RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 TIAM1Q13009 1591 aa20.89■□□□□ 0.93
SNX27-203ENST00000368843 LRPPRCP42704 1394 aaKnown RBP20.89■□□□□ 0.93
SNX27-203ENST00000368843 ANAPC15P60006 121 aa20.89■□□□□ 0.93
SNX27-203ENST00000368843 SSRP1Q08945 709 aaKnown RBP20.89■□□□□ 0.93
SNX27-203ENST00000368843 EZRP15311 586 aaKnown RBP20.88■□□□□ 0.93
SNX27-203ENST00000368843 RFC4P35249 363 aa20.88■□□□□ 0.93
SNX27-203ENST00000368843 FILIP1Q7Z7B0 1213 aa20.88■□□□□ 0.93
SNX27-203ENST00000368843 NLRP5P59047 1200 aa20.88■□□□□ 0.93
SNX27-203ENST00000368843 HYPKQ9NX55 129 aa20.88■□□□□ 0.93
SNX27-203ENST00000368843 TMEM266Q2M3C6 531 aa20.88■□□□□ 0.93
SNX27-203ENST00000368843 CCDC112Q8NEF3 446 aa20.88■□□□□ 0.93
SNX27-203ENST00000368843 CCDC196A0A1B0GTZ2 297 aa20.87■□□□□ 0.93
SNX27-203ENST00000368843 FERMT3Q86UX7 667 aa20.87■□□□□ 0.93
SNX27-203ENST00000368843 NAIPQ13075 1403 aa20.87■□□□□ 0.93
SNX27-203ENST00000368843 DNA2P51530 1060 aa20.87■□□□□ 0.93
SNX27-203ENST00000368843 POLA1P09884 1462 aaPredicted RBP20.87■□□□□ 0.93
SNX27-203ENST00000368843 A0A087WZG4 1122 aa20.87■□□□□ 0.93
SNX27-203ENST00000368843 SKAP1Q86WV1 359 aa20.87■□□□□ 0.93
SNX27-203ENST00000368843 CCDC141Q6ZP82 1450 aa20.86■□□□□ 0.93
SNX27-203ENST00000368843 ERLIN1O75477 346 aa20.86■□□□□ 0.93
SNX27-203ENST00000368843 DDX46Q7L014 1031 aaKnown RBP20.86■□□□□ 0.93
SNX27-203ENST00000368843 UQCRHLA0A096LP55 91 aa20.86■□□□□ 0.93
SNX27-203ENST00000368843 UQCRHP07919 91 aa20.86■□□□□ 0.93
SNX27-203ENST00000368843 LARP6Q9BRS8 491 aaKnown RBP20.86■□□□□ 0.93
SNX27-203ENST00000368843 IFIT3O14879 490 aaKnown RBP20.86■□□□□ 0.93
SNX27-203ENST00000368843 FKBP15Q5T1M5 1219 aa20.86■□□□□ 0.93
SNX27-203ENST00000368843 VAT1LQ9HCJ6 419 aa20.86■□□□□ 0.93
SNX27-203ENST00000368843 MAP3K2Q9Y2U5 619 aa20.86■□□□□ 0.93
SNX27-203ENST00000368843 C8orf76Q96K31 380 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 EMILIN1Q9Y6C2 1016 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 ADGRL1O94910 1474 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 ST5P78524 1137 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 CATIPQ7Z7H3 387 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 CCDC144CPQ8IYA2 1237 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 KIAA0754O94854 1291 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 CACNA2D4Q7Z3S7 1137 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 DNAAF4Q8WXU2 420 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 CETN2P41208 172 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 MAP3K11Q16584 847 aa20.85■□□□□ 0.93
SNX27-203ENST00000368843 FBXO31Q5XUX0 539 aaPredicted RBP20.85■□□□□ 0.93
SNX27-203ENST00000368843 SLFN5Q08AF3 891 aa20.84■□□□□ 0.93
SNX27-203ENST00000368843 SPA17Q15506 151 aa20.84■□□□□ 0.93
SNX27-203ENST00000368843 CCDC148Q8NFR7 591 aa20.84■□□□□ 0.93
SNX27-203ENST00000368843 RAB34Q9BZG1 259 aa20.84■□□□□ 0.93
SNX27-203ENST00000368843 GOLGA8AA7E2F4 631 aa20.84■□□□□ 0.93
SNX27-203ENST00000368843 GOLGA8BA8MQT2 603 aa20.84■□□□□ 0.93
SNX27-203ENST00000368843 DRC1Q96MC2 740 aa20.84■□□□□ 0.93
SNX27-203ENST00000368843 ARHGAP29Q52LW3 1261 aa20.84■□□□□ 0.93
SNX27-203ENST00000368843 TOP2BQ02880 1626 aa20.83■□□□□ 0.93
SNX27-203ENST00000368843 RNF41Q9H4P4 317 aaPredicted RBP20.83■□□□□ 0.93
SNX27-203ENST00000368843 EIF3JO75822 258 aaKnown RBP20.83■□□□□ 0.92
SNX27-203ENST00000368843 CAMSAP2Q08AD1 1489 aa20.83■□□□□ 0.92
SNX27-203ENST00000368843 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
SNX27-203ENST00000368843 CDC5LQ99459 802 aaKnown RBP20.82■□□□□ 0.92
SNX27-203ENST00000368843 CCDC194A0A1B0GVG4 234 aa20.82■□□□□ 0.92
SNX27-203ENST00000368843 BAG4O95429 457 aaKnown RBP20.82■□□□□ 0.92
SNX27-203ENST00000368843 CCT2P78371 535 aaKnown RBP20.82■□□□□ 0.92
SNX27-203ENST00000368843 TTC16Q8NEE8 873 aa20.82■□□□□ 0.92
SNX27-203ENST00000368843 IQGAP2Q13576 1575 aa20.82■□□□□ 0.92
SNX27-203ENST00000368843 ATP5J2-PTCD1G3V325 749 aa20.82■□□□□ 0.92
SNX27-203ENST00000368843 WASLO00401 505 aaPredicted RBP20.82■□□□□ 0.92
SNX27-203ENST00000368843 GRM1Q13255 1194 aa20.82■□□□□ 0.92
SNX27-203ENST00000368843 MTERF4Q7Z6M4 381 aaKnown RBP20.82■□□□□ 0.92
SNX27-203ENST00000368843 HMGN5P82970 282 aaKnown RBP20.82■□□□□ 0.92
SNX27-203ENST00000368843 PHAXQ9H814 394 aaKnown RBP20.82■□□□□ 0.92
SNX27-203ENST00000368843 GRPEL1Q9HAV7 217 aa20.82■□□□□ 0.92
SNX27-203ENST00000368843 TNNT1P13805 278 aa20.81■□□□□ 0.92
SNX27-203ENST00000368843 CCDC102AQ96A19 550 aa20.81■□□□□ 0.92
SNX27-203ENST00000368843 CWC25Q9NXE8 425 aaPredicted RBP20.81■□□□□ 0.92
SNX27-203ENST00000368843 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
SNX27-203ENST00000368843 CA8P35219 290 aa20.81■□□□□ 0.92
SNX27-203ENST00000368843 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
SNX27-203ENST00000368843 PPP1R42Q7Z4L9 355 aa20.81■□□□□ 0.92
SNX27-203ENST00000368843 CTNNBL1Q8WYA6 563 aaPredicted RBP20.81■□□□□ 0.92
SNX27-203ENST00000368843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.81■□□□□ 0.92
SNX27-203ENST00000368843 SAMM50Q9Y512 469 aa20.81■□□□□ 0.92
SNX27-203ENST00000368843 CCDC113Q9H0I3 377 aa20.81■□□□□ 0.92
SNX27-203ENST00000368843 DBF4Q9UBU7 674 aaPredicted RBP20.81■□□□□ 0.92
SNX27-203ENST00000368843 GOLGA6L7A0A1B0GV03 622 aa20.8■□□□□ 0.92
SNX27-203ENST00000368843 CCDC178Q5BJE1 867 aa20.8■□□□□ 0.92
SNX27-203ENST00000368843 CABP5Q9NP86 173 aa20.8■□□□□ 0.92
SNX27-203ENST00000368843 GOLIM4O00461 696 aa20.8■□□□□ 0.92
SNX27-203ENST00000368843 MYO1BO43795 1136 aa20.8■□□□□ 0.92
SNX27-203ENST00000368843 HMGB1P09429 215 aaKnown RBP20.8■□□□□ 0.92
SNX27-203ENST00000368843 PRDM10Q9NQV6 1147 aa20.8■□□□□ 0.92
SNX27-203ENST00000368843 CHRNA2Q15822 529 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 ACSBG1Q96GR2 724 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 SYCE3A1L190 88 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 JARID2Q92833 1246 aaPredicted RBP20.79■□□□□ 0.92
SNX27-203ENST00000368843 PPFIA3O75145 1194 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 HLA-DOAP06340 250 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 BACH2Q9BYV9 841 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 WDR97A6NE52 1622 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 SSH1Q8WYL5 1049 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 PTPN23Q9H3S7 1636 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 ALDH1L2Q3SY69 923 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 LDHAL6AQ6ZMR3 332 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 KAT14Q9H8E8 782 aa20.79■□□□□ 0.92
SNX27-203ENST00000368843 FGFR1OPO95684 399 aaKnown RBP20.78■□□□□ 0.92
SNX27-203ENST00000368843 BAG3O95817 575 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms