RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 CEP85Q6P2H3 762 aa19.1■□□□□ 0.65
CLCN2-202ENST00000344937 LARP6Q9BRS8 491 aaKnown RBP19.09■□□□□ 0.65
CLCN2-202ENST00000344937 STRCQ7RTU9 1775 aa19.09■□□□□ 0.65
CLCN2-202ENST00000344937 ZNF428Q96B54 188 aa19.09■□□□□ 0.65
CLCN2-202ENST00000344937 UPF3BQ9BZI7 483 aaKnown RBP19.09■□□□□ 0.65
CLCN2-202ENST00000344937 RGPD2P0DJD1 1756 aa19.09■□□□□ 0.65
CLCN2-202ENST00000344937 CRB1P82279 1406 aa19.09■□□□□ 0.65
CLCN2-202ENST00000344937 MSH6P52701 1360 aa19.09■□□□□ 0.65
CLCN2-202ENST00000344937 TSPYL4Q9UJ04 414 aa19.09■□□□□ 0.65
CLCN2-202ENST00000344937 RTL1A6NKG5 1358 aa19.08■□□□□ 0.65
CLCN2-202ENST00000344937 PTMSP20962 102 aa19.08■□□□□ 0.65
CLCN2-202ENST00000344937 GNAT3A8MTJ3 354 aa19.08■□□□□ 0.64
CLCN2-202ENST00000344937 G2E3Q7L622 706 aa19.08■□□□□ 0.64
CLCN2-202ENST00000344937 BBXQ8WY36 941 aaPredicted RBP19.08■□□□□ 0.64
CLCN2-202ENST00000344937 TRPM3Q9HCF6 1732 aaPredicted RBP19.08■□□□□ 0.64
CLCN2-202ENST00000344937 IL17REQ8NFR9 667 aa19.07■□□□□ 0.64
CLCN2-202ENST00000344937 ZDHHC9Q9Y397 364 aa19.07■□□□□ 0.64
CLCN2-202ENST00000344937 ANKRD44Q8N8A2 993 aa19.07■□□□□ 0.64
CLCN2-202ENST00000344937 ANKRD24Q8TF21 1146 aa19.07■□□□□ 0.64
CLCN2-202ENST00000344937 ANO2Q9NQ90 1003 aa19.07■□□□□ 0.64
CLCN2-202ENST00000344937 TMEM63CQ9P1W3 806 aa19.07■□□□□ 0.64
CLCN2-202ENST00000344937 PTMAP06454 111 aaKnown RBP19.07■□□□□ 0.64
CLCN2-202ENST00000344937 DMTNQ08495 405 aa19.07■□□□□ 0.64
CLCN2-202ENST00000344937 MAP4K4O95819 1239 aaPredicted RBP19.06■□□□□ 0.64
CLCN2-202ENST00000344937 BCL11BQ9C0K0 894 aaPredicted RBP19.06■□□□□ 0.64
CLCN2-202ENST00000344937 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
CLCN2-202ENST00000344937 PLCB2Q00722 1185 aa19.05■□□□□ 0.64
CLCN2-202ENST00000344937 UTP14CQ5TAP6 766 aaKnown RBP19.05■□□□□ 0.64
CLCN2-202ENST00000344937 GTF2E1P29083 439 aaPredicted RBP19.04■□□□□ 0.64
CLCN2-202ENST00000344937 REC8O95072 547 aa19.04■□□□□ 0.64
CLCN2-202ENST00000344937 ZSCAN20P17040 1043 aaPredicted RBP19.04■□□□□ 0.64
CLCN2-202ENST00000344937 BRPF1P55201 1214 aaPredicted RBP19.04■□□□□ 0.64
CLCN2-202ENST00000344937 MTERF4Q7Z6M4 381 aaKnown RBP19.04■□□□□ 0.64
CLCN2-202ENST00000344937 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
CLCN2-202ENST00000344937 NPHP3Q7Z494 1330 aa19.04■□□□□ 0.64
CLCN2-202ENST00000344937 ERC2O15083 957 aa19.03■□□□□ 0.64
CLCN2-202ENST00000344937 BRINP3Q76B58 766 aa19.03■□□□□ 0.64
CLCN2-202ENST00000344937 LGR6Q9HBX8 967 aa19.03■□□□□ 0.64
CLCN2-202ENST00000344937 PALD1Q9ULE6 856 aa19.03■□□□□ 0.64
CLCN2-202ENST00000344937 KIF1AQ12756 1690 aa19.03■□□□□ 0.64
CLCN2-202ENST00000344937 TMX3Q96JJ7 454 aa19.03■□□□□ 0.64
CLCN2-202ENST00000344937 SLIT3O75094 1523 aa19.03■□□□□ 0.64
CLCN2-202ENST00000344937 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.64
CLCN2-202ENST00000344937 MAP3K5Q99683 1374 aa19.02■□□□□ 0.64
CLCN2-202ENST00000344937 DCCP43146 1447 aa19.02■□□□□ 0.64
CLCN2-202ENST00000344937 RGPD5Q99666 1765 aa19.02■□□□□ 0.63
CLCN2-202ENST00000344937 DYNC1I1O14576 645 aa19.01■□□□□ 0.63
CLCN2-202ENST00000344937 IL1RAPL2Q9NP60 686 aa19.01■□□□□ 0.63
CLCN2-202ENST00000344937 ZNF830Q96NB3 372 aaPredicted RBP19.01■□□□□ 0.63
CLCN2-202ENST00000344937 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.01■□□□□ 0.63
CLCN2-202ENST00000344937 DNTTIP2Q5QJE6 756 aaKnown RBP19.01■□□□□ 0.63
CLCN2-202ENST00000344937 RPAP2Q8IXW5 612 aaPredicted RBP19.01■□□□□ 0.63
CLCN2-202ENST00000344937 ZNF445P59923 1031 aa19■□□□□ 0.63
CLCN2-202ENST00000344937 MPRIPQ6WCQ1 1025 aa19■□□□□ 0.63
CLCN2-202ENST00000344937 ZNF500O60304 480 aaPredicted RBP19■□□□□ 0.63
CLCN2-202ENST00000344937 PDE1AP54750 535 aa19■□□□□ 0.63
CLCN2-202ENST00000344937 ZNF530Q6P9A1 599 aaPredicted RBP19■□□□□ 0.63
CLCN2-202ENST00000344937 SLAIN2Q9P270 581 aa19■□□□□ 0.63
CLCN2-202ENST00000344937 ALS2Q96Q42 1657 aa18.99■□□□□ 0.63
CLCN2-202ENST00000344937 NOL7Q9UMY1 257 aaKnown RBP18.99■□□□□ 0.63
CLCN2-202ENST00000344937 CYP2E1P05181 493 aaPredicted RBP18.99■□□□□ 0.63
CLCN2-202ENST00000344937 JARID2Q92833 1246 aaPredicted RBP18.99■□□□□ 0.63
CLCN2-202ENST00000344937 CCDC94Q9BW85 323 aaPredicted RBP18.99■□□□□ 0.63
CLCN2-202ENST00000344937 NLRP2Q9NX02 1062 aa18.99■□□□□ 0.63
CLCN2-202ENST00000344937 FKBP5Q13451 457 aaPredicted RBP18.98■□□□□ 0.63
CLCN2-202ENST00000344937 CWC22Q9HCG8 908 aaKnown RBP18.98■□□□□ 0.63
CLCN2-202ENST00000344937 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
CLCN2-202ENST00000344937 ERBB3P21860 1342 aa18.97■□□□□ 0.63
CLCN2-202ENST00000344937 SPATA31A3Q5VYP0 1347 aa18.97■□□□□ 0.63
CLCN2-202ENST00000344937 GADD45BO75293 160 aaPredicted RBP18.97■□□□□ 0.63
CLCN2-202ENST00000344937 HMMRO75330 724 aa18.97■□□□□ 0.63
CLCN2-202ENST00000344937 TAF7Q15545 349 aaPredicted RBP18.97■□□□□ 0.63
CLCN2-202ENST00000344937 KIAA0232Q92628 1395 aa18.97■□□□□ 0.63
CLCN2-202ENST00000344937 UNC5CLQ8IV45 518 aa18.96■□□□□ 0.63
CLCN2-202ENST00000344937 TSC1Q92574 1164 aa18.96■□□□□ 0.63
CLCN2-202ENST00000344937 TNS3Q68CZ2 1445 aa18.96■□□□□ 0.63
CLCN2-202ENST00000344937 PNMA6EA0A0J9YXQ4 647 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 KCNQ3O43525 872 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 CSB-PGBD3P0DP91 1061 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 NUTM1Q86Y26 1132 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 PLEKHO1Q53GL0 409 aaPredicted RBP18.95■□□□□ 0.62
CLCN2-202ENST00000344937 PPP4R3BQ5MIZ7 849 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 C17orf53Q8N3J3 647 aaPredicted RBP18.95■□□□□ 0.62
CLCN2-202ENST00000344937 DDX54Q8TDD1 881 aaKnown RBP18.95■□□□□ 0.62
CLCN2-202ENST00000344937 PXDNQ92626 1479 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 HS1BP3Q53T59 392 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 LRSAM1Q6UWE0 723 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 CLEC17AQ6ZS10 378 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 ATP10DQ9P241 1426 aa18.95■□□□□ 0.62
CLCN2-202ENST00000344937 PHRF1Q9P1Y6 1649 aaKnown RBP18.94■□□□□ 0.62
CLCN2-202ENST00000344937 FAM177BA6PVY3 158 aa18.94■□□□□ 0.62
CLCN2-202ENST00000344937 PDIA4P13667 645 aaKnown RBP18.94■□□□□ 0.62
CLCN2-202ENST00000344937 NAP1L2Q9ULW6 460 aaPredicted RBP18.93■□□□□ 0.62
CLCN2-202ENST00000344937 IL25Q9H293 177 aa18.92■□□□□ 0.62
CLCN2-202ENST00000344937 MX1P20591 662 aa18.92■□□□□ 0.62
CLCN2-202ENST00000344937 C1orf141Q5JVX7 400 aa18.92■□□□□ 0.62
CLCN2-202ENST00000344937 ESYT1Q9BSJ8 1104 aa18.92■□□□□ 0.62
CLCN2-202ENST00000344937 CHMP3Q9Y3E7 222 aa18.92■□□□□ 0.62
CLCN2-202ENST00000344937 GNAI2P04899 355 aa18.91■□□□□ 0.62
CLCN2-202ENST00000344937 CPA1P15085 419 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms