RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
CLCN6-202ENST00000346436 MAGI2Q86UL8 1455 aa12.85□□□□□ -0.35
CLCN6-202ENST00000346436 METTL24Q5JXM2 366 aa12.85□□□□□ -0.35
CLCN6-202ENST00000346436 TRIM22Q8IYM9 498 aa12.85□□□□□ -0.35
CLCN6-202ENST00000346436 MBD3O95983 291 aa12.85□□□□□ -0.35
CLCN6-202ENST00000346436 ANKRD36BQ8N2N9 1353 aa12.84□□□□□ -0.35
CLCN6-202ENST00000346436 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
CLCN6-202ENST00000346436 TDO2P48775 406 aa12.84□□□□□ -0.35
CLCN6-202ENST00000346436 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-202ENST00000346436 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
CLCN6-202ENST00000346436 OFD1O75665 1012 aa12.84□□□□□ -0.35
CLCN6-202ENST00000346436 AEBP1Q8IUX7 1158 aa12.84□□□□□ -0.35
CLCN6-202ENST00000346436 CEP170Q5SW79 1584 aa12.84□□□□□ -0.35
CLCN6-202ENST00000346436 SLC5A1P13866 664 aa12.84□□□□□ -0.35
CLCN6-202ENST00000346436 CTNNA3Q9UI47 895 aa12.83□□□□□ -0.35
CLCN6-202ENST00000346436 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.35
CLCN6-202ENST00000346436 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.35
CLCN6-202ENST00000346436 BCORL1Q5H9F3 1711 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 MX1P20591 662 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 ZNF772Q68DY9 489 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-202ENST00000346436 SETDB2Q96T68 719 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 MEIS3Q99687 375 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 HLA-DOAP06340 250 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 SYCP1Q15431 976 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-202ENST00000346436 ZFYVE27Q5T4F4 411 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 UBAC1Q9BSL1 405 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 NYXQ9GZU5 481 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 ABCF2Q9UG63 623 aa12.83□□□□□ -0.36
CLCN6-202ENST00000346436 RTCBQ9Y3I0 505 aaKnown RBP12.83□□□□□ -0.36
CLCN6-202ENST00000346436 MCM2P49736 904 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 ANKRD18BA2A2Z9 1011 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 CCDC69A6NI79 296 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 B4DLN1 442 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 BAG4O95429 457 aaKnown RBP12.82□□□□□ -0.36
CLCN6-202ENST00000346436 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
CLCN6-202ENST00000346436 IFIT5Q13325 482 aaKnown RBP12.82□□□□□ -0.36
CLCN6-202ENST00000346436 GPR162Q16538 588 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
CLCN6-202ENST00000346436 ZCRB1Q8TBF4 217 aaKnown RBP12.82□□□□□ -0.36
CLCN6-202ENST00000346436 LRRFIP2Q9Y608 721 aaKnown RBP12.82□□□□□ -0.36
CLCN6-202ENST00000346436 NSD2O96028 1365 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 A0A1W2PP64 1363 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 SASS6Q6UVJ0 657 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 ZBTB40Q9NUA8 1239 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
CLCN6-202ENST00000346436 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
CLCN6-202ENST00000346436 EYA3Q99504 573 aa12.81□□□□□ -0.36
CLCN6-202ENST00000346436 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
CLCN6-202ENST00000346436 TTC22Q5TAA0 569 aa12.81□□□□□ -0.36
CLCN6-202ENST00000346436 GOLGA6L1Q8N7Z2 621 aa12.81□□□□□ -0.36
CLCN6-202ENST00000346436 CUL5Q93034 780 aa12.81□□□□□ -0.36
CLCN6-202ENST00000346436 JAKMIP1Q96N16 626 aaKnown RBP12.81□□□□□ -0.36
CLCN6-202ENST00000346436 BIN2Q9UBW5 565 aaPredicted RBP12.81□□□□□ -0.36
CLCN6-202ENST00000346436 SDSP20132 328 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 AACSQ86V21 672 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 MAST1Q9Y2H9 1570 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 IBSPP21815 317 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-202ENST00000346436 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 CCDC73Q6ZRK6 1079 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 ANKRD24Q8TF21 1146 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 CHMP4BP1P59074 171 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 TRAF1Q13077 416 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 BMP2KQ9NSY1 1161 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-202ENST00000346436 IL16Q14005 1332 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 ZNF518AQ6AHZ1 1483 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 PRKCSHP14314 528 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-202ENST00000346436 CASTP20810 708 aaKnown RBP12.8□□□□□ -0.36
CLCN6-202ENST00000346436 AIDAQ96BJ3 306 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 MKNK2Q9HBH9 465 aa12.8□□□□□ -0.36
CLCN6-202ENST00000346436 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
CLCN6-202ENST00000346436 VAMP4O75379 141 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 BAG3O95817 575 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLCN6-202ENST00000346436 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 GSTO1P78417 241 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-202ENST00000346436 CHRNA2Q15822 529 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 PDCL3Q9H2J4 239 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 NOL7Q9UMY1 257 aaKnown RBP12.79□□□□□ -0.36
CLCN6-202ENST00000346436 CYP46A1Q9Y6A2 500 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 WDR7Q9Y4E6 1490 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 MBD5Q9P267 1494 aa12.79□□□□□ -0.36
CLCN6-202ENST00000346436 CFAP65Q6ZU64 1925 aaKnown RBP12.79□□□□□ -0.36
CLCN6-202ENST00000346436 PIP4K2AP48426 406 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-202ENST00000346436 ZSCAN30Q86W11 494 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 CCDC83Q8IWF9 413 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 TRIM5Q9C035 493 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 UQCRHLA0A096LP55 91 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 UQCRHP07919 91 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 MATR3P43243 847 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLCN6-202ENST00000346436 SEC63Q9UGP8 760 aaKnown RBP12.78□□□□□ -0.36
CLCN6-202ENST00000346436 ANXA1P04083 346 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 IL2RBP14784 551 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 NLRP3Q96P20 1036 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms