RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ANKRD24Q8TF21 1146 aa17.51■□□□□ 0.39
UBE3B-202ENST00000342494 UBA5Q9GZZ9 404 aa17.51■□□□□ 0.39
UBE3B-202ENST00000342494 ST5P78524 1137 aa17.51■□□□□ 0.39
UBE3B-202ENST00000342494 CCDC83Q8IWF9 413 aa17.51■□□□□ 0.39
UBE3B-202ENST00000342494 CWC25Q9NXE8 425 aaPredicted RBP17.51■□□□□ 0.39
UBE3B-202ENST00000342494 MSH6P52701 1360 aa17.51■□□□□ 0.39
UBE3B-202ENST00000342494 CABP5Q9NP86 173 aa17.5■□□□□ 0.39
UBE3B-202ENST00000342494 TMEM266Q2M3C6 531 aa17.5■□□□□ 0.39
UBE3B-202ENST00000342494 MAP7D2Q96T17 732 aa17.5■□□□□ 0.39
UBE3B-202ENST00000342494 NAIPQ13075 1403 aa17.5■□□□□ 0.39
UBE3B-202ENST00000342494 FERMT3Q86UX7 667 aa17.5■□□□□ 0.39
UBE3B-202ENST00000342494 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
UBE3B-202ENST00000342494 HMGB1P09429 215 aaKnown RBP17.5■□□□□ 0.39
UBE3B-202ENST00000342494 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
UBE3B-202ENST00000342494 BAG3O95817 575 aa17.5■□□□□ 0.39
UBE3B-202ENST00000342494 CAMSAP2Q08AD1 1489 aa17.5■□□□□ 0.39
UBE3B-202ENST00000342494 MAP3K2Q9Y2U5 619 aa17.49■□□□□ 0.39
UBE3B-202ENST00000342494 CCDC194A0A1B0GVG4 234 aa17.49■□□□□ 0.39
UBE3B-202ENST00000342494 NBPF6Q5VWK0 638 aa17.49■□□□□ 0.39
UBE3B-202ENST00000342494 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
UBE3B-202ENST00000342494 NBPF4Q96M43 638 aa17.49■□□□□ 0.39
UBE3B-202ENST00000342494 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
UBE3B-202ENST00000342494 FLIIQ13045 1269 aa17.49■□□□□ 0.39
UBE3B-202ENST00000342494 C8orf76Q96K31 380 aa17.49■□□□□ 0.39
UBE3B-202ENST00000342494 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
UBE3B-202ENST00000342494 CATIPQ7Z7H3 387 aa17.49■□□□□ 0.39
UBE3B-202ENST00000342494 TAF4BQ92750 862 aa17.49■□□□□ 0.39
UBE3B-202ENST00000342494 MYO1BO43795 1136 aa17.48■□□□□ 0.39
UBE3B-202ENST00000342494 ZNF397Q8NF99 534 aaPredicted RBP17.48■□□□□ 0.39
UBE3B-202ENST00000342494 TSG101Q99816 390 aa17.48■□□□□ 0.39
UBE3B-202ENST00000342494 HLA-DOAP06340 250 aa17.48■□□□□ 0.39
UBE3B-202ENST00000342494 CETN2P41208 172 aa17.48■□□□□ 0.39
UBE3B-202ENST00000342494 TTF1Q15361 905 aaPredicted RBP17.48■□□□□ 0.39
UBE3B-202ENST00000342494 EPB41L2O43491 1005 aaKnown RBP17.48■□□□□ 0.39
UBE3B-202ENST00000342494 NLRP5P59047 1200 aa17.48■□□□□ 0.39
UBE3B-202ENST00000342494 KIAA1328Q86T90 577 aa17.48■□□□□ 0.39
UBE3B-202ENST00000342494 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
UBE3B-202ENST00000342494 GOLGA8BA8MQT2 603 aa17.47■□□□□ 0.39
UBE3B-202ENST00000342494 JAKMIP3Q5VZ66 844 aa17.47■□□□□ 0.39
UBE3B-202ENST00000342494 SPTY2D1Q68D10 685 aaPredicted RBP17.47■□□□□ 0.39
UBE3B-202ENST00000342494 ENOX2Q16206 610 aaKnown RBP17.47■□□□□ 0.39
UBE3B-202ENST00000342494 TSPYL1Q9H0U9 437 aa17.47■□□□□ 0.39
UBE3B-202ENST00000342494 FAM135AQ9P2D6 1515 aa17.47■□□□□ 0.39
UBE3B-202ENST00000342494 KIF14Q15058 1648 aa17.47■□□□□ 0.39
UBE3B-202ENST00000342494 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
UBE3B-202ENST00000342494 FILIP1Q7Z7B0 1213 aa17.47■□□□□ 0.39
UBE3B-202ENST00000342494 MPNDQ8N594 471 aa17.47■□□□□ 0.39
UBE3B-202ENST00000342494 ACEP12821 1306 aa17.47■□□□□ 0.39
UBE3B-202ENST00000342494 SPDYE4A6NLX3 237 aa17.46■□□□□ 0.39
UBE3B-202ENST00000342494 CFAP100Q494V2 611 aa17.46■□□□□ 0.39
UBE3B-202ENST00000342494 RARSP54136 660 aaKnown RBP17.46■□□□□ 0.39
UBE3B-202ENST00000342494 IQCEQ6IPM2 695 aa17.46■□□□□ 0.39
UBE3B-202ENST00000342494 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
UBE3B-202ENST00000342494 BACH2Q9BYV9 841 aa17.46■□□□□ 0.39
UBE3B-202ENST00000342494 SSRP1Q08945 709 aaKnown RBP17.46■□□□□ 0.39
UBE3B-202ENST00000342494 HMGN5P82970 282 aaKnown RBP17.46■□□□□ 0.39
UBE3B-202ENST00000342494 CIZ1Q9ULV3 898 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-202ENST00000342494 CCDC97Q96F63 343 aaPredicted RBP17.46■□□□□ 0.38
UBE3B-202ENST00000342494 PDE4BQ07343 736 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 TAX1BP1Q86VP1 789 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 CENPHQ9H3R5 247 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 MAP3K11Q16584 847 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 PTPRCP08575 1304 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 NOS1P29475 1434 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 GOLIM4O00461 696 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 BAG4O95429 457 aaKnown RBP17.45■□□□□ 0.38
UBE3B-202ENST00000342494 FKBP15Q5T1M5 1219 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 TNRQ92752 1358 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
UBE3B-202ENST00000342494 TSPY2A6NKD2 308 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 LIG1P18858 919 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 CCDC184Q52MB2 194 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 KLHL10Q6JEL2 608 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 CCDC150Q8NCX0 1101 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 CCDC12Q8WUD4 166 aaPredicted RBP17.44■□□□□ 0.38
UBE3B-202ENST00000342494 SH2B1Q9NRF2 756 aaPredicted RBP17.44■□□□□ 0.38
UBE3B-202ENST00000342494 CWC15Q9P013 229 aaKnown RBP17.44■□□□□ 0.38
UBE3B-202ENST00000342494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.44■□□□□ 0.38
UBE3B-202ENST00000342494 GUCY1B3Q02153 619 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 CCDC152Q4G0S7 254 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 ARHGAP29Q52LW3 1261 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 ERLIN1O75477 346 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 KIF20AO95235 890 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 KIF5BP33176 963 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 CCDC112Q8NEF3 446 aa17.44■□□□□ 0.38
UBE3B-202ENST00000342494 EZRP15311 586 aaKnown RBP17.43■□□□□ 0.38
UBE3B-202ENST00000342494 ACSBG1Q96GR2 724 aa17.43■□□□□ 0.38
UBE3B-202ENST00000342494 C8orf37Q96NL8 207 aa17.43■□□□□ 0.38
UBE3B-202ENST00000342494 VAT1LQ9HCJ6 419 aa17.43■□□□□ 0.38
UBE3B-202ENST00000342494 NPHP3Q7Z494 1330 aa17.43■□□□□ 0.38
UBE3B-202ENST00000342494 ZCRB1Q8TBF4 217 aaKnown RBP17.43■□□□□ 0.38
UBE3B-202ENST00000342494 FANCAO15360 1455 aa17.43■□□□□ 0.38
UBE3B-202ENST00000342494 GBP2P32456 591 aaPredicted RBP17.43■□□□□ 0.38
UBE3B-202ENST00000342494 CAMK4Q16566 473 aa17.43■□□□□ 0.38
UBE3B-202ENST00000342494 CACNA2D4Q7Z3S7 1137 aa17.43■□□□□ 0.38
UBE3B-202ENST00000342494 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
UBE3B-202ENST00000342494 ECHDC1Q9NTX5 307 aa17.43■□□□□ 0.38
UBE3B-202ENST00000342494 TRMT1LQ7Z2T5 733 aaKnown RBP17.42■□□□□ 0.38
UBE3B-202ENST00000342494 EVI5LQ96CN4 794 aa17.42■□□□□ 0.38
UBE3B-202ENST00000342494 KAT14Q9H8E8 782 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms