NCX0 1101 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 CABP5Q9NP86 173 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 BRPF3Q9ULD4 1205 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 HMGB2P26583 209 aaKnown RBP9.94□□□□□ -0.82
ABCA4-201ENST00000370225 USP8P40818 1118 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 ISM2Q6H9L7 571 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 KAT14Q9H8E8 782 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 DMRT2Q9Y5R5 561 aa9.94□□□□□ -0.82
ABCA4-201ENST00000370225 DNMBPQ6XZF7 1577 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms