RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CTNNA3Q9UI47 895 aa15.39■□□□□ 0.05
VSTM4-202ENST00000332853 ARHGAP45Q92619 1136 aa15.39■□□□□ 0.05
VSTM4-202ENST00000332853 CAMK4Q16566 473 aa15.39■□□□□ 0.05
VSTM4-202ENST00000332853 TNPO1Q92973 898 aaKnown RBP15.39■□□□□ 0.05
VSTM4-202ENST00000332853 KCNA6P17658 529 aa15.38■□□□□ 0.05
VSTM4-202ENST00000332853 SDSP20132 328 aa15.38■□□□□ 0.05
VSTM4-202ENST00000332853 C8orf34Q49A92 452 aa15.38■□□□□ 0.05
VSTM4-202ENST00000332853 TRIM22Q8IYM9 498 aa15.38■□□□□ 0.05
VSTM4-202ENST00000332853 PPP1R1BQ9UD71 204 aaPredicted RBP15.38■□□□□ 0.05
VSTM4-202ENST00000332853 AKAP2Q9Y2D5 859 aa15.38■□□□□ 0.05
VSTM4-202ENST00000332853 CCDC192P0DO97 292 aa15.38■□□□□ 0.05
VSTM4-202ENST00000332853 CEP89Q96ST8 783 aa15.38■□□□□ 0.05
VSTM4-202ENST00000332853 EYA1Q99502 592 aa15.38■□□□□ 0.05
VSTM4-202ENST00000332853 IPO7O95373 1038 aaKnown RBP15.38■□□□□ 0.05
VSTM4-202ENST00000332853 BRPF1P55201 1214 aaPredicted RBP15.38■□□□□ 0.05
VSTM4-202ENST00000332853 TTLL5Q6EMB2 1281 aa15.38■□□□□ 0.05
VSTM4-202ENST00000332853 SNRKQ9NRH2 765 aa15.37■□□□□ 0.05
VSTM4-202ENST00000332853 GUCY1B3Q02153 619 aa15.37■□□□□ 0.05
VSTM4-202ENST00000332853 GOLIM4O00461 696 aa15.37■□□□□ 0.05
VSTM4-202ENST00000332853 UBAC1Q9BSL1 405 aa15.37■□□□□ 0.05
VSTM4-202ENST00000332853 ECHDC1Q9NTX5 307 aa15.37■□□□□ 0.05
VSTM4-202ENST00000332853 EXOC5O00471 708 aa15.36■□□□□ 0.05
VSTM4-202ENST00000332853 PPFIA3O75145 1194 aa15.36■□□□□ 0.05
VSTM4-202ENST00000332853 XAGE3Q8WTP9 111 aa15.36■□□□□ 0.05
VSTM4-202ENST00000332853 SAMD9LQ8IVG5 1584 aa15.36■□□□□ 0.05
VSTM4-202ENST00000332853 SNRPA1P09661 255 aaKnown RBP15.36■□□□□ 0.05
VSTM4-202ENST00000332853 RBM5P52756 815 aaKnown RBP eCLIP15.36■□□□□ 0.05
VSTM4-202ENST00000332853 RHPN1Q8TCX5 695 aa15.36■□□□□ 0.05
VSTM4-202ENST00000332853 GDPD2Q9HCC8 539 aa15.36■□□□□ 0.05
VSTM4-202ENST00000332853 FLT4P35916 1363 aa15.36■□□□□ 0.05
VSTM4-202ENST00000332853 MINDY4BA8MYZ0 360 aa15.36■□□□□ 0.05
VSTM4-202ENST00000332853 CCDC43Q96MW1 224 aaKnown RBP15.36■□□□□ 0.05
VSTM4-202ENST00000332853 PUS7Q96PZ0 661 aaKnown RBP15.36■□□□□ 0.05
VSTM4-202ENST00000332853 CADPS2Q86UW7 1296 aa15.35■□□□□ 0.05
VSTM4-202ENST00000332853 ANKRD13DQ6ZTN6 518 aa15.35■□□□□ 0.05
VSTM4-202ENST00000332853 COPS6Q7L5N1 327 aa15.35■□□□□ 0.05
VSTM4-202ENST00000332853 CWC25Q9NXE8 425 aaPredicted RBP15.35■□□□□ 0.05
VSTM4-202ENST00000332853 EVI5LQ96CN4 794 aa15.35■□□□□ 0.05
VSTM4-202ENST00000332853 MAP3K19Q56UN5 1328 aa15.35■□□□□ 0.05
VSTM4-202ENST00000332853 ANKRD44Q8N8A2 993 aa15.35■□□□□ 0.05
VSTM4-202ENST00000332853 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
VSTM4-202ENST00000332853 ZFYVE9O95405 1425 aa15.34■□□□□ 0.05
VSTM4-202ENST00000332853 AKAP4Q5JQC9 854 aa15.34■□□□□ 0.05
VSTM4-202ENST00000332853 ARHGEF5Q12774 1597 aa15.34■□□□□ 0.05
VSTM4-202ENST00000332853 HOXC9P31274 260 aa15.34■□□□□ 0.05
VSTM4-202ENST00000332853 NAP1L1P55209 391 aaKnown RBP15.34■□□□□ 0.05
VSTM4-202ENST00000332853 ZMYM4Q5VZL5 1548 aa15.34■□□□□ 0.05
VSTM4-202ENST00000332853 ABCA8O94911 1581 aa15.34■□□□□ 0.05
VSTM4-202ENST00000332853 CCT2P78371 535 aaKnown RBP15.34■□□□□ 0.05
VSTM4-202ENST00000332853 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
VSTM4-202ENST00000332853 PA2G4Q9UQ80 394 aaKnown RBP15.34■□□□□ 0.05
VSTM4-202ENST00000332853 ZPR1O75312 459 aa15.34■□□□□ 0.05
VSTM4-202ENST00000332853 ANKRD18BA2A2Z9 1011 aa15.33■□□□□ 0.05
VSTM4-202ENST00000332853 SEC24BO95487 1268 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 CCDC82Q8N4S0 544 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 PDE1AP54750 535 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 NFATC2IPQ8NCF5 419 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 ZNF652Q9Y2D9 606 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 ATP10AO60312 1499 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 JMYQ8N9B5 988 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 CFAP45Q9UL16 551 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 MBD5Q9P267 1494 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 CDK5RAP3Q96JB5 506 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 MSH6P52701 1360 aa15.33■□□□□ 0.04
VSTM4-202ENST00000332853 LIMCH1Q9UPQ0 1083 aa15.32■□□□□ 0.04
VSTM4-202ENST00000332853 ZCRB1Q8TBF4 217 aaKnown RBP15.32■□□□□ 0.04
VSTM4-202ENST00000332853 TTC37Q6PGP7 1564 aa15.32■□□□□ 0.04
VSTM4-202ENST00000332853 SERPINC1P01008 464 aa15.32■□□□□ 0.04
VSTM4-202ENST00000332853 IL13P35225 146 aa15.32■□□□□ 0.04
VSTM4-202ENST00000332853 HSPA2P54652 639 aa15.32■□□□□ 0.04
VSTM4-202ENST00000332853 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
VSTM4-202ENST00000332853 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
VSTM4-202ENST00000332853 CDKL5O76039 1030 aa15.32■□□□□ 0.04
VSTM4-202ENST00000332853 ZBTB40Q9NUA8 1239 aa15.32■□□□□ 0.04
VSTM4-202ENST00000332853 CWF19L2Q2TBE0 894 aaKnown RBP15.32■□□□□ 0.04
VSTM4-202ENST00000332853 TXLNAP40222 546 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 HAND2P61296 217 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 CEP85Q6P2H3 762 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 RAB11FIP4Q86YS3 637 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 ACSBG1Q96GR2 724 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 G2E3Q7L622 706 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 NGLY1Q96IV0 654 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 DDX46Q7L014 1031 aaKnown RBP15.31■□□□□ 0.04
VSTM4-202ENST00000332853 LDHAL6AQ6ZMR3 332 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 NAPBQ9H115 298 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 MAP3K5Q99683 1374 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 KDM5AP29375 1690 aaKnown RBP15.31■□□□□ 0.04
VSTM4-202ENST00000332853 GJB2P29033 226 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 ATP8B2P98198 1209 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 MNS1Q8NEH6 495 aa15.31■□□□□ 0.04
VSTM4-202ENST00000332853 GCP02774 474 aa15.3■□□□□ 0.04
VSTM4-202ENST00000332853 CAVIN4Q5BKX8 364 aa15.3■□□□□ 0.04
VSTM4-202ENST00000332853 ANKIB1Q9P2G1 1089 aa15.3■□□□□ 0.04
VSTM4-202ENST00000332853 EPS15P42566 896 aa15.3■□□□□ 0.04
VSTM4-202ENST00000332853 UGGT1Q9NYU2 1555 aa15.3■□□□□ 0.04
VSTM4-202ENST00000332853 SPATA31E1Q6ZUB1 1445 aa15.3■□□□□ 0.04
VSTM4-202ENST00000332853 ZNF213O14771 459 aa15.3■□□□□ 0.04
VSTM4-202ENST00000332853 SLC5A1P13866 664 aa15.3■□□□□ 0.04
VSTM4-202ENST00000332853 HSP90AB3PQ58FF7 597 aa15.3■□□□□ 0.04
VSTM4-202ENST00000332853 PTPRTO14522 1441 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms