RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 C2CD5Q86YS7 1000 aa21.9■■□□□ 1.1
DDX55-202ENST00000354291 ZNF831Q5JPB2 1677 aa21.89■■□□□ 1.1
DDX55-202ENST00000354291 NFKBIEO00221 500 aa21.89■■□□□ 1.09
DDX55-202ENST00000354291 C1orf141Q5JVX7 400 aa21.89■■□□□ 1.09
DDX55-202ENST00000354291 CHADLQ6NUI6 762 aa21.89■■□□□ 1.09
DDX55-202ENST00000354291 H0YIN7 160 aa21.88■■□□□ 1.09
DDX55-202ENST00000354291 SERPINB2P05120 415 aa21.88■■□□□ 1.09
DDX55-202ENST00000354291 AMOTQ4VCS5 1084 aa21.88■■□□□ 1.09
DDX55-202ENST00000354291 ZNF219Q9P2Y4 722 aaPredicted RBP21.88■■□□□ 1.09
DDX55-202ENST00000354291 DNAJC10Q8IXB1 793 aa21.87■■□□□ 1.09
DDX55-202ENST00000354291 PRDM10Q9NQV6 1147 aa21.87■■□□□ 1.09
DDX55-202ENST00000354291 ERFEQ4G0M1 354 aa21.86■■□□□ 1.09
DDX55-202ENST00000354291 AIDAQ96BJ3 306 aa21.86■■□□□ 1.09
DDX55-202ENST00000354291 POTEIP0CG38 1075 aa21.85■■□□□ 1.09
DDX55-202ENST00000354291 POTEJP0CG39 1038 aa21.85■■□□□ 1.09
DDX55-202ENST00000354291 CTCFP49711 727 aaPredicted RBP21.84■■□□□ 1.09
DDX55-202ENST00000354291 ZNF622Q969S3 477 aaKnown RBP eCLIP21.84■■□□□ 1.091e-9■■□□□ 11.9
DDX55-202ENST00000354291 NARFQ9UHQ1 456 aa21.84■■□□□ 1.09
DDX55-202ENST00000354291 SOS1Q07889 1333 aaPredicted RBP21.83■■□□□ 1.09
DDX55-202ENST00000354291 C21orf2O43822 256 aa21.82■■□□□ 1.08
DDX55-202ENST00000354291 BICDL1Q6ZP65 573 aa21.82■■□□□ 1.08
DDX55-202ENST00000354291 DDNO94850 711 aaPredicted RBP21.81■■□□□ 1.08
DDX55-202ENST00000354291 AEBP1Q8IUX7 1158 aa21.81■■□□□ 1.08
DDX55-202ENST00000354291 CNTNAP1P78357 1384 aa21.81■■□□□ 1.08
DDX55-202ENST00000354291 CCDC88AQ3V6T2 1871 aa21.8■■□□□ 1.08
DDX55-202ENST00000354291 CYP19A1P11511 503 aaPredicted RBP21.8■■□□□ 1.08
DDX55-202ENST00000354291 VEGFBP49765 207 aa21.8■■□□□ 1.08
DDX55-202ENST00000354291 LBX1P52954 281 aa21.8■■□□□ 1.08
DDX55-202ENST00000354291 BCL2L12Q9HB09 334 aa21.8■■□□□ 1.08
DDX55-202ENST00000354291 ANKRD26Q9UPS8 1709 aa21.79■■□□□ 1.08
DDX55-202ENST00000354291 FAM161AQ3B820 660 aa21.78■■□□□ 1.08
DDX55-202ENST00000354291 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
DDX55-202ENST00000354291 ZBTB1Q9Y2K1 713 aa21.78■■□□□ 1.08
DDX55-202ENST00000354291 SLC39A6Q13433 755 aa21.77■■□□□ 1.08
DDX55-202ENST00000354291 COL15A1P39059 1388 aa21.76■■□□□ 1.07
DDX55-202ENST00000354291 CARMIL3Q8ND23 1372 aa21.76■■□□□ 1.07
DDX55-202ENST00000354291 SULT6B1Q6IMI4 303 aa21.76■■□□□ 1.07
DDX55-202ENST00000354291 TIAM2Q8IVF5 1701 aa21.76■■□□□ 1.07
DDX55-202ENST00000354291 CCDC24Q8N4L8 307 aa21.76■■□□□ 1.07
DDX55-202ENST00000354291 AFDNP55196 1824 aaKnown RBP21.76■■□□□ 1.07
DDX55-202ENST00000354291 TMEM88BA6NKF7 163 aa21.75■■□□□ 1.07
DDX55-202ENST00000354291 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
DDX55-202ENST00000354291 ABHD8Q96I13 439 aa21.75■■□□□ 1.07
DDX55-202ENST00000354291 TAOK3Q9H2K8 898 aa21.75■■□□□ 1.07
DDX55-202ENST00000354291 WBP1LQ9NX94 342 aa21.75■■□□□ 1.07
DDX55-202ENST00000354291 TJP1Q07157 1748 aa21.75■■□□□ 1.07
DDX55-202ENST00000354291 PDE6BP35913 854 aa21.74■■□□□ 1.07
DDX55-202ENST00000354291 LDHDQ86WU2 507 aa21.74■■□□□ 1.07
DDX55-202ENST00000354291 SLC52A2Q9HAB3 445 aa21.74■■□□□ 1.07
DDX55-202ENST00000354291 LGR6Q9HBX8 967 aa21.74■■□□□ 1.07
DDX55-202ENST00000354291 PASKQ96RG2 1323 aa21.74■■□□□ 1.07
DDX55-202ENST00000354291 ADAMTS7Q9UKP4 1686 aa21.73■■□□□ 1.07
DDX55-202ENST00000354291 BRIP1Q9BX63 1249 aa21.73■■□□□ 1.07
DDX55-202ENST00000354291 IQCA1LA6NCM1 817 aa21.72■■□□□ 1.07
DDX55-202ENST00000354291 EAPPQ56P03 285 aaPredicted RBP21.72■■□□□ 1.07
DDX55-202ENST00000354291 PDZRN3Q9UPQ7 1066 aa21.72■■□□□ 1.07
DDX55-202ENST00000354291 CLEC11AQ9Y240 323 aa21.72■■□□□ 1.07
DDX55-202ENST00000354291 AKAP4Q5JQC9 854 aa21.71■■□□□ 1.07
DDX55-202ENST00000354291 TBC1D9BQ66K14 1250 aa21.71■■□□□ 1.07
DDX55-202ENST00000354291 TAF1DQ9H5J8 278 aaPredicted RBP21.71■■□□□ 1.07
DDX55-202ENST00000354291 ITGBL1O95965 494 aaPredicted RBP21.69■■□□□ 1.06
DDX55-202ENST00000354291 HSPA8P11142 646 aaKnown RBP21.69■■□□□ 1.06
DDX55-202ENST00000354291 DEFB115Q30KQ5 88 aa21.69■■□□□ 1.06
DDX55-202ENST00000354291 LTBP3Q9NS15 1303 aa21.69■■□□□ 1.06
DDX55-202ENST00000354291 NRXN2Q9P2S2 1712 aa21.69■■□□□ 1.06
DDX55-202ENST00000354291 CCDC85CA6NKD9 419 aa21.68■■□□□ 1.06
DDX55-202ENST00000354291 NPHP1O15259 732 aa21.68■■□□□ 1.06
DDX55-202ENST00000354291 PRR5LQ6MZQ0 368 aa21.68■■□□□ 1.06
DDX55-202ENST00000354291 CNKSR1Q969H4 720 aa21.68■■□□□ 1.06
DDX55-202ENST00000354291 DLEC1Q9Y238 1755 aa21.68■■□□□ 1.06
DDX55-202ENST00000354291 A0A087WZG4 1122 aa21.67■■□□□ 1.06
DDX55-202ENST00000354291 RNMTO43148 476 aaKnown RBP21.67■■□□□ 1.06
DDX55-202ENST00000354291 MLLT1Q03111 559 aaPredicted RBP21.67■■□□□ 1.06
DDX55-202ENST00000354291 ZNF330Q9Y3S2 320 aaPredicted RBP21.67■■□□□ 1.06
DDX55-202ENST00000354291 STARD3NLO95772 234 aa21.66■■□□□ 1.06
DDX55-202ENST00000354291 EIF5P55010 431 aaKnown RBP21.66■■□□□ 1.06
DDX55-202ENST00000354291 TBC1D2BQ9UPU7 963 aa21.66■■□□□ 1.06
DDX55-202ENST00000354291 MAP2K1Q02750 393 aaPredicted RBP21.65■■□□□ 1.06
DDX55-202ENST00000354291 PRPF40BQ6NWY9 871 aaKnown RBP21.65■■□□□ 1.06
DDX55-202ENST00000354291 VSIG10Q8N0Z9 540 aa21.65■■□□□ 1.06
DDX55-202ENST00000354291 L3MBTL3Q96JM7 780 aaPredicted RBP21.65■■□□□ 1.06
DDX55-202ENST00000354291 WDR33Q9C0J8 1336 aaKnown RBP21.64■■□□□ 1.05
DDX55-202ENST00000354291 SOGA3Q5TF21 947 aa21.64■■□□□ 1.05
DDX55-202ENST00000354291 MORC1Q86VD1 984 aa21.64■■□□□ 1.05
DDX55-202ENST00000354291 TIMELESSQ9UNS1 1208 aa21.64■■□□□ 1.05
DDX55-202ENST00000354291 DICER1Q9UPY3 1922 aaKnown RBP21.63■■□□□ 1.05
DDX55-202ENST00000354291 MAP1SQ66K74 1059 aaPredicted RBP21.63■■□□□ 1.05
DDX55-202ENST00000354291 STYK1Q6J9G0 422 aa21.63■■□□□ 1.05
DDX55-202ENST00000354291 CNTROBQ8N137 903 aa21.63■■□□□ 1.05
DDX55-202ENST00000354291 PCDH10Q9P2E7 1040 aa21.63■■□□□ 1.05
DDX55-202ENST00000354291 HACL1Q9UJ83 578 aa21.63■■□□□ 1.05
DDX55-202ENST00000354291 ABT1Q9ULW3 272 aaKnown RBP21.63■■□□□ 1.05
DDX55-202ENST00000354291 RASSF10A6NK89 507 aa21.62■■□□□ 1.05
DDX55-202ENST00000354291 IL13P35225 146 aa21.62■■□□□ 1.05
DDX55-202ENST00000354291 CNBD1Q8NA66 436 aa21.62■■□□□ 1.05
DDX55-202ENST00000354291 SETDB2Q96T68 719 aa21.62■■□□□ 1.05
DDX55-202ENST00000354291 FER1L6Q2WGJ9 1857 aa21.62■■□□□ 1.05
DDX55-202ENST00000354291 CLSPNQ9HAW4 1339 aa21.61■■□□□ 1.05
DDX55-202ENST00000354291 SRGNP10124 158 aa21.61■■□□□ 1.05
DDX55-202ENST00000354291 EPHX2P34913 555 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms