RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
ZNF548-202ENST00000366197 HMGB1P09429 215 aaKnown RBP12.09□□□□□ -0.47
ZNF548-202ENST00000366197 UBE3BQ7Z3V4 1068 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 CEP131Q9UPN4 1083 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 ZNF518AQ6AHZ1 1483 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 NPHP3Q7Z494 1330 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 ZNF213O14771 459 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 C20orf194Q5TEA3 1177 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 RNF41Q9H4P4 317 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-202ENST00000366197 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-202ENST00000366197 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
ZNF548-202ENST00000366197 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-202ENST00000366197 NUP160Q12769 1436 aa12.08□□□□□ -0.47
ZNF548-202ENST00000366197 NOM1Q5C9Z4 860 aaKnown RBP12.08□□□□□ -0.48
ZNF548-202ENST00000366197 CCDC83Q8IWF9 413 aa12.08□□□□□ -0.48
ZNF548-202ENST00000366197 TTC21AQ8NDW8 1320 aa12.08□□□□□ -0.48
ZNF548-202ENST00000366197 WDHD1O75717 1129 aaPredicted RBP12.08□□□□□ -0.48
ZNF548-202ENST00000366197 LDHCP07864 332 aa12.08□□□□□ -0.48
ZNF548-202ENST00000366197 UHRF1BP1LA0JNW5 1464 aa12.08□□□□□ -0.48
ZNF548-202ENST00000366197 FAM83GA6ND36 823 aa12.08□□□□□ -0.48
ZNF548-202ENST00000366197 MCM4P33991 863 aa12.08□□□□□ -0.48
ZNF548-202ENST00000366197 PPP1R42Q7Z4L9 355 aa12.08□□□□□ -0.48
ZNF548-202ENST00000366197 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
ZNF548-202ENST00000366197 A2MP01023 1474 aa12.07□□□□□ -0.48
ZNF548-202ENST00000366197 PATL2C9JE40 543 aaKnown RBP12.07□□□□□ -0.48
ZNF548-202ENST00000366197 CBFA2T2O43439 604 aa12.07□□□□□ -0.48
ZNF548-202ENST00000366197 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
ZNF548-202ENST00000366197 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
ZNF548-202ENST00000366197 TXLNBQ8N3L3 684 aa12.07□□□□□ -0.48
ZNF548-202ENST00000366197 SH2B1Q9NRF2 756 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-202ENST00000366197 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
ZNF548-202ENST00000366197 KDM5BQ9UGL1 1544 aa12.07□□□□□ -0.48
ZNF548-202ENST00000366197 BIVM-ERCC5R4GMW8 1640 aa12.07□□□□□ -0.48
ZNF548-202ENST00000366197 ANKRD36BQ8N2N9 1353 aa12.07□□□□□ -0.48
ZNF548-202ENST00000366197 MBIPQ9NS73 344 aa12.07□□□□□ -0.48
ZNF548-202ENST00000366197 HMGN5P82970 282 aaKnown RBP12.07□□□□□ -0.48
ZNF548-202ENST00000366197 CCDC82Q8N4S0 544 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 ZMYM3Q14202 1370 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 IL16Q14005 1332 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 GPATCH8Q9UKJ3 1502 aaKnown RBP12.06□□□□□ -0.48
ZNF548-202ENST00000366197 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 ADAMTS12P58397 1594 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 EVI5LQ96CN4 794 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 SCAND2PQ9GZW5 306 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-202ENST00000366197 PIK3R4Q99570 1358 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 FBLN1P23142 703 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 RFC4P35249 363 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 TNIP1Q15025 636 aa12.06□□□□□ -0.48
ZNF548-202ENST00000366197 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
ZNF548-202ENST00000366197 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-202ENST00000366197 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
ZNF548-202ENST00000366197 ANXA1P04083 346 aa12.05□□□□□ -0.48
ZNF548-202ENST00000366197 SLC12A7Q9Y666 1083 aa12.05□□□□□ -0.48
ZNF548-202ENST00000366197 TTF1Q15361 905 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-202ENST00000366197 SNRKQ9NRH2 765 aa12.05□□□□□ -0.48
ZNF548-202ENST00000366197 SMTNL1A8MU46 457 aa12.05□□□□□ -0.48
ZNF548-202ENST00000366197 FILIP1Q7Z7B0 1213 aa12.05□□□□□ -0.48
ZNF548-202ENST00000366197 GOLIM4O00461 696 aa12.04□□□□□ -0.48
ZNF548-202ENST00000366197 MAP3K11Q16584 847 aa12.04□□□□□ -0.48
ZNF548-202ENST00000366197 CCDC96Q2M329 555 aa12.04□□□□□ -0.48
ZNF548-202ENST00000366197 C19orf44Q9H6X5 657 aa12.04□□□□□ -0.48
ZNF548-202ENST00000366197 LIMCH1Q9UPQ0 1083 aa12.04□□□□□ -0.48
ZNF548-202ENST00000366197 NUP153P49790 1475 aaKnown RBP12.04□□□□□ -0.48
ZNF548-202ENST00000366197 BAG3O95817 575 aa12.04□□□□□ -0.48
ZNF548-202ENST00000366197 RAB34Q9BZG1 259 aa12.04□□□□□ -0.48
ZNF548-202ENST00000366197 DISP3Q9P2K9 1392 aa12.04□□□□□ -0.48
ZNF548-202ENST00000366197 TRAPPC8Q9Y2L5 1435 aa12.04□□□□□ -0.48
ZNF548-202ENST00000366197 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
ZNF548-202ENST00000366197 KAT6BQ8WYB5 2073 aa12.03□□□□□ -0.48
ZNF548-202ENST00000366197 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
ZNF548-202ENST00000366197 MPNDQ8N594 471 aa12.03□□□□□ -0.48
ZNF548-202ENST00000366197 PPP1R12BO60237 982 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-202ENST00000366197 ERLIN2O94905 339 aa12.03□□□□□ -0.48
ZNF548-202ENST00000366197 NBPF6Q5VWK0 638 aa12.03□□□□□ -0.48
ZNF548-202ENST00000366197 NBPF5PQ86XG9 351 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-202ENST00000366197 NBPF4Q96M43 638 aa12.03□□□□□ -0.48
ZNF548-202ENST00000366197 ABCC10Q5T3U5 1492 aa12.02□□□□□ -0.48
ZNF548-202ENST00000366197 CCDC181Q5TID7 509 aa12.02□□□□□ -0.48
ZNF548-202ENST00000366197 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.48
ZNF548-202ENST00000366197 CCDC194A0A1B0GVG4 234 aa12.02□□□□□ -0.48
ZNF548-202ENST00000366197 CATIPQ7Z7H3 387 aa12.02□□□□□ -0.48
ZNF548-202ENST00000366197 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.48
ZNF548-202ENST00000366197 GRPEL1Q9HAV7 217 aa12.02□□□□□ -0.48
ZNF548-202ENST00000366197 RAPGEF6Q8TEU7 1601 aa12.02□□□□□ -0.49
ZNF548-202ENST00000366197 MATR3P43243 847 aaKnown RBP eCLIP12.02□□□□□ -0.49
ZNF548-202ENST00000366197 CFAP100Q494V2 611 aa12.02□□□□□ -0.49
ZNF548-202ENST00000366197 WDR78Q5VTH9 848 aa12.02□□□□□ -0.49
ZNF548-202ENST00000366197 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
ZNF548-202ENST00000366197 SPTY2D1Q68D10 685 aaPredicted RBP12.02□□□□□ -0.49
ZNF548-202ENST00000366197 GOLGA8AA7E2F4 631 aa12.01□□□□□ -0.49
ZNF548-202ENST00000366197 GOLGA8BA8MQT2 603 aa12.01□□□□□ -0.49
ZNF548-202ENST00000366197 COPS6Q7L5N1 327 aa12.01□□□□□ -0.49
ZNF548-202ENST00000366197 FAM177A1Q8N128 213 aaPredicted RBP12.01□□□□□ -0.49
ZNF548-202ENST00000366197 SEPT11Q9NVA2 429 aaKnown RBP12.01□□□□□ -0.49
ZNF548-202ENST00000366197 UQCRFS1P1P0C7P4 283 aa12.01□□□□□ -0.49
ZNF548-202ENST00000366197 GUCY1B3Q02153 619 aa12.01□□□□□ -0.49
ZNF548-202ENST00000366197 TTLL12Q14166 644 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms