RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 USP25Q9UHP3 1055 aa10.77□□□□□ -0.69
THBS3-201ENST00000368378 ZSCAN30Q86W11 494 aa10.76□□□□□ -0.69
THBS3-201ENST00000368378 ADAMTSL3P82987 1691 aa10.76□□□□□ -0.69
THBS3-201ENST00000368378 UBTFL1P0CB47 393 aaPredicted RBP10.76□□□□□ -0.69
THBS3-201ENST00000368378 STK3Q13188 491 aa10.76□□□□□ -0.69
THBS3-201ENST00000368378 HDGFL1Q5TGJ6 251 aa10.76□□□□□ -0.69
THBS3-201ENST00000368378 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
THBS3-201ENST00000368378 EYA1Q99502 592 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 PA2G4Q9UQ80 394 aaKnown RBP10.75□□□□□ -0.69
THBS3-201ENST00000368378 CNPY2Q9Y2B0 182 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 NDUFB9Q9Y6M9 179 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 ATP10DQ9P241 1426 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 DLC1Q96QB1 1528 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 KCNQ3O43525 872 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 MCCP23508 829 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 TTC12Q9H892 705 aaPredicted RBP10.75□□□□□ -0.69
THBS3-201ENST00000368378 CAMK4Q16566 473 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 ABTB2Q8N961 1025 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 NECAB1Q8N987 351 aa10.75□□□□□ -0.69
THBS3-201ENST00000368378 HCLS1P14317 486 aaPredicted RBP10.74□□□□□ -0.69
THBS3-201ENST00000368378 UQCRHLA0A096LP55 91 aa10.74□□□□□ -0.69
THBS3-201ENST00000368378 UQCRHP07919 91 aa10.74□□□□□ -0.69
THBS3-201ENST00000368378 NBPF7P0C2Y1 421 aaPredicted RBP10.74□□□□□ -0.69
THBS3-201ENST00000368378 TAF7Q15545 349 aaPredicted RBP10.74□□□□□ -0.69
THBS3-201ENST00000368378 PPP1R42Q7Z4L9 355 aa10.74□□□□□ -0.69
THBS3-201ENST00000368378 CCDC83Q8IWF9 413 aa10.74□□□□□ -0.69
THBS3-201ENST00000368378 DDX17Q92841 729 aaKnown RBP10.74□□□□□ -0.69
THBS3-201ENST00000368378 BCCIPQ9P287 314 aaKnown RBP eCLIP10.74□□□□□ -0.69
THBS3-201ENST00000368378 RGS12O14924 1447 aa10.74□□□□□ -0.69
THBS3-201ENST00000368378 CEBPZQ03701 1054 aaKnown RBP10.73□□□□□ -0.69
THBS3-201ENST00000368378 MPRIPQ6WCQ1 1025 aa10.73□□□□□ -0.69
THBS3-201ENST00000368378 KLHDC4Q8TBB5 520 aa10.73□□□□□ -0.69
THBS3-201ENST00000368378 ESYT1Q9BSJ8 1104 aa10.73□□□□□ -0.69
THBS3-201ENST00000368378 RRP9O43818 475 aaKnown RBP10.73□□□□□ -0.69
THBS3-201ENST00000368378 GIMAP6Q6P9H5 292 aa10.73□□□□□ -0.69
THBS3-201ENST00000368378 USP48Q86UV5 1035 aa10.73□□□□□ -0.69
THBS3-201ENST00000368378 SIRT1Q96EB6 747 aa10.73□□□□□ -0.69
THBS3-201ENST00000368378 PTPRCP08575 1304 aa10.73□□□□□ -0.69
THBS3-201ENST00000368378 LRRC59Q96AG4 307 aaKnown RBP10.73□□□□□ -0.69
THBS3-201ENST00000368378 SETD1AO15047 1707 aaKnown RBP10.72□□□□□ -0.69
THBS3-201ENST00000368378 CASTP20810 708 aaKnown RBP10.72□□□□□ -0.69
THBS3-201ENST00000368378 NRXN3Q9Y4C0 1643 aa10.72□□□□□ -0.69
THBS3-201ENST00000368378 PRAMEF22A3QJZ6 481 aa10.72□□□□□ -0.69
THBS3-201ENST00000368378 PI4KAP2A4QPH2 592 aa10.72□□□□□ -0.69
THBS3-201ENST00000368378 KDM4AO75164 1064 aa10.72□□□□□ -0.69
THBS3-201ENST00000368378 CHMLP26374 656 aa10.72□□□□□ -0.69
THBS3-201ENST00000368378 PI4KAP1Q8N8J0 262 aa10.72□□□□□ -0.69
THBS3-201ENST00000368378 LGR6Q9HBX8 967 aa10.72□□□□□ -0.69
THBS3-201ENST00000368378 ITSN1Q15811 1721 aa10.72□□□□□ -0.69
THBS3-201ENST00000368378 PRPF40BQ6NWY9 871 aaKnown RBP10.71□□□□□ -0.69
THBS3-201ENST00000368378 CCDC8Q9H0W5 538 aaPredicted RBP10.71□□□□□ -0.69
THBS3-201ENST00000368378 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
THBS3-201ENST00000368378 CHPF2Q9P2E5 772 aa10.71□□□□□ -0.69
THBS3-201ENST00000368378 COL9A3Q14050 684 aaPredicted RBP10.71□□□□□ -0.7
THBS3-201ENST00000368378 CWF19L2Q2TBE0 894 aaKnown RBP10.71□□□□□ -0.7
THBS3-201ENST00000368378 C9orf78Q9NZ63 289 aaPredicted RBP10.71□□□□□ -0.7
THBS3-201ENST00000368378 CEP170BQ9Y4F5 1589 aaPredicted RBP10.7□□□□□ -0.7
THBS3-201ENST00000368378 MON2Q7Z3U7 1717 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 PTMSP20962 102 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 CCT4P50991 539 aaKnown RBP10.7□□□□□ -0.7
THBS3-201ENST00000368378 LARGE1O95461 756 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 MYL6BP14649 208 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 CCDC30Q5VVM6 783 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 EDC3Q96F86 508 aaKnown RBP10.7□□□□□ -0.7
THBS3-201ENST00000368378 JAKMIP1Q96N16 626 aaKnown RBP10.7□□□□□ -0.7
THBS3-201ENST00000368378 TSPY26PQ9H489 355 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 DIAPH3Q9NSV4 1193 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 TFIP11Q9UBB9 837 aaKnown RBP10.7□□□□□ -0.7
THBS3-201ENST00000368378 ZNF330Q9Y3S2 320 aaPredicted RBP10.7□□□□□ -0.7
THBS3-201ENST00000368378 USP6P35125 1406 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 KIF24Q5T7B8 1368 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 KIAA0232Q92628 1395 aa10.7□□□□□ -0.7
THBS3-201ENST00000368378 CHGBP05060 677 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 CKAP2LQ8IYA6 745 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 SMC3Q9UQE7 1217 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 CRB1P82279 1406 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 LRSAM1Q6UWE0 723 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 IL17REQ8NFR9 667 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 LRRC2Q9BYS8 371 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 SRCIN1Q9C0H9 1055 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 USP44Q9H0E7 712 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 ISY1Q9ULR0 285 aaKnown RBP10.69□□□□□ -0.7
THBS3-201ENST00000368378 SOS1Q07889 1333 aaPredicted RBP10.69□□□□□ -0.7
THBS3-201ENST00000368378 AK2P54819 239 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 DNM1Q05193 864 aaKnown RBP10.69□□□□□ -0.7
THBS3-201ENST00000368378 DRC7Q8IY82 874 aa10.69□□□□□ -0.7
THBS3-201ENST00000368378 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 A0A087WWV3 80 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 OVOS2A0A0J9YW53 1432 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 GNAT3A8MTJ3 354 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 OVOS2Q6IE36 1432 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 CNPY4Q8N129 248 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 BOLA2Q9H3K6 86 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 CWC22Q9HCG8 908 aaKnown RBP10.68□□□□□ -0.7
THBS3-201ENST00000368378 TEFQ10587 303 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 ADCK5Q3MIX3 580 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 BBXQ8WY36 941 aaPredicted RBP10.68□□□□□ -0.7
THBS3-201ENST00000368378 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
THBS3-201ENST00000368378 PLEKHG1Q9ULL1 1385 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms