RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 BANK1Q8NDB2 785 aa11.65□□□□□ -0.54
RBFOX1-201ENST00000311745 IL17REQ8NFR9 667 aa11.65□□□□□ -0.54
RBFOX1-201ENST00000311745 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
RBFOX1-201ENST00000311745 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.54
RBFOX1-201ENST00000311745 C5P01031 1676 aa11.65□□□□□ -0.55
RBFOX1-201ENST00000311745 NLRP6P59044 892 aa11.64□□□□□ -0.55
RBFOX1-201ENST00000311745 LMTK3Q96Q04 1460 aa11.64□□□□□ -0.55
RBFOX1-201ENST00000311745 GLI3P10071 1580 aa11.64□□□□□ -0.55
RBFOX1-201ENST00000311745 TERF1P54274 439 aa11.64□□□□□ -0.55
RBFOX1-201ENST00000311745 PHF8Q9UPP1 1060 aa11.64□□□□□ -0.55
RBFOX1-201ENST00000311745 AXDND1Q5T1B0 1012 aaPredicted RBP11.64□□□□□ -0.55
RBFOX1-201ENST00000311745 ANKLE2Q86XL3 938 aa11.64□□□□□ -0.55
RBFOX1-201ENST00000311745 SCN11AQ9UI33 1791 aa11.63□□□□□ -0.55
RBFOX1-201ENST00000311745 KIF2CQ99661 725 aa11.63□□□□□ -0.55
RBFOX1-201ENST00000311745 PLCD4Q9BRC7 762 aa11.63□□□□□ -0.55
RBFOX1-201ENST00000311745 TNNT1P13805 278 aa11.63□□□□□ -0.55
RBFOX1-201ENST00000311745 TMX1Q9H3N1 280 aa11.63□□□□□ -0.55
RBFOX1-201ENST00000311745 NCOA3Q9Y6Q9 1424 aa11.63□□□□□ -0.55
RBFOX1-201ENST00000311745 MCM4P33991 863 aa11.62□□□□□ -0.55
RBFOX1-201ENST00000311745 MAP3K5Q99683 1374 aa11.62□□□□□ -0.55
RBFOX1-201ENST00000311745 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
RBFOX1-201ENST00000311745 GSPT1P15170 499 aaKnown RBP11.62□□□□□ -0.55
RBFOX1-201ENST00000311745 HTATSF1O43719 755 aaKnown RBP11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 NBPF6Q5VWK0 638 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 ABTB2Q8N961 1025 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 NBPF4Q96M43 638 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 C1orf167Q5SNV9 1468 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 PTPRCP08575 1304 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 CEP85Q6P2H3 762 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 TICAM2Q86XR7 235 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 USHBP1Q8N6Y0 703 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 IP6K1Q92551 441 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 TBC1D2Q9BYX2 928 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 API5Q9BZZ5 524 aaKnown RBP11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 PXDNLA1KZ92 1463 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 ERICH4A6NGS2 130 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 TIGD1Q96MW7 591 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 ORAI2Q96SN7 254 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 STRCQ7RTU9 1775 aa11.61□□□□□ -0.55
RBFOX1-201ENST00000311745 PKD1L3Q7Z443 1732 aa11.6□□□□□ -0.55
RBFOX1-201ENST00000311745 ADRA2BP18089 450 aa11.6□□□□□ -0.55
RBFOX1-201ENST00000311745 AMPHP49418 695 aa11.6□□□□□ -0.55
RBFOX1-201ENST00000311745 PLCB2Q00722 1185 aa11.6□□□□□ -0.55
RBFOX1-201ENST00000311745 MEIS3Q99687 375 aa11.6□□□□□ -0.55
RBFOX1-201ENST00000311745 ANKRD44Q8N8A2 993 aa11.6□□□□□ -0.55
RBFOX1-201ENST00000311745 DDIT3P35638 169 aa11.59□□□□□ -0.55
RBFOX1-201ENST00000311745 BMP2KLQ5H9B9 411 aa11.59□□□□□ -0.55
RBFOX1-201ENST00000311745 GPATCH11Q8N954 259 aa11.59□□□□□ -0.55
RBFOX1-201ENST00000311745 ABCA3Q99758 1704 aa11.59□□□□□ -0.55
RBFOX1-201ENST00000311745 RBM25P49756 843 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-201ENST00000311745 SASS6Q6UVJ0 657 aa11.59□□□□□ -0.55
RBFOX1-201ENST00000311745 PLEKHM2Q8IWE5 1019 aa11.59□□□□□ -0.55
RBFOX1-201ENST00000311745 OTUD7AQ8TE49 926 aaPredicted RBP11.59□□□□□ -0.55
RBFOX1-201ENST00000311745 SHANK3Q9BYB0 1731 aa11.58□□□□□ -0.55
RBFOX1-201ENST00000311745 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 GRIPAP1Q4V328 841 aa11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 GAS2L3Q86XJ1 694 aa11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 C16orf71Q8IYS4 520 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 GAS2L2Q8NHY3 880 aa11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 GNAT3A8MTJ3 354 aa11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 SLC4A2P04920 1241 aa11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 ABCC6O95255 1503 aa11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 HEG1Q9ULI3 1381 aa11.58□□□□□ -0.56
RBFOX1-201ENST00000311745 CCDC66A2RUB6 948 aa11.57□□□□□ -0.56
RBFOX1-201ENST00000311745 F6X3S4 739 aa11.57□□□□□ -0.56
RBFOX1-201ENST00000311745 ARHGEF25Q86VW2 580 aa11.57□□□□□ -0.56
RBFOX1-201ENST00000311745 TSPYL4Q9UJ04 414 aa11.57□□□□□ -0.56
RBFOX1-201ENST00000311745 NASPP49321 788 aaPredicted RBP11.57□□□□□ -0.56
RBFOX1-201ENST00000311745 CCDC173Q0VFZ6 552 aa11.57□□□□□ -0.56
RBFOX1-201ENST00000311745 LGR6Q9HBX8 967 aa11.57□□□□□ -0.56
RBFOX1-201ENST00000311745 ANKRD45Q5TZF3 282 aa11.56□□□□□ -0.56
RBFOX1-201ENST00000311745 OVOS2A0A0G2JMS6 1433 aa11.56□□□□□ -0.56
RBFOX1-201ENST00000311745 LRRC59Q96AG4 307 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-201ENST00000311745 TOMM22Q9NS69 142 aa11.56□□□□□ -0.56
RBFOX1-201ENST00000311745 CAPN2P17655 700 aa11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 ESCO1Q5FWF5 840 aa11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 C22orf23Q9BZE7 217 aa11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 KCNQ3O43525 872 aa11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 U2AF2P26368 475 aaKnown RBP eCLIP11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 TBC1D9Q6ZT07 1266 aa11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 BABAM1Q9NWV8 329 aa11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 GEMIN8Q9NWZ8 242 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 PARP4Q9UKK3 1724 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 CD2BP2O95400 341 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-201ENST00000311745 GTF2A1P52655 376 aaPredicted RBP11.54□□□□□ -0.56
RBFOX1-201ENST00000311745 CARD10Q9BWT7 1032 aa11.54□□□□□ -0.56
RBFOX1-201ENST00000311745 MFAP1P55081 439 aaKnown RBP11.54□□□□□ -0.56
RBFOX1-201ENST00000311745 LTV1Q96GA3 475 aaPredicted RBP11.54□□□□□ -0.56
RBFOX1-201ENST00000311745 KIF3AQ9Y496 699 aa11.54□□□□□ -0.56
RBFOX1-201ENST00000311745 MRC1P22897 1456 aa11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 GCP02774 474 aa11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 SLC20A2Q08357 652 aa11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 CSPP1Q1MSJ5 1256 aa11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 PDCL2Q8N4E4 241 aa11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 PAPPAQ13219 1627 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms