RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 TET3O43151 1660 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 KRT85P78386 507 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 IFIT5Q13325 482 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 XAGE3Q8WTP9 111 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 BRPF3Q9ULD4 1205 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 IFIT1P09914 478 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 XBP1P17861 261 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 VPS53Q5VIR6 699 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 C16orf71Q8IYS4 520 aaPredicted RBP13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 KDM2BQ8NHM5 1336 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 METP08581 1390 aa13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 KDM4AO75164 1064 aa13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 IDH1O75874 414 aaKnown RBP13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 EVI5LQ96CN4 794 aa13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 TEX13AQ9BXU3 409 aaPredicted RBP13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 IGHMBP2P38935 993 aaKnown RBP13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 CWC25Q9NXE8 425 aaPredicted RBP13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 KIF1BO60333 1816 aa13.57□□□□□ -0.24
PCDHGC3-201ENST00000308177 PES1O00541 588 aaKnown RBP13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 HSPA2P54652 639 aa13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 TSPY26PQ9H489 355 aa13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 CEBPZQ03701 1054 aaKnown RBP13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 ZNF396Q96N95 335 aaPredicted RBP13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 KINO60870 393 aaKnown RBP13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 CLSTN1O94985 981 aa13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 TRMT112Q9UI30 125 aaKnown RBP13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 SOS1Q07889 1333 aaPredicted RBP13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 GRM8O00222 908 aa13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 NFATC2IPQ8NCF5 419 aa13.56□□□□□ -0.24
PCDHGC3-201ENST00000308177 G2E3Q7L622 706 aa13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 JARID2Q92833 1246 aaPredicted RBP13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 ABCC3O15438 1527 aa13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 EFCAB6Q5THR3 1501 aa13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 LINS1Q8NG48 757 aa13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 GPTP24298 496 aa13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 BICDL1Q6ZP65 573 aa13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 CCDC83Q8IWF9 413 aa13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 BRMS1Q9HCU9 246 aa13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 PDIA4P13667 645 aaKnown RBP13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 STK38Q15208 465 aa13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
PCDHGC3-201ENST00000308177 UNC13BO14795 1591 aa13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 TPM3P06753 285 aa13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 SLC3A2P08195 630 aaKnown RBP13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 GRPEL1Q9HAV7 217 aa13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 ZNF652Q9Y2D9 606 aa13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 RNMTO43148 476 aaKnown RBP13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 ATP2B1P20020 1258 aa13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 TNPO1Q92973 898 aaKnown RBP13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 BABAM1Q9NWV8 329 aa13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 SSFA2P28290 1259 aa13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 IMMTQ16891 758 aaKnown RBP13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
PCDHGC3-201ENST00000308177 CDC42BPBQ9Y5S2 1711 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 SH2B1Q9NRF2 756 aaPredicted RBP13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 SEC24BO95487 1268 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 ARID3AQ99856 593 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 MTMR7Q9Y216 660 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 PLEKHM2Q8IWE5 1019 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 STK11IPQ8N1F8 1099 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 AIDAQ96BJ3 306 aa13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 NAT10Q9H0A0 1025 aaKnown RBP13.53□□□□□ -0.24
PCDHGC3-201ENST00000308177 TDO2P48775 406 aa13.52□□□□□ -0.24
PCDHGC3-201ENST00000308177 CROCC2H7BZ55 1655 aa13.52□□□□□ -0.24
PCDHGC3-201ENST00000308177 DCAF5Q96JK2 942 aa13.52□□□□□ -0.24
PCDHGC3-201ENST00000308177 ANKRD18BA2A2Z9 1011 aa13.52□□□□□ -0.25
PCDHGC3-201ENST00000308177 TPM1P09493 284 aa13.52□□□□□ -0.25
PCDHGC3-201ENST00000308177 TRIM22Q8IYM9 498 aa13.52□□□□□ -0.25
PCDHGC3-201ENST00000308177 RAI14Q9P0K7 980 aa13.52□□□□□ -0.25
PCDHGC3-201ENST00000308177 CCDC47Q96A33 483 aaKnown RBP13.52□□□□□ -0.25
PCDHGC3-201ENST00000308177 PLEKHF1Q96S99 279 aa13.52□□□□□ -0.25
PCDHGC3-201ENST00000308177 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.25
PCDHGC3-201ENST00000308177 PIP4K2AP48426 406 aaPredicted RBP13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 FERMT3Q86UX7 667 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 DDX11Q96FC9 970 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 ABCF2Q9UG63 623 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 CCDC173Q0VFZ6 552 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 ESYT1Q9BSJ8 1104 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 ME1P48163 572 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 TSR1Q2NL82 804 aaKnown RBP13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 CWF19L2Q2TBE0 894 aaKnown RBP13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
PCDHGC3-201ENST00000308177 PLEKHG1Q9ULL1 1385 aa13.5□□□□□ -0.25
PCDHGC3-201ENST00000308177 GOLIM4O00461 696 aa13.5□□□□□ -0.25
PCDHGC3-201ENST00000308177 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms