RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 KSR2Q6VAB6 950 aa22.79■■□□□ 1.24
CCDC43-201ENST00000315286 ZCRB1Q8TBF4 217 aaKnown RBP22.79■■□□□ 1.24
CCDC43-201ENST00000315286 STRN4Q9NRL3 753 aa22.79■■□□□ 1.24
CCDC43-201ENST00000315286 MAP3K2Q9Y2U5 619 aa22.79■■□□□ 1.24
CCDC43-201ENST00000315286 PARP4Q9UKK3 1724 aaKnown RBP22.79■■□□□ 1.24
CCDC43-201ENST00000315286 NBPF7P0C2Y1 421 aaPredicted RBP22.78■■□□□ 1.24
CCDC43-201ENST00000315286 CARD10Q9BWT7 1032 aa22.78■■□□□ 1.24
CCDC43-201ENST00000315286 CABP4P57796 275 aa22.78■■□□□ 1.24
CCDC43-201ENST00000315286 LARP1Q6PKG0 1096 aaKnown RBP22.77■■□□□ 1.24
CCDC43-201ENST00000315286 TBC1D9Q6ZT07 1266 aa22.77■■□□□ 1.24
CCDC43-201ENST00000315286 EVA1CP58658 441 aa22.77■■□□□ 1.23
CCDC43-201ENST00000315286 NBR1Q14596 966 aa22.77■■□□□ 1.23
CCDC43-201ENST00000315286 TTC5Q8N0Z6 440 aa22.77■■□□□ 1.23
CCDC43-201ENST00000315286 PCDH11XQ9BZA7 1347 aa22.76■■□□□ 1.23
CCDC43-201ENST00000315286 PCDH11YQ9BZA8 1340 aa22.76■■□□□ 1.23
CCDC43-201ENST00000315286 IL2RBP14784 551 aa22.75■■□□□ 1.23
CCDC43-201ENST00000315286 AIMP1Q12904 312 aaKnown RBP22.75■■□□□ 1.23
CCDC43-201ENST00000315286 SSH3Q8TE77 659 aa22.75■■□□□ 1.23
CCDC43-201ENST00000315286 CDC45O75419 566 aa22.74■■□□□ 1.23
CCDC43-201ENST00000315286 SNRPA1P09661 255 aaKnown RBP22.74■■□□□ 1.23
CCDC43-201ENST00000315286 BECN1Q14457 450 aa22.74■■□□□ 1.23
CCDC43-201ENST00000315286 PPP1R42Q7Z4L9 355 aa22.74■■□□□ 1.23
CCDC43-201ENST00000315286 LRRCC1Q9C099 1032 aa22.74■■□□□ 1.23
CCDC43-201ENST00000315286 USP16Q9Y5T5 823 aa22.74■■□□□ 1.23
CCDC43-201ENST00000315286 IBTKQ9P2D0 1353 aaPredicted RBP22.74■■□□□ 1.23
CCDC43-201ENST00000315286 FMNL2Q96PY5 1086 aa22.73■■□□□ 1.23
CCDC43-201ENST00000315286 ALDH1L1O75891 902 aa22.73■■□□□ 1.23
CCDC43-201ENST00000315286 MYL6BP14649 208 aa22.73■■□□□ 1.23
CCDC43-201ENST00000315286 DDX58O95786 925 aaKnown RBP22.72■■□□□ 1.23
CCDC43-201ENST00000315286 POLA2Q14181 598 aa22.72■■□□□ 1.23
CCDC43-201ENST00000315286 CWF19L2Q2TBE0 894 aaKnown RBP22.72■■□□□ 1.23
CCDC43-201ENST00000315286 OSBPL3Q9H4L5 887 aa22.71■■□□□ 1.23
CCDC43-201ENST00000315286 SDSP20132 328 aa22.7■■□□□ 1.23
CCDC43-201ENST00000315286 RBM25P49756 843 aaKnown RBP22.7■■□□□ 1.23
CCDC43-201ENST00000315286 PDE1AP54750 535 aa22.7■■□□□ 1.23
CCDC43-201ENST00000315286 DDX54Q8TDD1 881 aaKnown RBP22.7■■□□□ 1.23
CCDC43-201ENST00000315286 SRGAP3O43295 1099 aa22.7■■□□□ 1.22
CCDC43-201ENST00000315286 NKX1-1Q15270 411 aaPredicted RBP22.7■■□□□ 1.22
CCDC43-201ENST00000315286 LINS1Q8NG48 757 aa22.7■■□□□ 1.22
CCDC43-201ENST00000315286 C9orf78Q9NZ63 289 aaPredicted RBP22.7■■□□□ 1.22
CCDC43-201ENST00000315286 XAGE3Q8WTP9 111 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 TBC1D2Q9BYX2 928 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 SHANK3Q9BYB0 1731 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 ROBO1Q9Y6N7 1651 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 SALL3Q9BXA9 1300 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 ERVV-2B6SEH9 535 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 COPS6Q7L5N1 327 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 RIC3Q7Z5B4 369 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 BTG4Q9NY30 223 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 USP35Q9P2H5 1018 aa22.69■■□□□ 1.22
CCDC43-201ENST00000315286 SURF6O75683 361 aaKnown RBP22.68■■□□□ 1.22
CCDC43-201ENST00000315286 LRP10Q7Z4F1 713 aa22.68■■□□□ 1.22
CCDC43-201ENST00000315286 PIP4K2AP48426 406 aaPredicted RBP22.67■■□□□ 1.22
CCDC43-201ENST00000315286 GLI3P10071 1580 aa22.66■■□□□ 1.22
CCDC43-201ENST00000315286 RAB11FIP3O75154 756 aa22.66■■□□□ 1.22
CCDC43-201ENST00000315286 TSHZ3Q63HK5 1081 aa22.66■■□□□ 1.22
CCDC43-201ENST00000315286 IGKV5-2P06315 115 aa22.65■■□□□ 1.22
CCDC43-201ENST00000315286 GRM8O00222 908 aa22.64■■□□□ 1.22
CCDC43-201ENST00000315286 MX1P20591 662 aa22.64■■□□□ 1.22
CCDC43-201ENST00000315286 MTX1Q13505 466 aa22.64■■□□□ 1.22
CCDC43-201ENST00000315286 IL1RAPL2Q9NP60 686 aa22.64■■□□□ 1.22
CCDC43-201ENST00000315286 UTYO14607 1347 aa22.63■■□□□ 1.21
CCDC43-201ENST00000315286 ANKRD13DQ6ZTN6 518 aa22.63■■□□□ 1.21
CCDC43-201ENST00000315286 AHDC1Q5TGY3 1603 aaPredicted RBP22.63■■□□□ 1.21
CCDC43-201ENST00000315286 RHPN1Q8TCX5 695 aa22.62■■□□□ 1.21
CCDC43-201ENST00000315286 METTL22Q9BUU2 404 aaPredicted RBP22.62■■□□□ 1.21
CCDC43-201ENST00000315286 HDAC5Q9UQL6 1122 aa22.62■■□□□ 1.21
CCDC43-201ENST00000315286 LAMB4A4D0S4 1761 aa22.62■■□□□ 1.21
CCDC43-201ENST00000315286 NEXNQ0ZGT2 675 aa22.62■■□□□ 1.21
CCDC43-201ENST00000315286 STAP2Q9UGK3 403 aa22.62■■□□□ 1.21
CCDC43-201ENST00000315286 LTBP4Q8N2S1 1624 aa22.62■■□□□ 1.21
CCDC43-201ENST00000315286 UBR2Q8IWV8 1755 aa22.62■■□□□ 1.21
CCDC43-201ENST00000315286 NEURL1BA8MQ27 555 aa22.61■■□□□ 1.21
CCDC43-201ENST00000315286 KAZALD1Q96I82 304 aa22.61■■□□□ 1.21
CCDC43-201ENST00000315286 SUCLG2Q96I99 432 aa22.61■■□□□ 1.21
CCDC43-201ENST00000315286 KIF2CQ99661 725 aa22.61■■□□□ 1.21
CCDC43-201ENST00000315286 MYD88Q99836 296 aa22.61■■□□□ 1.21
CCDC43-201ENST00000315286 COL14A1Q05707 1796 aaKnown RBP22.6■■□□□ 1.21
CCDC43-201ENST00000315286 TUBGCP6Q96RT7 1819 aa22.6■■□□□ 1.21
CCDC43-201ENST00000315286 KIF1BPQ96EK5 621 aa22.6■■□□□ 1.21
CCDC43-201ENST00000315286 KCPQ6ZWJ8 1503 aa22.59■■□□□ 1.21
CCDC43-201ENST00000315286 EIF5BO60841 1220 aaKnown RBP22.59■■□□□ 1.21
CCDC43-201ENST00000315286 CASC1Q6TDU7 716 aa22.59■■□□□ 1.21
CCDC43-201ENST00000315286 NBPF26B4DH59 902 aa22.59■■□□□ 1.21
CCDC43-201ENST00000315286 PTCD1O75127 700 aaKnown RBP22.59■■□□□ 1.21
CCDC43-201ENST00000315286 MYT1Q01538 1121 aa22.59■■□□□ 1.21
CCDC43-201ENST00000315286 GCKRQ14397 625 aa22.59■■□□□ 1.21
CCDC43-201ENST00000315286 NBPF14Q5TI25 921 aa22.59■■□□□ 1.21
CCDC43-201ENST00000315286 NBPF10Q6P3W6 841 aaKnown RBP22.59■■□□□ 1.21
CCDC43-201ENST00000315286 NUTM1Q86Y26 1132 aa22.59■■□□□ 1.21
CCDC43-201ENST00000315286 NBPF15Q8N660 670 aa22.59■■□□□ 1.21
CCDC43-201ENST00000315286 PAPPAQ13219 1627 aa22.59■■□□□ 1.21
CCDC43-201ENST00000315286 COL22A1Q8NFW1 1626 aaPredicted RBP22.59■■□□□ 1.21
CCDC43-201ENST00000315286 HSP90AB4PQ58FF6 505 aa22.58■■□□□ 1.21
CCDC43-201ENST00000315286 TOGARAM1Q9Y4F4 1720 aa22.58■■□□□ 1.21
CCDC43-201ENST00000315286 SLKQ9H2G2 1235 aaPredicted RBP22.58■■□□□ 1.2
CCDC43-201ENST00000315286 BICC1Q9H694 974 aaKnown RBP22.58■■□□□ 1.2
CCDC43-201ENST00000315286 COL16A1Q07092 1604 aaPredicted RBP22.57■■□□□ 1.2
CCDC43-201ENST00000315286 ERBB4Q15303 1308 aa22.56■■□□□ 1.2
CCDC43-201ENST00000315286 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms