RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
BDNF-202ENST00000356660 CLIP2Q9UDT6 1046 aa14.87□□□□□ -0.03
BDNF-202ENST00000356660 F13A1P00488 732 aa14.87□□□□□ -0.03
BDNF-202ENST00000356660 DDX11Q96FC9 970 aa14.87□□□□□ -0.03
BDNF-202ENST00000356660 INTS4Q96HW7 963 aaKnown RBP14.87□□□□□ -0.03
BDNF-202ENST00000356660 GTPBP4Q9BZE4 634 aaKnown RBP14.87□□□□□ -0.03
BDNF-202ENST00000356660 CEBPAP49715 358 aaPredicted RBP14.86□□□□□ -0.03
BDNF-202ENST00000356660 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.86□□□□□ -0.03
BDNF-202ENST00000356660 NCOA3Q9Y6Q9 1424 aa14.86□□□□□ -0.03
BDNF-202ENST00000356660 SDF4Q9BRK5 362 aa14.86□□□□□ -0.03
BDNF-202ENST00000356660 PYCARDQ9ULZ3 195 aa14.86□□□□□ -0.03
BDNF-202ENST00000356660 CCDC66A2RUB6 948 aa14.86□□□□□ -0.03
BDNF-202ENST00000356660 PPFIA3O75145 1194 aa14.86□□□□□ -0.03
BDNF-202ENST00000356660 CCDC73Q6ZRK6 1079 aa14.86□□□□□ -0.03
BDNF-202ENST00000356660 PDCP20941 246 aa14.85□□□□□ -0.03
BDNF-202ENST00000356660 ZNF165P49910 485 aa14.85□□□□□ -0.03
BDNF-202ENST00000356660 CLEC17AQ6ZS10 378 aa14.85□□□□□ -0.03
BDNF-202ENST00000356660 ANO6Q4KMQ2 910 aa14.85□□□□□ -0.03
BDNF-202ENST00000356660 PTPN14Q15678 1187 aa14.85□□□□□ -0.03
BDNF-202ENST00000356660 FSD1Q9BTV5 496 aa14.85□□□□□ -0.03
BDNF-202ENST00000356660 DACT1Q9NYF0 836 aa14.85□□□□□ -0.03
BDNF-202ENST00000356660 PTPRCP08575 1304 aa14.84□□□□□ -0.03
BDNF-202ENST00000356660 RAB11FIP3O75154 756 aa14.84□□□□□ -0.03
BDNF-202ENST00000356660 DMTNQ08495 405 aa14.84□□□□□ -0.03
BDNF-202ENST00000356660 FLIIQ13045 1269 aa14.84□□□□□ -0.03
BDNF-202ENST00000356660 RNF20Q5VTR2 975 aa14.84□□□□□ -0.03
BDNF-202ENST00000356660 NCKAP5LQ9HCH0 1330 aa14.84□□□□□ -0.03
BDNF-202ENST00000356660 CYP2E1P05181 493 aaPredicted RBP14.84□□□□□ -0.03
BDNF-202ENST00000356660 ANAPC15P60006 121 aa14.84□□□□□ -0.03
BDNF-202ENST00000356660 SMC2O95347 1197 aa14.84□□□□□ -0.03
BDNF-202ENST00000356660 DDX58O95786 925 aaKnown RBP14.84□□□□□ -0.03
BDNF-202ENST00000356660 LRMPQ12912 555 aa14.84□□□□□ -0.03
BDNF-202ENST00000356660 ATP2B3Q16720 1220 aa14.83□□□□□ -0.03
BDNF-202ENST00000356660 TAF3Q5VWG9 929 aa14.83□□□□□ -0.03
BDNF-202ENST00000356660 FAM177A1Q8N128 213 aaPredicted RBP14.83□□□□□ -0.03
BDNF-202ENST00000356660 FAM200AQ8TCP9 573 aa14.83□□□□□ -0.03
BDNF-202ENST00000356660 FOXO3O43524 673 aa14.83□□□□□ -0.04
BDNF-202ENST00000356660 MNS1Q8NEH6 495 aa14.83□□□□□ -0.04
BDNF-202ENST00000356660 SIL1Q9H173 461 aa14.83□□□□□ -0.04
BDNF-202ENST00000356660 TTC37Q6PGP7 1564 aa14.83□□□□□ -0.04
BDNF-202ENST00000356660 PNMA6EA0A0J9YXQ4 647 aa14.82□□□□□ -0.04
BDNF-202ENST00000356660 KIF20AO95235 890 aa14.82□□□□□ -0.04
BDNF-202ENST00000356660 TPM4P67936 248 aa14.82□□□□□ -0.04
BDNF-202ENST00000356660 BLOC1S2Q6QNY1 142 aa14.82□□□□□ -0.04
BDNF-202ENST00000356660 DNAJC25Q9H1X3 360 aa14.82□□□□□ -0.04
BDNF-202ENST00000356660 ADGRL1O94910 1474 aa14.82□□□□□ -0.04
BDNF-202ENST00000356660 KINO60870 393 aaKnown RBP14.82□□□□□ -0.04
BDNF-202ENST00000356660 IRX3P78415 501 aaPredicted RBP14.82□□□□□ -0.04
BDNF-202ENST00000356660 TYRO3Q06418 890 aa14.82□□□□□ -0.04
BDNF-202ENST00000356660 IPO4Q8TEX9 1081 aaKnown RBP14.82□□□□□ -0.04
BDNF-202ENST00000356660 HSP90AB2PQ58FF8 381 aa14.82□□□□□ -0.04
BDNF-202ENST00000356660 PPP1R42Q7Z4L9 355 aa14.82□□□□□ -0.04
BDNF-202ENST00000356660 SBNO2Q9Y2G9 1366 aa14.81□□□□□ -0.04
BDNF-202ENST00000356660 CEP135Q66GS9 1140 aa14.81□□□□□ -0.04
BDNF-202ENST00000356660 UNC5CLQ8IV45 518 aa14.81□□□□□ -0.04
BDNF-202ENST00000356660 USHBP1Q8N6Y0 703 aa14.81□□□□□ -0.04
BDNF-202ENST00000356660 PSMA5P28066 241 aa14.81□□□□□ -0.04
BDNF-202ENST00000356660 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
BDNF-202ENST00000356660 HSP90AB4PQ58FF6 505 aa14.81□□□□□ -0.04
BDNF-202ENST00000356660 ZSCAN31Q96LW9 406 aaPredicted RBP14.81□□□□□ -0.04
BDNF-202ENST00000356660 ZNF530Q6P9A1 599 aaPredicted RBP14.8□□□□□ -0.04
BDNF-202ENST00000356660 FANCAO15360 1455 aa14.8□□□□□ -0.04
BDNF-202ENST00000356660 ATF3P18847 181 aa14.8□□□□□ -0.04
BDNF-202ENST00000356660 PROSER2Q86WR7 435 aaPredicted RBP14.8□□□□□ -0.04
BDNF-202ENST00000356660 KIF1BPQ96EK5 621 aa14.8□□□□□ -0.04
BDNF-202ENST00000356660 ME1P48163 572 aa14.8□□□□□ -0.04
BDNF-202ENST00000356660 AACSQ86V21 672 aa14.8□□□□□ -0.04
BDNF-202ENST00000356660 ABCA8O94911 1581 aa14.8□□□□□ -0.04
BDNF-202ENST00000356660 RTL1A6NKG5 1358 aa14.8□□□□□ -0.04
BDNF-202ENST00000356660 ANXA1P04083 346 aa14.79□□□□□ -0.04
BDNF-202ENST00000356660 IL13P35225 146 aa14.79□□□□□ -0.04
BDNF-202ENST00000356660 ZBTB9Q96C00 473 aa14.79□□□□□ -0.04
BDNF-202ENST00000356660 PPP6R1Q9UPN7 881 aa14.79□□□□□ -0.04
BDNF-202ENST00000356660 POLR3GO15318 223 aaPredicted RBP14.79□□□□□ -0.04
BDNF-202ENST00000356660 MYL6BP14649 208 aa14.79□□□□□ -0.04
BDNF-202ENST00000356660 TEX35Q5T0J7 233 aa14.79□□□□□ -0.04
BDNF-202ENST00000356660 RHPN1Q8TCX5 695 aa14.79□□□□□ -0.04
BDNF-202ENST00000356660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.79□□□□□ -0.04
BDNF-202ENST00000356660 SCAND2PQ9GZW5 306 aaPredicted RBP14.78□□□□□ -0.04
BDNF-202ENST00000356660 MADDQ8WXG6 1647 aa14.78□□□□□ -0.04
BDNF-202ENST00000356660 ATP8B2P98198 1209 aa14.78□□□□□ -0.04
BDNF-202ENST00000356660 GUCY1B3Q02153 619 aa14.78□□□□□ -0.04
BDNF-202ENST00000356660 TAF7Q15545 349 aaPredicted RBP14.78□□□□□ -0.04
BDNF-202ENST00000356660 KIF18AQ8NI77 898 aa14.78□□□□□ -0.04
BDNF-202ENST00000356660 SNX14Q9Y5W7 946 aa14.78□□□□□ -0.04
BDNF-202ENST00000356660 BOLA2Q9H3K6 86 aa14.77□□□□□ -0.04
BDNF-202ENST00000356660 NRBP1Q9UHY1 535 aa14.77□□□□□ -0.04
BDNF-202ENST00000356660 SKILP12757 684 aa14.77□□□□□ -0.04
BDNF-202ENST00000356660 NAA30Q147X3 362 aaPredicted RBP14.77□□□□□ -0.04
BDNF-202ENST00000356660 PUS7Q96PZ0 661 aaKnown RBP14.77□□□□□ -0.04
BDNF-202ENST00000356660 CCDC8Q9H0W5 538 aaPredicted RBP14.77□□□□□ -0.04
BDNF-202ENST00000356660 OGFRQ9NZT2 677 aa14.77□□□□□ -0.04
BDNF-202ENST00000356660 GLRX3O76003 335 aaKnown RBP14.77□□□□□ -0.05
BDNF-202ENST00000356660 CUL4AQ13619 759 aa14.77□□□□□ -0.05
BDNF-202ENST00000356660 EIF4A2Q14240 407 aaKnown RBP14.77□□□□□ -0.05
BDNF-202ENST00000356660 UTP14CQ5TAP6 766 aaKnown RBP14.77□□□□□ -0.05
BDNF-202ENST00000356660 HOMEZQ8IX15 550 aa14.77□□□□□ -0.05
BDNF-202ENST00000356660 KRT222Q8N1A0 295 aa14.77□□□□□ -0.05
BDNF-202ENST00000356660 SH2B1Q9NRF2 756 aaPredicted RBP14.77□□□□□ -0.05
BDNF-202ENST00000356660 ARGLU1Q9NWB6 273 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms