RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 U2AF2P26368 475 aaKnown RBP eCLIP18.17■□□□□ 0.57e-7■■■□□ 18.5
SRPK1-201ENST00000346162 SART3Q15020 963 aaKnown RBP18.17■□□□□ 0.5
SRPK1-201ENST00000346162 CTR9Q6PD62 1173 aa18.17■□□□□ 0.5
SRPK1-201ENST00000346162 TXLNBQ8N3L3 684 aa18.17■□□□□ 0.5
SRPK1-201ENST00000346162 MNAT1P51948 309 aa18.17■□□□□ 0.5
SRPK1-201ENST00000346162 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
SRPK1-201ENST00000346162 RASSF4Q9H2L5 321 aa18.17■□□□□ 0.5
SRPK1-201ENST00000346162 IBSPP21815 317 aaPredicted RBP18.16■□□□□ 0.5
SRPK1-201ENST00000346162 C10orf67Q8IYJ2 551 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 PLCD4Q9BRC7 762 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 TNRQ92752 1358 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 CASTP20810 708 aaKnown RBP18.16■□□□□ 0.5
SRPK1-201ENST00000346162 CCDC183Q5T5S1 534 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 C8orf58Q8NAV2 365 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 ANKRD20A12PQ8NF67 263 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 ZRANB1Q9UGI0 708 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 ABCC2Q92887 1545 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 KDM4AO75164 1064 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
SRPK1-201ENST00000346162 TTLL5Q6EMB2 1281 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 PAXBP1Q9Y5B6 917 aa18.16■□□□□ 0.5
SRPK1-201ENST00000346162 SPATA31E1Q6ZUB1 1445 aa18.15■□□□□ 0.5
SRPK1-201ENST00000346162 MYRIPQ8NFW9 859 aa18.15■□□□□ 0.5
SRPK1-201ENST00000346162 ZNF396Q96N95 335 aaPredicted RBP18.15■□□□□ 0.5
SRPK1-201ENST00000346162 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.15■□□□□ 0.53e-7■□□□□ 10.1
SRPK1-201ENST00000346162 NUP62CLQ9H1M0 184 aa18.15■□□□□ 0.5
SRPK1-201ENST00000346162 KRT32Q14532 448 aa18.15■□□□□ 0.5
SRPK1-201ENST00000346162 STK38Q15208 465 aa18.14■□□□□ 0.5
SRPK1-201ENST00000346162 PBRM1Q86U86 1689 aa18.14■□□□□ 0.49
SRPK1-201ENST00000346162 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.49
SRPK1-201ENST00000346162 UTP14CQ5TAP6 766 aaKnown RBP18.14■□□□□ 0.49
SRPK1-201ENST00000346162 TRMT1Q9NXH9 659 aaKnown RBP18.14■□□□□ 0.49
SRPK1-201ENST00000346162 SEC24BO95487 1268 aa18.14■□□□□ 0.49
SRPK1-201ENST00000346162 MEIS3Q99687 375 aa18.14■□□□□ 0.49
SRPK1-201ENST00000346162 PPIP5K1Q6PFW1 1433 aa18.14■□□□□ 0.49
SRPK1-201ENST00000346162 XBP1P17861 261 aa18.14■□□□□ 0.49
SRPK1-201ENST00000346162 ATP2B1P20020 1258 aa18.14■□□□□ 0.49
SRPK1-201ENST00000346162 UVSSAQ2YD98 709 aa18.14■□□□□ 0.49
SRPK1-201ENST00000346162 MRPL50Q8N5N7 158 aaKnown RBP18.14■□□□□ 0.49
SRPK1-201ENST00000346162 BOLA2Q9H3K6 86 aa18.14■□□□□ 0.49
SRPK1-201ENST00000346162 A0A1W2PP64 1363 aa18.13■□□□□ 0.49
SRPK1-201ENST00000346162 RAD21O60216 631 aa18.13■□□□□ 0.49
SRPK1-201ENST00000346162 RRP12Q5JTH9 1297 aaKnown RBP18.13■□□□□ 0.49
SRPK1-201ENST00000346162 CCDC47Q96A33 483 aaKnown RBP18.13■□□□□ 0.49
SRPK1-201ENST00000346162 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
SRPK1-201ENST00000346162 GABPB1Q06547 395 aaPredicted RBP18.13■□□□□ 0.49
SRPK1-201ENST00000346162 TTC22Q5TAA0 569 aa18.13■□□□□ 0.49
SRPK1-201ENST00000346162 PRPF40BQ6NWY9 871 aaKnown RBP18.13■□□□□ 0.49
SRPK1-201ENST00000346162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.13■□□□□ 0.49
SRPK1-201ENST00000346162 HCLS1P14317 486 aaPredicted RBP18.12■□□□□ 0.49
SRPK1-201ENST00000346162 RIMS2Q9UQ26 1411 aa18.12■□□□□ 0.49
SRPK1-201ENST00000346162 VAMP4O75379 141 aa18.12■□□□□ 0.49
SRPK1-201ENST00000346162 EIF4A2Q14240 407 aaKnown RBP18.12■□□□□ 0.49
SRPK1-201ENST00000346162 MAP3K11Q16584 847 aa18.12■□□□□ 0.49
SRPK1-201ENST00000346162 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
SRPK1-201ENST00000346162 URI1O94763 535 aaPredicted RBP18.11■□□□□ 0.49
SRPK1-201ENST00000346162 TSC1Q92574 1164 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 MYD88Q99836 296 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 PI4KAP2A4QPH2 592 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 OLFM4Q6UX06 510 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 PI4KAP1Q8N8J0 262 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 GDPD2Q9HCC8 539 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 RNF123Q5XPI4 1314 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 TSPYL6Q8N831 410 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 TTC21AQ8NDW8 1320 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 CEP135Q66GS9 1140 aa18.11■□□□□ 0.49
SRPK1-201ENST00000346162 CCDC85AQ96PX6 553 aaPredicted RBP18.11■□□□□ 0.49
SRPK1-201ENST00000346162 ANKRD44Q8N8A2 993 aa18.1■□□□□ 0.49
SRPK1-201ENST00000346162 CCDC8Q9H0W5 538 aaPredicted RBP18.1■□□□□ 0.49
SRPK1-201ENST00000346162 BRMS1Q9HCU9 246 aa18.1■□□□□ 0.49
SRPK1-201ENST00000346162 HYPKQ9NX55 129 aa18.1■□□□□ 0.49
SRPK1-201ENST00000346162 ME1P48163 572 aa18.1■□□□□ 0.49
SRPK1-201ENST00000346162 CCDC83Q8IWF9 413 aa18.1■□□□□ 0.49
SRPK1-201ENST00000346162 DHX37Q8IY37 1157 aaKnown RBP18.1■□□□□ 0.49
SRPK1-201ENST00000346162 TSHZ3Q63HK5 1081 aa18.1■□□□□ 0.49
SRPK1-201ENST00000346162 PPP1R42Q7Z4L9 355 aa18.1■□□□□ 0.49
SRPK1-201ENST00000346162 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.1■□□□□ 0.49
SRPK1-201ENST00000346162 V9GYY5 206 aaPredicted RBP18.1■□□□□ 0.49
SRPK1-201ENST00000346162 SPATA32Q96LK8 384 aa18.09■□□□□ 0.49
SRPK1-201ENST00000346162 MPHOSPH8Q99549 860 aa18.09■□□□□ 0.49
SRPK1-201ENST00000346162 CLIP2Q9UDT6 1046 aa18.09■□□□□ 0.49
SRPK1-201ENST00000346162 CTNNA3Q9UI47 895 aa18.09■□□□□ 0.49
SRPK1-201ENST00000346162 CT47A1Q5JQC4 288 aaPredicted RBP18.09■□□□□ 0.49
SRPK1-201ENST00000346162 RAB3GAP1Q15042 981 aa18.09■□□□□ 0.49
SRPK1-201ENST00000346162 FERMT3Q86UX7 667 aa18.09■□□□□ 0.49
SRPK1-201ENST00000346162 CAGE1Q8TC20 777 aa18.09■□□□□ 0.49
SRPK1-201ENST00000346162 PCMTD1Q96MG8 357 aaPredicted RBP18.09■□□□□ 0.49
SRPK1-201ENST00000346162 ZBTB40Q9NUA8 1239 aa18.09■□□□□ 0.49
SRPK1-201ENST00000346162 CAMK4Q16566 473 aa18.08■□□□□ 0.49
SRPK1-201ENST00000346162 FAM107BQ9H098 131 aa18.08■□□□□ 0.49
SRPK1-201ENST00000346162 PIK3R4Q99570 1358 aa18.08■□□□□ 0.49
SRPK1-201ENST00000346162 ANXA1P04083 346 aa18.08■□□□□ 0.48
SRPK1-201ENST00000346162 TDO2P48775 406 aa18.08■□□□□ 0.48
SRPK1-201ENST00000346162 GCC2Q8IWJ2 1684 aa18.08■□□□□ 0.48
SRPK1-201ENST00000346162 SDSP20132 328 aa18.08■□□□□ 0.48
SRPK1-201ENST00000346162 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
SRPK1-201ENST00000346162 ECHDC1Q9NTX5 307 aa18.08■□□□□ 0.48
SRPK1-201ENST00000346162 SMC5Q8IY18 1101 aa18.07■□□□□ 0.48
SRPK1-201ENST00000346162 JMYQ8N9B5 988 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms